FC929045

Overview
NameFC929045
Unique NameFC929045
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length847
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: SRF5_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsis thaliana GN=SRF5 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.776e-19
Identity = 61/190 (32.11%), Postives = 103/190 (54.21%), Query Frame = 1
Query:  292 TLYPLKLSIRRSSSMREGIDMPRNLFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGI-MAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLY---GMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            T +  KL+ +R++S R  ++                  F L +LQSAT NFS  NL+G+G    VY+ +  +G+ +A+K++     D   ++ ++ + + ++ + H N A+L+GY  E G + +V E   NGSL   L+      + L W  R +IALG A  + YLHE C   ++H++IK+++ILL  D
Sbjct:  372 TEFANKLNAKRTTSTRSAVE------------------FELSDLQSATANFSPGNLLGEGSIGRVYRAKYSDGRTLAVKKIDSTLFDSGKSEGITPIVMSLSKIRHQNIAELVGYCSEQGHNMLVYEYFRNGSLHEFLHLSDCFSKPLTWNTRVRIALGTARAVEYLHEACSPSVMHKNIKSSNILLDAD 543          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: LRKA1_ARATH (Lectin-domain containing receptor kinase A4.1 OS=Arabidopsis thaliana GN=LECRKA4.1 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.776e-19
Identity = 50/145 (34.48%), Postives = 87/145 (60.00%), Query Frame = 1
Query:  418 ELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGY-GIEGGMHIVLELSPNGSLASLLYGMKEK----LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILL 837
            +L  AT+ F    +IG GG+  V+KG+L N   +A+K++   +   +  +F++E+  +  + H N   L G+   +  + ++ +  PNGSL SLLY +  +    L W  R++IA G+A GLLYLHE  ++ +IHRD+K +++L+
Sbjct:  359 DLYVATDGFKKTGIIGTGGFGTVFKGKLPNSDPIAVKKIIPSSRQGV-REFVAEIESLGKLRHKNLVNLQGWCKHKNDLLLIYDYIPNGSLDSLLYTVPRRSGAVLSWNARFQIAKGIASGLLYLHEEWEKIVIHRDVKPSNVLI 502          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: CRK43_ARATH (Putative cysteine-rich receptor-like protein kinase 43 OS=Arabidopsis thaliana GN=CRK43 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.776e-19
Identity = 65/150 (43.33%), Postives = 86/150 (57.33%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRL---TRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEG-GMHIVLELSPNGSLASLLYG--MKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILL 837
            F    L+ ATNNF+    +G GGY EV+KG L +G+ +AIKRL    +   DEI     +E+ +++   H N  +LLG         IV E   N SL  +L+    K++L W  R  I LG AEGL YLHE C  +IIHRDIKA++ILL
Sbjct:  319 FEYSTLKKATNNFNESCKLGVGGYGEVFKGTLSDGREIAIKRLHVSGKKPRDEI----HNEIDVISRCQHKNLVRLLGCCFTNMNSFIVYEFLANTSLDHILFNPEKKKELDWKKRRTIILGTAEGLEYLHETC--KIIHRDIKASNILL 462          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: WAKLS_ARATH (Putative wall-associated receptor kinase-like 16 OS=Arabidopsis thaliana GN=WAKL16 PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.319e-19
Identity = 57/152 (37.50%), Postives = 88/152 (57.89%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMK--EKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            KIF+  +++ ATN +    ++G+GG   VYKG L +  +VAIK+   G  +++   F++E+ +++ ++H N  KLLG  +E  + + V E    GSL   L+G      L W  R +IA+ VA  + YLH G    IIHRDIK  +ILL E+
Sbjct:   94 KIFTEEDMKEATNGYDVSRILGQGGQWTVYKGILPDNSIVAIKKTRLGDNNQV-EQFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFITGGSLFDHLHGSMFVSSLTWEHRLEIAIEVAGAIAYLHSGASIPIIHRDIKTENILLDEN 244          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: SRF2_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 2 OS=Arabidopsis thaliana GN=SRF2 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.319e-19
