FC929039

Overview
NameFC929039
Unique NameFC929039
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length767
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929039 vs. ExPASy Swiss-Prot
Match: THS3_VITVI (Stilbene synthase 3 (Fragment) OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 367.466 bits (942), Expect = 4.620e-101
Identity = 178/247 (72.06%), Postives = 209/247 (84.62%), Query Frame = 3
Query:   27 VQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDS 767
            V+EIRNAQRA GPAT+LAIGTATP H V Q+DY DYYFR+TKSE M+ELK+KF R+CDKSMIKKRY++LTEE+L+E+PN+ AYMAPSL+ RQ+I+  EVPKLGKEAA KA+KEWGQPKSKITHL+FCTTSGV+MPGADY+L  L+GL  SV+R M+Y QGC+AGGTVLR AKDLAENN GARVLVVCSEIT VTFRGP++  LDSLVGQALF            PD S+ERPL+QLVS +QT +P+S
Sbjct:    1 VEEIRNAQRAKGPATILAIGTATPDHCVYQSDYADYYFRVTKSEPMSELKKKFNRICDKSMIKKRYIHLTEEMLEEHPNIGAYMAPSLNIRQEIITAEVPKLGKEAALKALKEWGQPKSKITHLVFCTTSGVEMPGADYKLANLLGLETSVRRVMLYHQGCYAGGTVLRTAKDLAENNAGARVLVVCSEITVVTFRGPSEDALDSLVGQALFGDGSAAVIVGSDPDVSIERPLFQLVSAAQTFIPNS 247          
BLAST of FC929039 vs. ExPASy Swiss-Prot
Match: CHS2_HORVU (Chalcone synthase 2 OS=Hordeum vulgare GN=CHS2 PE=2 SV=1)

HSP 1 Score: 361.303 bits (926), Expect = 3.311e-99
Identity = 178/247 (72.06%), Postives = 206/247 (83.40%), Query Frame = 3
Query:   27 VQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDS 767
            ++E+R AQRA+G ATVLAIGTA PA+ V QA YPDYYFR+TKSEH+ +LKEKF+RMCDKSMI+KR+M+LTEEIL +NP +CA+M  SLDAR  I +VEVPKLG+ AA KAIKEWGQP SKITHL+FCTTSGVDMPGADYQLTKL+GL P+VKR MMYQQGCF G TVLRLAKD+AENN+GARVLVVCSEITA+ FRGP  +HLDSLVG ALF            PD   E+P++QLVS SQTILP+S
Sbjct:    6 LKEVRMAQRAEGLATVLAIGTAVPANCVYQATYPDYYFRVTKSEHLADLKEKFQRMCDKSMIRKRHMHLTEEILIKNPKICAHMETSLDARHAIALVEVPKLGQGAAEKAIKEWGQPLSKITHLVFCTTSGVDMPGADYQLTKLLGLSPTVKRLMMYQQGCFGGATVLRLAKDIAENNRGARVLVVCSEITAMAFRGPCKSHLDSLVGHALFGDGAAAAIIGADPDQLDEQPVFQLVSASQTILPES 252          
BLAST of FC929039 vs. ExPASy Swiss-Prot
Match: 2PS_GERHY (2-pyrone synthase OS=Gerbera hybrida GN=2PS PE=1 SV=2)

HSP 1 Score: 358.992 bits (920), Expect = 1.643e-98
Identity = 175/247 (70.85%), Postives = 203/247 (82.19%), Query Frame = 3
Query:   27 VQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDS 767
            V+ IR A RA G AT+LAIGTATP + V QADY DYYFR+TKSEHM +LKEKFKR+C+K+ IKKRY+ LTE+ L+ENP MC +MAPSL+ARQD+VV  VP LGKEAA KAI EWG PKSKITHLIFCTT+GVDMPGADYQL KL+GL PSVKR+M+YQQGC AGGTVLRLAKDLAENNKG+RVL+VCSEITA+ F GP + HLDSLV QALF            P  +VERP++++VST QTILPD+
Sbjct:    9 VEVIREAGRAQGLATILAIGTATPPNCVAQADYADYYFRVTKSEHMVDLKEKFKRICEKTAIKKRYLALTEDYLQENPTMCEFMAPSLNARQDLVVTGVPMLGKEAAVKAIDEWGLPKSKITHLIFCTTAGVDMPGADYQLVKLLGLSPSVKRYMLYQQGCAAGGTVLRLAKDLAENNKGSRVLIVCSEITAILFHGPNENHLDSLVAQALFGDGAAALIVGSGPHLAVERPIFEIVSTDQTILPDT 255          
BLAST of FC929039 vs. ExPASy Swiss-Prot
Match: ACS2_RUTGR (Acridone synthase 2 OS=Ruta graveolens GN=ACS2 PE=1 SV=1)

