FC929045

Overview
NameFC929045
Unique NameFC929045
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length847
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: HSL2_ARATH (LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana GN=HSL2 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.347e-16
Identity = 53/140 (37.86%), Postives = 78/140 (55.71%), Query Frame = 1
Query:  451 ENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIAD--FLSELGIMAHVDHPNTAKLLGY-GIEGGMHIVLELSPNGSLASLLYGMKEK-----LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            +N+IG GG   VY+ +L++GQ +A+K+L   T  +  ++  F SE+  +  V H N  KLL     E    +V E   NGSL  +L+  KE      L W  R+ IA+G A+GL YLH      I+HRD+K+ +ILL  +
Sbjct:  689 DNIIGSGGSGLVYRVKLKSGQTLAVKKLWGETGQKTESESVFRSEVETLGRVRHGNIVKLLMCCNGEEFRFLVYEFMENGSLGDVLHSEKEHRAVSPLDWTTRFSIAVGAAQGLSYLHHDSVPPIVHRDVKSNNILLDHE 828          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: Y2165_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g16250 OS=Arabidopsis thaliana GN=At2g16250 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.121e-16
Identity = 55/165 (33.33%), Postives = 82/165 (49.70%), Query Frame = 1
Query:  376 SYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH--IVLELSPNGSLASLLYGMKEK-------LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTE 843
            ++D       FS  +L  AT  F+  NLI +G    +++G L NG  V IK++     +     ++SEL + +   H      LG+ +E      +V +   +G LAS L+   E        L W  R KIALG AEGL YLH  C   ++HRD++A+ ILL +
Sbjct:  505 TFDLSRLGNAFSYEQLLQATEEFNDANLIKRGHSGNLFRGFLENGIPVVIKKID--VREGKSEGYISELELFSKAGHQRLVPFLGHCLENESQKFLVYKFMRHGDLASSLFRKSENEGDGLKSLDWITRLKIALGAAEGLSYLHHECSPPLVHRDVQASSILLDD 667          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: FER_RAT (Proto-oncogene tyrosine-protein kinase Fer (Fragment) OS=Rattus norvegicus GN=Fer PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.121e-16
Identity = 52/135 (38.52%), Postives = 75/135 (55.56%), Query Frame = 1
Query:  445 SFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIE-GGMHIVLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            S   L+GKG + EVYKG L++   VA+K        E+   FL E  I+   DHPN  KL+G   +   ++I++EL P G   S L   K++LK     + +L VA G+LYL EG  +  IHRD+ A + L+ E+
Sbjct:   65 SLGELLGKGNFGEVYKGTLKDKTPVAVKTCKEDLPQELKIKFLQEAKILKQYDHPNIVKLIGVCTQRQPVYIIMELVPGGDFLSFLRKRKDELKLKQLVRFSLDVAAGMLYL-EG--KNCIHRDLAARNCLVGEN 196          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: FEI2_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 2 OS=Arabidopsis thaliana GN=FEI2 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.121e-16
Identity = 50/130 (38.46%), Postives = 72/130 (55.38%), Query Frame = 1
Query:  451 ENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHIVL-ELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILL 837
            E++IG GG+  VYK  + +G + A+KR+ +   +     F  EL I+  + H     L GY       ++L +  P GSL   L+   E+L W  R  I +G A+GL YLH  C  RIIHRDIK+++ILL
Sbjct:  307 EHIIGCGGFGTVYKLSMDDGNVFALKRIVK-LNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLLYDYLPGGSLDEALHKRGEQLDWDSRVNIIIGAAKGLAYLHHDCSPRIIHRDIKSSNILL 435          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: FEI1_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.191e-15
Identity = 50/130 (38.46%), Postives = 73/130 (56.15%), Query Frame = 1
Query:  451 ENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHIVL-ELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILL 837
            E++IG GG+  VYK  + +G++ A+KR+ +   +     F  EL I+  + H     L GY       ++L +  P GSL   L+   E+L W  R  I +G A+GL YLH  C  RIIHRDIK+++ILL
Sbjct:  309 EHIIGCGGFGTVYKLAMDDGKVFALKRILK-LNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLLYDYLPGGSLDEALHERGEQLDWDSRVNIIIGAAKGLSYLHHDCSPRIIHRDIKSSNILL 437          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: FER_MOUSE (Proto-oncogene tyrosine-protein kinase Fer OS=Mus musculus GN=Fer PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.556e-15
