FC929045

Overview
NameFC929045
Unique NameFC929045
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length847
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: WAKLL_ARATH (Putative wall-associated receptor kinase-like 13 OS=Arabidopsis thaliana GN=WAKL13 PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.971e-20
Identity = 57/151 (37.75%), Postives = 92/151 (60.93%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKEKLK--WGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTE 843
            K+FS  EL+ AT+NF+   +IG+GG   VYKG L +G+ VA+K+ +    ++ + +F++E+ I++ ++H +  KLLG  +E  + I V E  PNG+L   L+   +     WG+R +IA+ ++    YLH      I HRDIK+ +ILL E
Sbjct:  440 KLFSSRELEKATDNFNDNRVIGQGGQGTVYKGMLVDGRSVAVKK-SNVVDEDKLQEFINEVIILSQINHRHVVKLLGCCLETEVPILVYEFIPNGNLFQHLHEEFDDYTALWGVRMRIAVDISGAFSYLHTAACSPIYHRDIKSTNILLDE 589          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: SIRK_ARATH (Senescence-induced receptor-like serine/threonine-protein kinase OS=Arabidopsis thaliana GN=SIRK PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.971e-20
Identity = 60/154 (38.96%), Postives = 90/154 (58.44%), Query Frame = 1
Query:  388 QSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIE-GGMHIVLELSPNGSLASLLYGMKEK-LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTE 843
            ++ ++ F   E+ + TNNF  E +IGKGG+ +VY G + NG+ VA+K L+  +A     +F +E+ ++  V H N   L+GY  E   M ++ E   N +L   L G +   L W  R KI+L  A+GL YLH GC+  I+HRD+K  +ILL E
Sbjct:  558 KTAKRYFKYSEVVNITNNF--ERVIGKGGFGKVYHGVI-NGEQVAVKVLSEESAQGY-KEFRAEVDLLMRVHHTNLTSLVGYCNEINHMVLIYEYMANENLGDYLAGKRSFILSWEERLKISLDAAQGLEYLHNGCKPPIVHRDVKPTNILLNE 707          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: RPK2_ARATH (LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana GN=RPK2 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.971e-20
Identity = 53/140 (37.86%), Postives = 78/140 (55.71%), Query Frame = 1
Query:  430 ATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGY-GIEGGMHIVLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            AT NF+  NLIG GG+   YK  +    +VAIKRL+ G    +   F +E+  +  + HPN   L+GY   E  M +V    P G+L   +     +  W + +KIAL +A  L YLH+ C  R++HRD+K ++ILL +D
Sbjct:  870 ATGNFNASNLIGNGGFGATYKAEISQDVVVAIKRLSIGRFQGV-QQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLVYNYLPGGNLEKFIQERSTR-DWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDD 1007          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: Y1839_ARATH (Probable serine/threonine-protein kinase At1g18390 OS=Arabidopsis thaliana GN=At1g18390 PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 1.041e-19
Identity = 69/193 (35.75%), Postives = 102/193 (52.85%), Query Frame = 1
Query:  313 SIRRSSSMREGIDMPRNLF----VNSYDSQSPQK------IFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHIVL--ELSPNGSLASLLYGMK---EKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            S R SS++     +PRN+       S+D +  ++      IFS  EL+ ATNNF     +G GG+  VY G+L++G+ VA+KRL           F +E+ I+  + HPN   L G   +    ++L  E   NG+LA  L+G +     L W IR KIA+  A  L YLH     +IIHRD+K+ +ILL ++
Sbjct:  296 SYRNSSAL-----LPRNISSDPSAKSFDIEKAEELLVGVHIFSYEELEEATNNFDPSKELGDGGFGTVYYGKLKDGRSVAVKRLYDNNFKR-AEQFRNEVEILTGLRHPNLVALFGCSSKQSRDLLLVYEYVANGTLADHLHGPQANPSSLPWSIRLKIAVETASALKYLHAS---KIIHRDVKSNNILLDQN 479          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: Y1105_ARATH (Probable receptor-like protein kinase At1g11050 OS=Arabidopsis thaliana GN=At1g11050 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.360e-19
