FC929026

Overview
NameFC929026
Unique NameFC929026
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length697
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929026 vs. ExPASy Swiss-Prot
Match: CFI_ELAUM (Chalcone--flavonone isomerase OS=Elaeagnus umbellata GN=CHI PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.894e-12
Identity = 51/159 (32.08%), Postives = 76/159 (47.80%), Query Frame = 2
Query:   17 IKFTAIGVYLDPEILSHLQ-KWKGKQGSSLAQHDDFFDALVSAPVEKFFRIVVIKEIKGSQYGVQLKGAVRDRLAETDKYEE*EESALEKIVEFFQSKYFKNDSVIAYHFPATSPTAEIV--FTNEGK--EDSKIKVENANVVEMIKKWYLGGARGVSP 478
            IKFTAIGVYL+   +  L  KWKGK    L +  +FF  +V+ P+EKF R+  I  + G QY  ++             Y + E  A+EK +E F+ + F      A +    SP   +   F+ +G   E     +EN  + E + +  + G  GVSP
Sbjct:   48 IKFTAIGVYLEDNAVPSLAVKWKGKSAQELTESVEFFRDIVTGPMEKFTRVTTILPLTGQQYSEKVSENCVAAWKSLGIYSDAEAKAIEKFIEIFKDQTF---PPAASNLFTQSPLGSLTMSFSKDGSIPEVGNAVLENKLLSEAVLESII-GKHGVSP 202          
BLAST of FC929026 vs. ExPASy Swiss-Prot
Match: CFI_PYRCO (Chalcone--flavonone isomerase OS=Pyrus communis GN=CHI PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.688e-11
Identity = 51/158 (32.28%), Postives = 78/158 (49.37%), Query Frame = 2
Query:   17 IKFTAIGVYLDPEILSHLQ-KWKGKQGSSLAQHDDFFDALVSAPVEKFFRIVVIKEIKGSQYGVQLKGAVRDRLAETDKYEE*EESALEKIVEFFQSKYF-KNDSVIAYHFPATSPTAEIVFTNEGK--EDSKIKVENANVVEMIKKWYLGGARGVSP 478
            +KFTAIGVYL+   +  L  KWKGK    L++  +FF  +V+ P EKF ++  I  + G QY  ++             Y + E  A+EK +E F+ + F    S++    P  S T  I F+ +    E +   +EN  + E + +  L G  GVSP
Sbjct:   47 VKFTAIGVYLEDNAVPLLAVKWKGKTAEELSESVEFFRDIVTGPFEKFIQVTTILPLTGQQYSEKVSENCVAFWKSVGIYTDAEGKAIEKFIEVFKDQNFPPGASILFTQSPKGSLT--ICFSKDASVPEAANAVIENKLLSEAVLESIL-GKHGVSP 201          
BLAST of FC929026 vs. ExPASy Swiss-Prot
Match: CFI_GOSHI (Chalcone--flavonone isomerase OS=Gossypium hirsutum GN=CHI PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.688e-11
Identity = 49/157 (31.21%), Postives = 76/157 (48.41%), Query Frame = 2
Query:   17 IKFTAIGVYLDPEILSHLQ-KWKGKQGSSLAQHDDFFDALVSAPVEKFFRIVVIKEIKGSQYGVQLKGAVRDRLAETDKYEE*EESALEKIVEFFQSKYFKNDSVIAYHFPATSPTAEIVFTNEGK--EDSKIKVENANVVEMIKKWYLGGARGVSP 478
            IKFTAIGVYL+   ++ L  KWKGK    L +  +FF  +V+   EKF R+ +I  + G QY  ++             Y + E  A+EK +E F+ + F   S I +       +  I F+ +    E  K+ +EN  +   + +  + G  GVSP
Sbjct:   47 IKFTAIGVYLEDSAVNCLGVKWKGKSAVELTESVEFFRDVVTGDFEKFIRVTMILPLTGQQYSEKVSENCVAIWKSLGIYTDAEAKAIEKFIEVFKDENFPPGSSILFTISGQG-SLTIGFSKDSSVPEGGKVVIENKLLANSVLESVI-GKNGVSP 201          