HSP 1 Score: 358.221 bits (918), Expect = 2.803e-98
Identity = 172/250 (68.80%), Postives = 207/250 (82.80%), Query Frame = 3
Query:   18 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDS 767
            M +++E+R AQ+++GPA +LAIGTATP +   QADYPDYYF+ITKSEHMTELK+KFK +C+KSMI+KR+M  ++E LK NP +C +M  SL+ARQDI VVE P++GKEAA KAIKEWG PKS ITHLIFCT++GVDMPGADYQLT+++GL PSVKR M+YQQGC+AGGTVLRLAKDLAENNKG+RVLVVCSE+TA TFRGP+   +DSLVGQALF            PDTSVER LY +VS SQ +LPDS
Sbjct:    1 MESLKEMRKAQKSEGPAAILAIGTATPDNVYIQADYPDYYFKITKSEHMTELKDKFKTLCEKSMIRKRHMCFSQEFLKANPEVCKHMGKSLNARQDIAVVETPRIGKEAAVKAIKEWGHPKSSITHLIFCTSAGVDMPGADYQLTRMLGLNPSVKRMMIYQQGCYAGGTVLRLAKDLAENNKGSRVLVVCSELTAPTFRGPSPDAVDSLVGQALFADGAAALVVGADPDTSVERALYYIVSASQMLLPDS 250          
BLAST of FC929039 vs. ExPASy Swiss-Prot
Match: THS3_ARAHY (Stilbene synthase 3 OS=Arachis hypogaea PE=2 SV=1)

HSP 1 Score: 357.066 bits (915), Expect = 6.245e-98
Identity = 171/250 (68.40%), Postives = 206/250 (82.40%), Query Frame = 3
Query:   18 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDS 767
            M +V  IR  QRA+GPATVLAIGTA P + ++Q+ Y DYYFR+T SEHMT+LK+KF+R+C+++ IK R+MYLTEEILKENPNMCAY APSLDAR+D+++ EVP++GKEAATKAIKEWGQP SKITHLIFCTTSGV +PG DY+L  L+GL P VKR+MMY QGCFAGGTVLRLAKDLAENNK ARVL+VCSE TAVTFRGP++T +DSLVGQALF            P   VE+P+++LVST Q ++P S
Sbjct:    1 MVSVSGIRKVQRAEGPATVLAIGTANPPNCIDQSTYADYYFRVTNSEHMTDLKKKFQRICERTQIKNRHMYLTEEILKENPNMCAYKAPSLDAREDMMIREVPRVGKEAATKAIKEWGQPMSKITHLIFCTTSGVALPGVDYELIVLLGLDPCVKRYMMYHQGCFAGGTVLRLAKDLAENNKDARVLIVCSENTAVTFRGPSETDMDSLVGQALFADGAAAIIIGSDPVPEVEKPIFELVSTDQKLVPGS 250          
BLAST of FC929039 vs. ExPASy Swiss-Prot
Match: THS1_ARAHY (Stilbene synthase 1 OS=Arachis hypogaea PE=2 SV=1)

HSP 1 Score: 355.91 bits (912), Expect = 1.391e-97
Identity = 171/250 (68.40%), Postives = 205/250 (82.00%), Query Frame = 3
Query:   18 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDS 767
            M +V  IR  QRA+GPATVLAIGTA P + V+Q+ Y DYYFR+T  EHMT+LK+KF+R+C+++ IK R+MYLTEEILKENPNMCAY APSLDAR+D+++ EVP++GKEAATKAIKEWGQP SKITHLIFCTTSGV +PG DY+L  L+GL PSVKR+MMY QGCFAGGTVLRLAKDLAENNK ARVL+VCSE TAVTFRGP +T +DSLVGQALF            P   VE P++++VST Q ++P+S
Sbjct:    1 MVSVSGIRKVQRAEGPATVLAIGTANPPNCVDQSTYADYYFRVTNGEHMTDLKKKFQRICERTQIKNRHMYLTEEILKENPNMCAYKAPSLDAREDMMIREVPRVGKEAATKAIKEWGQPMSKITHLIFCTTSGVALPGVDYELIVLLGLDPSVKRYMMYHQGCFAGGTVLRLAKDLAENNKDARVLIVCSENTAVTFRGPNETDMDSLVGQALFADGAAAIIIGSDPVPEVENPIFEIVSTDQQLVPNS 250          
BLAST of FC929039 vs. ExPASy Swiss-Prot
Match: CHSY_EQUAR (Chalcone synthase OS=Equisetum arvense GN=CHS PE=2 SV=1)