Identity = 60/156 (38.46%), Postives = 89/156 (57.05%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGI-----EGGMHIVLELSPNGSLASLLY----GMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            F + EL+ ATNNFS +N IG+GG+  VYKG L +G ++A+K++   +  +  A+F +E+ I++++ H N   L G  +     E   ++V +   NG+L   L+      K  L W  R  I L VA+GL YLH G +  I HRDIK  +ILL  D
Sbjct:  283 FKIEELEKATNNFSQKNFIGRGGFGFVYKGVLPDGSVIAVKKVIE-SEFQGDAEFRNEVEIISNLKHRNLVPLRGCSMVDDDSESQRYLVYDYMSNGNLDDHLFPRGETTKMPLSWPQRKSIILDVAKGLAYLHYGVKPAIYHRDIKGTNILLDVD 437          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: WAK1_ARATH (Wall-associated receptor kinase 1 OS=Arabidopsis thaliana GN=WAK1 PE=1 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.360e-19
Identity = 58/149 (38.93%), Postives = 88/149 (59.06%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYG--MKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILL 837
            KIF+   ++ ATN ++   ++G+GG   VYKG L +  +VAIK+   G + ++   F++E+ +++ ++H N  KLLG  +E  + + V E   NG+L   L+G  +   L W  R KIA+ VA  L YLH      IIHRDIK A+ILL
Sbjct:  395 KIFTEDGMKKATNGYAESRILGQGGQGTVYKGILPDNSIVAIKKARLGDSSQV-EQFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFITNGTLFDHLHGSMIDSSLTWEHRLKIAIEVAGTLAYLHSSASIPIIHRDIKTANILL 542          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: LRKA2_ARATH (Lectin-domain containing receptor kinase A4.2 OS=Arabidopsis thaliana GN=LECRKA4.2 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.360e-19
Identity = 51/150 (34.00%), Postives = 89/150 (59.33%), Query Frame = 1
Query:  418 ELQSATNNFSFENLIGKGGYAEVYKGRLRN--GQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIE-GGMHIVLELSPNGSLASLLYGMKEK----LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            +L +AT+ F    ++G GG+  V++G L +     +A+K++T  +   +  +F++E+  +  + H N   L G+  +   + ++ +  PNGSL SLLY    +    L W  R+KIA G+A GLLYLHE  ++ +IHRDIK +++L+ +D
Sbjct:  353 DLYAATDGFKENRIVGTGGFGTVFRGNLSSPSSDQIAVKKITPNSMQGV-REFIAEIESLGRLRHKNLVNLQGWCKQKNDLLLIYDYIPNGSLDSLLYSRPRQSGVVLSWNARFKIAKGIASGLLYLHEEWEKVVIHRDIKPSNVLIEDD 501          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: IRAK4_BOVIN (Interleukin-1 receptor-associated kinase 4 OS=Bos taurus GN=IRAK4 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.360e-19
Identity = 65/159 (40.88%), Postives = 88/159 (55.35%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFE------NLIGKGGYAEVYKGRLRNGQLVAIKRLTRG---TADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGG-MHIVLELSPNGSLASLLYGMK--EKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            FS +EL+  TNNF         N +G+GG+  VYKG + N + VA+K+L      + +E+   F  E+ +MA   H N  +LLG+  +G  + +V    PNGSL   L  +     L W +R KIA G A GL YLHE      IHRDIK+A+ILL ED
Sbjct:  169 FSFFELKDVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-RTVAVKKLAAMVDISTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWNMRCKIAQGAANGLSYLHE---NHHIHRDIKSANILLDED 323          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: Y2232_ARATH (Probable receptor-like protein kinase At2g23200 OS=Arabidopsis thaliana GN=At2g23200 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.776e-19
Identity = 60/145 (41.38%), Postives = 83/145 (57.24%), Query Frame = 1