BLAST of FC929026 vs. ExPASy Swiss-Prot
Match: CFI1_PETHY (Chalcone--flavonone isomerase A OS=Petunia hybrida GN=CHI1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.688e-11
Identity = 49/160 (30.63%), Postives = 78/160 (48.75%), Query Frame = 2
Query:   17 IKFTAIGVYLDPEILSHL-QKWKGKQGSSLAQHDDFFDALVSAPVEKFFRIVVIKEIKGSQYGVQLKGAVRDRLAETDKYEE*EESALEKIVEFFQSKYFKNDSVIAYHFPATSPTAEIVFTNEGKEDS-----KIKVENANVVEMIKKWYLGGARGVSP 478
            +KFTAIGVYL+   +  L +KWKGK    L    +FF  +V+ P EKF R+ +I  + G QY  ++             Y + E  A+EK ++ F+S+ F   + I +    T     ++  +  K+DS        +EN  + E + +  + G  GVSP
Sbjct:   47 VKFTAIGVYLEESAIPFLAEKWKGKTPQELTDSVEFFRDVVTGPFEKFTRVTMILPLTGKQYSEKVAENCVAHWKGIGTYTDDEGRAIEKFLDVFRSETFPPGASIMF----TQSPLGLLTISFAKDDSVTGTANAVIENKQLSEAVLESII-GKHGVSP 201          
BLAST of FC929026 vs. ExPASy Swiss-Prot
Match: CFI3_PETHY (Chalcone--flavonone isomerase C OS=Petunia hybrida GN=CHI3 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.204e-11
Identity = 49/160 (30.63%), Postives = 77/160 (48.12%), Query Frame = 2
Query:   17 IKFTAIGVYLDPEILSHL-QKWKGKQGSSLAQHDDFFDALVSAPVEKFFRIVVIKEIKGSQYGVQLKGAVRDRLAETDKYEE*EESALEKIVEFFQSKYFKNDSVIAYHFPATSPTAEIVFTNEGKEDS-----KIKVENANVVEMIKKWYLGGARGVSP 478
            +KFTAIGVYL+   +  L +KWKGK    L    +FF  +V+ P EKF R+  I  + G QY  ++             Y + E  A+EK ++ F+S+ F   + I +    T     ++  +  K+DS        +EN  + E + +  + G  GVSP
Sbjct:   47 VKFTAIGVYLEESAIPFLAEKWKGKTPQELTDSVEFFRDVVTGPFEKFTRVTTILPLTGKQYSEKVAENCVAHWKGIGTYTDDEGRAIEKFLDVFRSETFPPGASIMF----TQSPLGLLTISFAKDDSVTGTANAVIENKQLSEAVLESII-GKHGVSP 201          
BLAST of FC929026 vs. ExPASy Swiss-Prot
Match: CFI_CITSI (Chalcone--flavonone isomerase OS=Citrus sinensis GN=CHI PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.879e-11
Identity = 49/157 (31.21%), Postives = 79/157 (50.32%), Query Frame = 2
Query:   17 IKFTAIGVYLDPEILSHLQ-KWKGKQGSSLAQHDDFFDALVSAPVEKFFRIVVIKEIKGSQYGVQLKGAVRDRLAETDKYEE*EESALEKIVEFFQSKYFKNDSVIAYHFPATSPTAEIVFTNEGK--EDSKIKVENANVVEMIKKWYLGGARGVSP 478
            +KFTAIGVYL+ + +  L  KWKGK    L +  +FF  +V+ P EKF ++ +I  + G+QY  ++             Y + E  A+EK  E F+ + F   S I   F  +  +  I F+ +G   +D    +E+  + E + +  + G  GVSP
Sbjct:   47 VKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSIL--FTQSPGSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMI-GKNGVSP 200          
BLAST of FC929026 vs. ExPASy Swiss-Prot
Match: CFI2_FRAAN (Chalcone--flavonone isomerase 2 OS=Fragaria ananassa GN=CHI2 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.879e-11