HSP 1 Score: 352.443 bits (903), Expect = 1.538e-96
Identity = 179/251 (71.31%), Postives = 198/251 (78.88%), Query Frame = 3
Query:   15 EMATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDS 767
            E A     R AQRA+GPATVLAIGTA PA+   Q+ YPD+YF IT S+HMTELK KF RMC KS IKKRYM+L  EILK NP++CAY   SLD RQDI VVEVPKLGKEA+ KAIKEWGQPKSKITHL+FCTTSGVDMPGAD+ LTKL+GLRPSVKR MMYQQGCFAGGTVLR+AKD+AENNKGARVLVVCSEIT VTFRGP++THLDSLVGQALF            P    E P ++L  +   ILPDS
Sbjct:    6 ESADASSRRLAQRANGPATVLAIGTANPANVFEQSSYPDFYFDITNSQHMTELKLKFSRMCQKSGIKKRYMHLNSEILKANPSLCAYWEKSLDVRQDIAVVEVPKLGKEASLKAIKEWGQPKSKITHLVFCTTSGVDMPGADWALTKLLGLRPSVKRLMMYQQGCFAGGTVLRVAKDVAENNKGARVLVVCSEITCVTFRGPSETHLDSLVGQALFGDGAAAVILGSDP-LPEENPCFELHWSGSNILPDS 255          
BLAST of FC929039 vs. ExPASy Swiss-Prot
Match: ACS3_RUTGR (Probable acridone synthase 3 OS=Ruta graveolens GN=ACS3 PE=2 SV=1)

HSP 1 Score: 352.443 bits (903), Expect = 1.538e-96
Identity = 169/250 (67.60%), Postives = 205/250 (82.00%), Query Frame = 3
Query:   18 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDS 767
            M +++E+R AQ ++GPA +LAIGTA P +   QADYPDYYF++TKSEHMTELK+KF+ +C+KSMI+KR+M  +EE LK NP +C +M  SL+ARQDI VVE P+LG EAA KAIKEWGQPKS ITHLIFC+++GVDMPGADYQLT+++GL PSVKR M+YQQGC+AGGTVLRLAKDLAENNKG+RVLVVCSE+TA TFRGP+   +DSLVGQALF            PD+S+ER LY LVS SQ +LPDS
Sbjct:    1 MESLKEMRKAQMSEGPAAILAIGTANPDNVYMQADYPDYYFKMTKSEHMTELKDKFRTLCEKSMIRKRHMCFSEEFLKANPEVCKHMGKSLNARQDIAVVETPRLGNEAAVKAIKEWGQPKSSITHLIFCSSAGVDMPGADYQLTRILGLNPSVKRMMIYQQGCYAGGTVLRLAKDLAENNKGSRVLVVCSELTAPTFRGPSPDAVDSLVGQALFADGAAALVVGADPDSSIERALYYLVSASQMLLPDS 250          
BLAST of FC929039 vs. ExPASy Swiss-Prot
Match: ACS4_RUTGR (Probable acridone synthase 4 OS=Ruta graveolens GN=ACS4 PE=2 SV=1)

HSP 1 Score: 351.673 bits (901), Expect = 2.624e-96
Identity = 170/250 (68.00%), Postives = 205/250 (82.00%), Query Frame = 3
Query:   18 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDS 767
            M +++E+R AQ ++GPA +LAIGTATP +   QADYPDYYFR+TKSEHMTELK+KF+ +C+KSMI+KR+M  +EE LK NP +  +M  SL+ARQDI VVE P+LG EAA KAIKEWGQPKS ITHLIFC+++GVDMPGADYQLT+++GL PSVKR M+YQQGC+AGGTVLRLAKDLAENNKG+RVLVVCSE+TA TFRGP+   +DSLVGQALF            PD+S+ER LY LVS SQ +LPDS
Sbjct:    1 MESLKEMRKAQMSEGPAAILAIGTATPNNVYMQADYPDYYFRMTKSEHMTELKDKFRTLCEKSMIRKRHMCFSEEFLKANPEVSKHMGKSLNARQDIAVVETPRLGNEAAVKAIKEWGQPKSSITHLIFCSSAGVDMPGADYQLTRILGLNPSVKRMMVYQQGCYAGGTVLRLAKDLAENNKGSRVLVVCSELTAPTFRGPSPDAVDSLVGQALFADGAAALVVGADPDSSIERALYYLVSASQMLLPDS 250          
BLAST of FC929039 vs. ExPASy Swiss-Prot
Match: CHSG_PETHY (Chalcone synthase G OS=Petunia hybrida GN=CHSG PE=2 SV=2)

