FC929024
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929024 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2) HSP 1 Score: 143.28 bits (360), Expect = 6.157e-34 Identity = 61/99 (61.62%), Postives = 74/99 (74.75%), Query Frame = 2 Query: 2 ATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPY 298 A+D +SFK+A WFWMT Q PKPSCH VI +W PSA+D AGR+PGYG TNIINGG+ECG G + V +RIGF+ +C G+ GD+LDCYNQRPY Sbjct: 219 ASDATVSFKTAFWFWMTPQSPKPSCHAVITGQWTPSADDQAAGRVPGYGEITNIINGGVECGHGADDKVADRIGFYKRYCDMLGVSYGDNLDCYNQRPY 317
BLAST of FC929024 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 3.056e-33 Identity = 62/100 (62.00%), Postives = 75/100 (75.00%), Query Frame = 2 Query: 2 ATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPYG 301 ATD +SFK+AIWFWMT Q KPS H+VII W PSA D A R+PGYG+ TNIINGGIECG G N AV +RIG++ +CG + PG++LDCYNQR +G Sbjct: 152 ATDATISFKTAIWFWMTPQDNKPSSHDVIIGRWTPSAADQAANRVPGYGVITNIINGGIECGIGRNDAVEDRIGYYRRYCGMLNVAPGENLDCYNQRNFG 251
BLAST of FC929024 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 5.213e-33 Identity = 61/99 (61.62%), Postives = 75/99 (75.76%), Query Frame = 2 Query: 2 ATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPY 298 ATD +SFK+AIWFWMTAQ KPSCH+VI +W PSA D +A R PGYG+ TNIINGGIECG+G N V +RIGF+ +C + PGD+LDCY+QR + Sbjct: 146 ATDATVSFKTAIWFWMTAQGNKPSCHDVITGQWTPSAADASANRQPGYGVITNIINGGIECGKGQNPQVEDRIGFYRRYCTILNVAPGDNLDCYDQRNF 244
BLAST of FC929024 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 6.808e-33 Identity = 62/99 (62.63%), Postives = 74/99 (74.75%), Query Frame = 2 Query: 2 ATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPY 298 ATD +SFK+AIWFWMT Q KPS H+VII W PSA D +A R PG G+ TNIINGGIECG G NAAV +RIG++ +CG + PGD+LDCYNQR + Sbjct: 152 ATDATISFKTAIWFWMTPQDNKPSSHDVIIGSWTPSAADQSANRAPGCGVITNIINGGIECGVGPNAAVEDRIGYYRRYCGMLNVAPGDNLDCYNQRNF 250
BLAST of FC929024 vs. ExPASy Swiss-Prot
Match: CHIC_SECCE (Basic endochitinase C OS=Secale cereale GN=rscc PE=1 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 6.808e-33 Identity = 60/99 (60.61%), Postives = 75/99 (75.76%), Query Frame = 2 Query: 2 ATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPY 298 ATDP +SFK+A+WFWMTAQ PKPS H VI +W PS D AGR PG+G+ TNIINGG+ECG G ++ V +RIGF+ +C G+ GD+LDCYNQRP+ Sbjct: 167 ATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSPSGADRAAGRAPGFGVITNIINGGLECGHGQDSRVADRIGFYKRYCDILGVGYGDNLDCYNQRPF 265
BLAST of FC929024 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 6.808e-33 Identity = 57/99 (57.58%), Postives = 74/99 (74.75%), Query Frame = 2 Query: 2 ATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPY 298 A+D +SFK+A WFWMT Q PKPSCH V+ +W P+ ND AGR+PGYG+ TNIINGG+ECG G ++ V +RIGF+ +C G+ G +LDCYNQRP+ Sbjct: 223 ASDATVSFKTAFWFWMTPQSPKPSCHAVMTGQWTPNGNDQAAGRVPGYGVVTNIINGGVECGHGADSRVADRIGFYKRYCDMLGVSYGANLDCYNQRPF 321
BLAST of FC929024 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 8.891e-33 Identity = 59/100 (59.00%), Postives = 74/100 (74.00%), Query Frame = 2 Query: 2 ATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPYG 301 A D V+SFK+A+WFWMTAQ PKPS H+VI W PS D GR+PG+G+ TNIINGG+EC G NA + NRIGF+ +C G+ PG++LDC NQRP+G Sbjct: 147 ANDAVVSFKTALWFWMTAQQPKPSAHDVITGRWSPSVADSAPGRVPGFGVITNIINGGMECNSGSNALMDNRIGFYRRYCQILGVDPGNNLDCANQRPFG 246
BLAST of FC929024 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 1.517e-32 Identity = 58/99 (58.59%), Postives = 74/99 (74.75%), Query Frame = 2 Query: 2 ATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPY 298 ATDP++SF++AIWFWMTAQ KPSCH VII +W PS D A R+PGYG+ TNIINGG+EC G N AV +RIGF+ +CG + G++LDC NQ+ + Sbjct: 152 ATDPIISFRTAIWFWMTAQDNKPSCHNVIIGQWTPSPADTAANRVPGYGVITNIINGGLECNMGPNTAVESRIGFYRRYCGMLNVPTGENLDCNNQKNF 250
BLAST of FC929024 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 1.981e-32 Identity = 60/99 (60.61%), Postives = 72/99 (72.73%), Query Frame = 2 Query: 2 ATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPY 298 ATD +SFK+A+WFWMT Q KPS H+VI W PS D AGR PGYG+ TNI+NGG+ECG G + V NRIGF+ +CG FGI G +LDCYNQRP+ Sbjct: 231 ATDATVSFKTALWFWMTPQGNKPSSHDVITGRWAPSPADAAAGRAPGYGVITNIVNGGLECGHGPDDRVANRIGFYQRYCGAFGIGTGGNLDCYNQRPF 329
BLAST of FC929024 vs. ExPASy Swiss-Prot
Match: CHI1_HORVU (26 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=4) HSP 1 Score: 137.887 bits (346), Expect = 2.587e-32 Identity = 58/99 (58.59%), Postives = 76/99 (76.77%), Query Frame = 2 Query: 2 ATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPY 298 ATDP +SFK+A+WFWMTAQ PKPS H VI +W PS D AGR+PG+G+ TNI+NGGIECG G ++ V +RIGF+ +C G+ G++LDCY+QRP+ Sbjct: 219 ATDPTVSFKTAMWFWMTAQAPKPSSHAVITGQWSPSGTDRAAGRVPGFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDCYSQRPF 317 The following BLAST results are available for this feature:
BLAST of FC929024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929024 ID=FC929024; Name=FC929024; organism=Citrus clementina; type=EST; length=509bpback to top |