Identity = 48/159 (30.19%), Postives = 80/159 (50.31%), Query Frame = 2
Query:   17 IKFTAIGVYLDPEILSHLQ-KWKGKQGSSLAQHDDFFDALVSAPVEKFFRIVVIKEIKGSQYGVQLKGAVRDRLAETDKYEE*EESALEKIVEFFQSKYFKNDSVIAYHFPATSPTAEIV--FTNEGK--EDSKIKVENANVVEMIKKWYLGGARGVSP 478
            +KFTAIGVYL+ + +  L  KWKGK    L +  +FF  +V+ P EKF ++ +I  + G QY  ++         +   Y + E  A+EK +E F+ + F   + I +     SP   ++   + +G   E     +EN  + E + +  + G +GVSP
Sbjct:   45 VKFTAIGVYLEDKAVPALSVKWKGKTAEELTESVEFFREIVTGPFEKFTQVTMILPLTGQQYSEKVSENCVAIWKKFGIYTDAEAKAIEKFIEVFKDQTFPPGASILF---TQSPNGSLMIGISKDGSIPEVGNAVIENKLLSESVLESII-GKQGVSP 199          
BLAST of FC929026 vs. ExPASy Swiss-Prot
Match: CFI_HORVU (Chalcone--flavonone isomerase OS=Hordeum vulgare GN=CHI PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.760e-11
Identity = 52/161 (32.30%), Postives = 76/161 (47.20%), Query Frame = 2
Query:    5 HFLQIKFTAIGVYL--DPEILSHLQKWKGKQGSSLAQHDDFFDALVSAPVEKFFRIVVIKEIKGSQYGVQLKGAVRDRLAETDKYEE*EESALEKIVEFFQSKYF-KNDSVIAYHFPATSPTAEIVFTNEGKEDSKIKVENANVVEMIKKWYLGGARGVSP 478
            HF  IKFTAIGVYL  D  + +   KW GK  + LA    FF  +V+   EKF R+ +I  + G+QY  ++             Y + E +A++K  E F    F    S++  H PA   T      +   E   + +ENA + E + +  + G  GVSP
Sbjct:   41 HF--IKFTAIGVYLQADAAVSALAAKWAGKPAADLASDAAFFRDVVTGEFEKFTRVTMILPLTGAQYSDKVTENCVAYWKAAGVYTDAEAAAVDKFKEAFGPHSFAPGASILFTHSPAGVLTVAFSKDSSVPESGGVAIENARLCEAVLESII-GEHGVSP 198          
BLAST of FC929026 vs. ExPASy Swiss-Prot
Match: CFI1_FRAAN (Chalcone--flavonone isomerase 1 OS=Fragaria ananassa GN=CHI1 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.760e-11
Identity = 51/158 (32.28%), Postives = 80/158 (50.63%), Query Frame = 2
Query:   17 IKFTAIGVYLDPEILSHLQ-KWKGKQGSSLAQHDDFFDALVSAPVEKFFRIVVIKEIKGSQYGVQLKGAVRDRLAETDKYEE*EESALEKIVEFFQSKYF-KNDSVIAYHFPATSPTAEIVFTNEG--KEDSKIKVENANVVEMIKKWYLGGARGVSP 478
            +KFTAIGVYL+ + +  L  KWKGK    L +  +FF  +V+ P EKF ++ +I  + G QY  ++         +   Y + E  A+EK +E F+ + F    S++    P  S T  I F+ +G   E     +EN  + E + +  + G  GVSP
Sbjct:   45 VKFTAIGVYLEDKAVPALAVKWKGKTAEELTESVEFFREIVTGPFEKFTQVTMILPLTGQQYSEKVSENCVAIWKKFGIYTDAEAKAIEKFIEVFKDQTFPPGASILFTQSPDGSLT--IGFSKDGCIPEVGNAVIENKLLSESVLESII-GKPGVSP 199          
BLAST of FC929026 vs. ExPASy Swiss-Prot
Match: CFI_CLITE (Chalcone--flavonone isomerase OS=Clitoria ternatea GN=CHI PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.910e-11
Identity = 46/155 (29.68%), Postives = 72/155 (46.45%), Query Frame = 2