Query:  418 ELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGG-MHIVLELSPNGSLASLLYGMK-EKLKWGIRYKIALGVAEGLLYLH-EGCQRRIIHRDIKAAHILLTE 843
            ++ SATNNF  + LIGKGG+  VYK  L +G   AIKR   G+   I+ +F +E+ +++ + H +   L GY  E   M +V E    G+L   LYG     L W  R +I +G A GL YLH  G +  IIHRD+K+ +ILL E
Sbjct:  480 DILSATNNFDEQLLIGKGGFGYVYKAILPDGTKAAIKRGKTGSGQGIL-EFQTEIQVLSRIRHRHLVSLTGYCEENSEMILVYEFMEKGTLKEHLYGSNLPSLTWKQRLEICIGAARGLDYLHSSGSEGAIIHRDVKSTNILLDE 623          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: Y1755_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07550 OS=Arabidopsis thaliana GN=At1g07550 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.776e-19
Identity = 60/156 (38.46%), Postives = 90/156 (57.69%), Query Frame = 1
Query:  388 QSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGY-GIEGGMHIVLELSPNGSLASLLYGMK--EKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            +S  + F+  ++   TNNF    +IGKGG+  VY+G L N Q  AIK L+  +A     +F +E+ ++  V H     L+GY   + G+ ++ EL   G+L   L G      L W IR KIAL  A G+ YLH GC+ +I+HRD+K+ +ILL+E+
Sbjct:  544 KSENRRFTYSDVNKMTNNFQV--VIGKGGFGVVYQGCLNNEQ-AAIKVLSHSSAQGY-KEFKTEVELLLRVHHEKLVSLIGYCDDDNGLALIYELMGKGNLKEHLSGKPGCSVLSWPIRLKIALESAIGIEYLHTGCKPKIVHRDVKSTNILLSEE 695          
The following BLAST results are available for this feature:
BLAST of FC929045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 294
Match NameE-valueIdentityDescription
WAKLL_ARATH7.971e-2037.75Putative wall-associated receptor kinase-like 13 O... [more]
SIRK_ARATH7.971e-2038.96Senescence-induced receptor-like serine/threonine-... [more]
RPK2_ARATH7.971e-2037.86LRR receptor-like serine/threonine-protein kinase ... [more]
Y1839_ARATH1.041e-1935.75Probable serine/threonine-protein kinase At1g18390... [more]
Y1105_ARATH1.360e-1938.46Probable receptor-like protein kinase At1g11050 OS... [more]
WAK1_ARATH1.360e-1938.93Wall-associated receptor kinase 1 OS=Arabidopsis t... [more]
LRKA2_ARATH1.360e-1934.00Lectin-domain containing receptor kinase A4.2 OS=A... [more]
IRAK4_BOVIN1.360e-1940.88Interleukin-1 receptor-associated kinase 4 OS=Bos ... [more]
Y2232_ARATH1.776e-1941.38Probable receptor-like protein kinase At2g23200 OS... [more]
Y1755_ARATH1.776e-1938.46Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1DD03RM2 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH1DD03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929045 ID=FC929045; Name=FC929045; organism=Citrus clementina; type=EST; length=847bp
ATTTTAGTTTCTTTTTTGACTGAGATAAGAGGACGGGACAAAGAAACAGA
ATTTAGAATGCTCTGTTCTCATCCCCTGTTTCTGGTCCAGATTTTATAAT
ATCTGGACATGGAGAAGAAGGAAGATTCATGCTCGCCGGTTGGGGTTCTT
GAGGACTATTTTCGAAGCGAAGACTCCGAAACATGTTCTTCAAAAGAACC
ATGCTCTGAAACTAAGCCGGAATCCAAATCCAATTCTCGCTGGCATTTAT
TCTACGACTTATTCAGAAACAAATCGAAGAAATCATTAGTCACATTGTAT
CCCCTCAAGCTTTCAATAAGAAGAAGCAGTAGTATGAGAGAGGGCATTGA
TATGCCGAGGAATCTTTTTGTAAATTCCTACGATTCACAGTCTCCCCAGA
AGATTTTCTCCCTCTATGAGCTGCAATCCGCCACCAACAATTTCAGCTTC
GAAAATTTGATTGGAAAGGGAGGTTATGCTGAAGTTTACAAAGGGCGTTT
GAGAAATGGGCAGCTTGTGGCAATCAAACGGCTAACAAGAGGTACAGCAG
ATGAGATTATAGCGGACTTTTTATCGGAGCTTGGGATTATGGCTCATGTC
GATCATCCTAATACTGCTAAGTTATTAGGATATGGGATTGAAGGAGGCAT
GCACATTGTTCTTGAATTGTCTCCTAATGGAAGCTTAGCTTCTCTCCTTT
ATGGTATGAAGGAGAAACTGAAATGGGGTATCAGGTATAAGATTGCGTTA
GGGGTAGCCGAAGGCTTACTTTATCTTCATGAGGGCTGTCAGAGGAGAAT
CATTCATAGAGATATTAAAGCTGCCCATATTTTGCTCACTGAGGACT
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