Identity = 60/152 (39.47%), Postives = 84/152 (55.26%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTAD-EIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKEK-LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            K+FS  ELQ ATN FS ENL+G+G    VY+ +L +GQ   ++ +   +        F   L   + + HPN   LLG+ IE G H+ V E   + SL + ++    K L WG+R +IA+GVA  L YLH      I H D+KA +ILL E+
Sbjct:  401 KLFSAAELQLATNCFSEENLLGEGPLGSVYRAKLPDGQFAVVRNIPMSSLSLHEEEQFTEVLQTASKLRHPNIVTLLGFCIENGEHLLVYEYVGHLSLYNAMHDEVYKPLSWGLRLRIAIGVARALDYLHSSFCPPIAHSDLKATNILLDEE 552          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: SRF1_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsis thaliana GN=SRF1 PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 2.319e-19
Identity = 63/187 (33.69%), Postives = 101/187 (54.01%), Query Frame = 1
Query:  301 PLKLSIRRSSSMREGIDMPRNLFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTAD-EIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHIVL-ELSPNGSLASLLY---GMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            P + S++R++S              S+   +  K F++  LQ  TN+FS ENLIG G    VY+  L  G+L A+++L + + + E    FL  +  +  + H N  +L+G+  E    +++ E   NG+L  LL+    +K +L W +R +IAL  A+ L YLHE C    IHR+ K+A+ILL +D
Sbjct:  444 PAEASLKRTTS-------------KSHGPLTAVKHFTVASLQQHTNSFSHENLIGTGMLGSVYRAELPGGKLFAVRKLDKKSPNHEEEGKFLELVNNIDRIRHANIVQLVGFCSEHSQRLLIHEYCRNGTLHDLLHIDDRLKIELSWNVRVRIALEAAKALEYLHEICDPPSIHRNFKSANILLDDD 617          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: RLK6_ARATH (Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana GN=At3g21340 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.319e-19
Identity = 55/149 (36.91%), Postives = 85/149 (57.05%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEG-GMHIVLELSPNGSLASLLYGMK--EKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTE 843
            F+  E+ + TNNF  E ++GKGG+  VY G + N + VA+K L+  ++     +F +E+ ++  V H N   L+GY  EG  + ++ E   NG L   + G +    L W  R KI +  A+GL YLH GC+  ++HRD+K  +ILL E
Sbjct:  582 FTYSEVVTMTNNF--ERVLGKGGFGMVYHGTVNNTEQVAVKMLSHSSSQGY-KEFKAEVELLLRVHHKNLVGLVGYCDEGENLALIYEYMANGDLREHMSGKRGGSILNWETRLKIVVESAQGLEYLHNGCKPPMVHRDVKTTNILLNE 727          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: LRKA3_ARATH (Lectin-domain containing receptor kinase A4.3 OS=Arabidopsis thaliana GN=LECRKA4.3 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.319e-19
Identity = 53/171 (30.99%), Postives = 94/171 (54.97%), Query Frame = 1
Query:  352 MPRNLFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQ-LVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGY-GIEGGMHIVLELSPNGSLASLLYGMKEK----LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            M +   +  ++   P + F   +L  AT  F    ++G GG+  VY+G +R+    +A+K++T  +   +  +F++E+  +  + H N   L G+      + ++ +  PNGSL SLLY    +    L W  R++IA G+A GLLYLHE  ++ +IHRD+K +++L+  D
Sbjct:  334 MQQEEILEDWEIDHPHR-FRYRDLYKATEGFKENRVVGTGGFGIVYRGNIRSSSDQIAVKKITPNSMQGV-REFVAEIESLGRLRHKNLVNLQGWCKHRNDLLLIYDYIPNGSLDSLLYSKPRRSGAVLSWNARFQIAKGIASGLLYLHEEWEQIVIHRDVKPSNVLIDSD 502          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: WAKLM_ARATH (Wall-associated receptor kinase-like 17 OS=Arabidopsis thaliana GN=WAKL17 PE=2 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 3.029e-19