Query:   17 IKFTAIGVYLDPEILSHLQ-KWKGKQGSSLAQHDDFFDALVSAPVEKFFRIVVIKEIKGSQYGVQLKGAVRDRLAETDKYEE*EESALEKIVEFFQSKYFKNDSVIAYHFPATSPTAEIVFTNEGKEDSKIKVENANVVEMIKKWYLGGARGVSP 478
            +KFTAIG+YL  + L  L  KW GK    L +  +FF  +V+ P EKF ++ +I  + G QY  ++             Y + E  A++K V  F+ + F   S I +     SP   +  T      +   +EN  + E + +  + G  GVSP
Sbjct:   47 VKFTAIGIYLHDDALPFLAAKWNGKSDHELTESVEFFRDIVTGPFEKFMQVTMILPLTGQQYSEKVSENCVAIWKSLGIYTDAEAKAIDKFVSVFKDETFPPGSSILF---TVSPKGSLGITFSKDGSTTTVIENKLLSEAVLESMI-GKHGVSP 197          
The following BLAST results are available for this feature:
BLAST of FC929026 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
CFI_ELAUM9.894e-1232.08Chalcone--flavonone isomerase OS=Elaeagnus umbella... [more]
CFI_PYRCO1.688e-1132.28Chalcone--flavonone isomerase OS=Pyrus communis GN... [more]
CFI_GOSHI1.688e-1131.21Chalcone--flavonone isomerase OS=Gossypium hirsutu... [more]
CFI1_PETHY1.688e-1130.63Chalcone--flavonone isomerase A OS=Petunia hybrida... [more]
CFI3_PETHY2.204e-1130.63Chalcone--flavonone isomerase C OS=Petunia hybrida... [more]
CFI_CITSI2.879e-1131.21Chalcone--flavonone isomerase OS=Citrus sinensis G... [more]
CFI2_FRAAN2.879e-1130.19Chalcone--flavonone isomerase 2 OS=Fragaria ananas... [more]
CFI_HORVU3.760e-1132.30Chalcone--flavonone isomerase OS=Hordeum vulgare G... [more]
CFI1_FRAAN3.760e-1132.28Chalcone--flavonone isomerase 1 OS=Fragaria ananas... [more]
CFI_CLITE4.910e-1129.68Chalcone--flavonone isomerase OS=Clitoria ternatea... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1DB07RM2 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH1DB07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929026 ID=FC929026; Name=FC929026; organism=Citrus clementina; type=EST; length=697bp
GATACACTTTCTCCAAATCAAGTTCACGGCAATTGGAGTCTACTTGGATC
CTGAAATTTTGAGTCACTTGCAAAAGTGGAAGGGCAAACAGGGAAGTTCC
CTTGCACAACATGATGACTTCTTTGATGCTCTTGTCTCTGCTCCAGTAGA
GAAATTTTTTAGAATTGTTGTGATCAAGGAGATCAAGGGGTCACAATATG
GGGTTCAGTTAAAAGGTGCGGTGAGGGACAGATTGGCCGAAACTGACAAA
TATGAAGAATAGGAAGAATCTGCCCTTGAGAAAATCGTTGAATTCTTCCA
ATCCAAGTATTTTAAAAATGACTCTGTGATTGCTTATCATTTTCCAGCAA
CATCCCCTACTGCAGAGATAGTGTTTACAAATGAAGGAAAGGAGGACTCA
AAAATCAAAGTGGAGAATGCGAATGTGGTTGAGATGATCAAGAAATGGTA
CTTGGGTGGAGCAAGGGGAGTGTCTCCTACAACAACATCATCTCTAGCCA
ATACTCTCTCAGCTGAGTTATCAAAATGAAGCAGCTCTGCGCTTTCTAAT
AAAAGTGCTTCTTCACTTGGGTTTTGGAATTGCTGTACATTTGTGGAATT
TGAATGACGTGTTTACCCCGCATCCATGCTTCTATTTTAATGAAAATTTG
CTTTGCTAAAGTCCTTCACGAAAAAAAAAAAAAAAAAAAAAAAAAAA
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