HSP 1 Score: 343.584 bits (880), Expect = 7.145e-94
Identity = 171/253 (67.59%), Postives = 205/253 (81.03%), Query Frame = 3
Query:   18 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPA--DT-HLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDS 767
            MATV+EIR AQRA+GPATVLAIGTA P++ V+Q+ YPD+ FRIT S+H TELKEKFK MC+ SMIKKRY++LTEEILK NPN+C + APSL+ARQ+I V E PKLGK AA KAI+EW Q KSKITHL+FCTT+ V++PGADYQLTKL+GL PSVKR MMYQQGC+ GGT LRLAKDLAENNKGARVLVVC EIT ++F+ P+  DT  LD LVGQALF            P  ++E+PL++LV  +QT++PDS
Sbjct:    1 MATVEEIRKAQRAEGPATVLAIGTANPSNCVDQSAYPDFLFRITTSDHKTELKEKFKHMCEGSMIKKRYLHLTEEILKNNPNICEHKAPSLNARQEIAVAEAPKLGKRAAQKAIEEWSQSKSKITHLVFCTTTSVELPGADYQLTKLLGLSPSVKRSMMYQQGCYGGGTALRLAKDLAENNKGARVLVVCVEITVMSFQAPSRNDTDELDVLVGQALFADGASAVIIGSDPILAIEKPLFELVFATQTLIPDS 253          
The following BLAST results are available for this feature:
BLAST of FC929039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
THS3_VITVI4.620e-10172.06Stilbene synthase 3 (Fragment) OS=Vitis vinifera P... [more]
CHS2_HORVU3.311e-9972.06Chalcone synthase 2 OS=Hordeum vulgare GN=CHS2 PE=... [more]
2PS_GERHY1.643e-9870.852-pyrone synthase OS=Gerbera hybrida GN=2PS PE=1 S... [more]
ACS2_RUTGR2.803e-9868.80Acridone synthase 2 OS=Ruta graveolens GN=ACS2 PE=... [more]
THS3_ARAHY6.245e-9868.40Stilbene synthase 3 OS=Arachis hypogaea PE=2 SV=1[more]
THS1_ARAHY1.391e-9768.40Stilbene synthase 1 OS=Arachis hypogaea PE=2 SV=1[more]
CHSY_EQUAR1.538e-9671.31Chalcone synthase OS=Equisetum arvense GN=CHS PE=2... [more]
ACS3_RUTGR1.538e-9667.60Probable acridone synthase 3 OS=Ruta graveolens GN... [more]
ACS4_RUTGR2.624e-9668.00Probable acridone synthase 4 OS=Ruta graveolens GN... [more]
CHSG_PETHY7.145e-9467.59Chalcone synthase G OS=Petunia hybrida GN=CHSG PE=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1DC09RM2 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH1DC09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929039 ID=FC929039; Name=FC929039; organism=Citrus clementina; type=EST; length=767bp
TAAGGGTTCAACTTGAAATGGCAACCGTTCAAGAGATCAGAAACGCTCAG
CGTGCCGACGGCCCGGCCACCGTCCTCGCCATCGGTACGGCCACGCCTGC
CCACAGTGTCAACCAGGCTGATTATCCCGACTATTACTTCAGGATCACAA
AGAGCGAGCATATGACGGAGCTTAAAGAGAAGTTCAAGCGCATGTGTGAC
AAGTCGATGATTAAGAAGCGTTACATGTACTTAACGGAAGAGATTTTGAA
GGAAAACCCCAACATGTGCGCTTACATGGCTCCATCACTCGACGCACGTC
AAGACATTGTGGTGGTCGAAGTGCCGAAGCTCGGGAAAGAAGCTGCTACA
AAGGCCATCAAAGAATGGGGCCAGCCCAAGTCTAAGATCACCCACCTCAT
CTTCTGCACCACCTCCGGCGTCGACATGCCCGGCGCCGACTACCAGCTCA
CCAAACTGATCGGCCTGCGCCCCTCCGTCAAGCGCTTCATGATGTACCAA
CAAGGATGTTTCGCCGGTGGCACTGTTCTTCGCCTCGCTAAAGACTTGGC
TGAGAACAACAAGGGCGCTCGCGTTCTTGTTGTCTGTTCGGAGATCACGG
CGGTCACTTTCCGCGGCCCTGCCGATACTCATCTTGATTCTCTTGTGGGC
CAGGCTTTGTTCGGTGATGGTGCTGCTGCTGTGATCGTGGGTGCCGATCC
TGACACGTCGGTCGAGCGTCCGTTGTATCAGCTCGTGTCGACTTCGCAGA
CGATCCTCCCTGACTCT
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