Identity = 56/152 (36.84%), Postives = 92/152 (60.53%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKE---KLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTE 843
            +IF+  EL+ AT NFS   ++G GG   VYKG L +G+ VA+K+ ++   ++ + +F++E+ I++ ++H +  KLLG  +E  + I V E   NG+L   ++  +     + WG+R +IA+ +A  L YLH      I HRDIK+ +ILL E
Sbjct:  430 RIFTSKELEKATENFSENRVLGHGGQGTVYKGMLVDGRTVAVKK-SKVIDEDKLQEFINEVVILSQINHRHVVKLLGCCLETEVPILVYEFIINGNLFKHIHEEEADDYTMIWGMRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNILLDE 580          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: WAKLN_ARATH (Wall-associated receptor kinase-like 18 OS=Arabidopsis thaliana GN=WAKL18 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.956e-19
Identity = 54/152 (35.53%), Postives = 92/152 (60.53%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGM-HIVLELSPNGSLASLLYGMKE---KLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTE 843
            ++F+  EL+ AT NFS   ++G GG   VYKG L +G+ VA+K+ ++   ++ + +F++E+ I++ ++H +  KLLG  +E  +  +V E   NG+L   ++  +     + WG+R +IA+ +A  L YLH      I HRDIK+ +ILL E
Sbjct:  439 RVFNSRELEKATENFSENRVLGHGGQGTVYKGMLVDGRTVAVKK-SKVIDEDKLQEFINEVVILSQINHRHVVKLLGCCLETEVPMLVYEFIINGNLFKHIHEEESDDYTMLWGMRLRIAVDIAGALSYLHSSASSPIYHRDIKSTNILLDE 589          
The following BLAST results are available for this feature:
BLAST of FC929045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 294
Match NameE-valueIdentityDescription
SRF5_ARATH1.776e-1932.11Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsi... [more]
LRKA1_ARATH1.776e-1934.48Lectin-domain containing receptor kinase A4.1 OS=A... [more]
CRK43_ARATH1.776e-1943.33Putative cysteine-rich receptor-like protein kinas... [more]
WAKLS_ARATH2.319e-1937.50Putative wall-associated receptor kinase-like 16 O... [more]
SRF2_ARATH2.319e-1939.47Protein STRUBBELIG-RECEPTOR FAMILY 2 OS=Arabidopsi... [more]
SRF1_ARATH2.319e-1933.69Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsi... [more]
RLK6_ARATH2.319e-1936.91Receptor-like protein kinase At3g21340 OS=Arabidop... [more]
LRKA3_ARATH2.319e-1930.99Lectin-domain containing receptor kinase A4.3 OS=A... [more]
WAKLM_ARATH3.029e-1936.84Wall-associated receptor kinase-like 17 OS=Arabido... [more]
WAKLN_ARATH3.956e-1935.53Wall-associated receptor kinase-like 18 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1DD03RM2 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH1DD03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929045 ID=FC929045; Name=FC929045; organism=Citrus clementina; type=EST; length=847bp
ATTTTAGTTTCTTTTTTGACTGAGATAAGAGGACGGGACAAAGAAACAGA
ATTTAGAATGCTCTGTTCTCATCCCCTGTTTCTGGTCCAGATTTTATAAT
ATCTGGACATGGAGAAGAAGGAAGATTCATGCTCGCCGGTTGGGGTTCTT
GAGGACTATTTTCGAAGCGAAGACTCCGAAACATGTTCTTCAAAAGAACC
ATGCTCTGAAACTAAGCCGGAATCCAAATCCAATTCTCGCTGGCATTTAT
TCTACGACTTATTCAGAAACAAATCGAAGAAATCATTAGTCACATTGTAT
CCCCTCAAGCTTTCAATAAGAAGAAGCAGTAGTATGAGAGAGGGCATTGA
TATGCCGAGGAATCTTTTTGTAAATTCCTACGATTCACAGTCTCCCCAGA
AGATTTTCTCCCTCTATGAGCTGCAATCCGCCACCAACAATTTCAGCTTC
GAAAATTTGATTGGAAAGGGAGGTTATGCTGAAGTTTACAAAGGGCGTTT
GAGAAATGGGCAGCTTGTGGCAATCAAACGGCTAACAAGAGGTACAGCAG
ATGAGATTATAGCGGACTTTTTATCGGAGCTTGGGATTATGGCTCATGTC
GATCATCCTAATACTGCTAAGTTATTAGGATATGGGATTGAAGGAGGCAT
GCACATTGTTCTTGAATTGTCTCCTAATGGAAGCTTAGCTTCTCTCCTTT
ATGGTATGAAGGAGAAACTGAAATGGGGTATCAGGTATAAGATTGCGTTA
GGGGTAGCCGAAGGCTTACTTTATCTTCATGAGGGCTGTCAGAGGAGAAT
CATTCATAGAGATATTAAAGCTGCCCATATTTTGCTCACTGAGGACT
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