Identity = 50/135 (37.04%), Postives = 73/135 (54.07%), Query Frame = 1
Query:  445 SFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIE-GGMHIVLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            S   L+GKG + EVYKG L++   VAIK        E+   FL E  I+   DHPN  KL+G   +   ++I++EL P G   + L   K++LK     + +L VA G+LYL     +  IHRD+ A + L+ E+
Sbjct:  565 SLGELLGKGNFGEVYKGTLKDKTPVAIKTCKEDLPQELKIKFLQEAKILKQYDHPNIVKLIGVCTQRQPVYIIMELVPGGDFLTFLRKRKDELKLKQLVRFSLDVAAGMLYLE---SKNCIHRDLAARNCLVGEN 696          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: DRKB_DICDI (Probable serine/threonine-protein kinase drkB OS=Dictyostelium discoideum GN=drkB PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.032e-15
Identity = 49/131 (37.40%), Postives = 78/131 (59.54%), Query Frame = 1
Query:  460 IGKGGYAEVYKGRLRNGQLVAIKRLTRGTADE-IIADFLSELGIMAHVDHPNTAKLLGYG-IEGGMHIVLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            IGKG + EVY G  R  Q VA+K+L     +E I+ +F  E+ +M ++ HPN  + LG   I   + I  E  P GSL S+L+  K K+ W +  ++ +  A+G++YLH G    I+HRD+K+ ++L+ E+
Sbjct:  397 IGKGNFGEVYLGTWRGSQ-VAVKKLPAHNINENILKEFHREINLMKNLRHPNVIQFLGSCLISPDICICTEYMPRGSLYSILHNEKIKISWSLVKRMMIDAAKGIIYLH-GSTPVILHRDLKSHNLLVDEN 525          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: Y3804_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 OS=Arabidopsis thaliana GN=At3g28040 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.654e-15
Identity = 50/133 (37.59%), Postives = 74/133 (55.64%), Query Frame = 1
Query:  460 IGKGGYAEVYKGRL-RNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHIVL-ELSPNGSLASLLYGMKEK---LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTE 843
            IG+G +  VYK  L   G+ +A+K+L      + + DF  E+ I+A   HPN   + GY     +H+++ E  PNG+L S L+  +     L W +RYKI LG A+GL YLH   +   IH ++K  +ILL E
Sbjct:  732 IGEGVFGTVYKAPLGEQGRNLAVKKLVPSPILQNLEDFDREVRILAKAKHPNLVSIKGYFWTPDLHLLVSEYIPNGNLQSKLHEREPSTPPLSWDVRYKIILGTAKGLAYLHHTFRPTTIHFNLKPTNILLDE 864          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: Y1756_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07560 OS=Arabidopsis thaliana GN=At1g07560 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.654e-15
Identity = 57/181 (31.49%), Postives = 95/181 (52.49%), Query Frame = 1
Query:  304 LKLSIRRSSSMREGIDMPRNLFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGG-MHIVLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTE 843
            L + I+R SS R+G    +         ++ +K ++  E+ + T  F  E ++GKGG+  VY G +   + VA+K L+  +A     +F +E+ ++  V H N   L+GY  E   + ++ +   NG L     G    + W  R  IA+  A GL YLH GC+  I+HRD+K+++ILL +
Sbjct:  532 LFVCIKRRSSSRKGPSPSQQSI------ETIKKRYTYAEVLAMTKKF--ERVLGKGGFGMVYHGYINGTEEVAVKLLSPSSAQGY-KEFKTEVELLLRVYHTNLVSLVGYCDEKDHLALIYQYMVNGDLKKHFSG-SSIISWVDRLNIAVDAASGLEYLHIGCKPLIVHRDVKSSNILLDD 702          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: Y1571_ARATH (Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Arabidopsis thaliana GN=At1g35710 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.466e-15
Identity = 54/156 (34.62%), Postives = 82/156 (52.56%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIA------DFLSELGIMAHVDHPNTAKLLGY-GIEGGMHIVLELSPNGSLASLLYGMKE--KLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            F   ++  +TN F   +LIG GGY++VY+  L++  ++A+KRL   T DE I+      +FL+E+  +  + H N  KL G+        ++ E    GSL  LL   +E  +L W  R  +  GVA  L Y+H      I+HRDI + +ILL  D
Sbjct:  839 FKYQDIIESTNEFDPTHLIGTGGYSKVYRANLQD-TIIAVKRL-HDTIDEEISKPVVKQEFLNEVKALTEIRHRNVVKLFGFCSHRRHTFLIYEYMEKGSLNKLLANDEEAKRLTWTKRINVVKGVAHALSYMHHDRITPIVHRDISSGNILLDND 992          
The following BLAST results are available for this feature:
BLAST of FC929045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 294
Match NameE-valueIdentityDescription
HSL2_ARATH5.347e-1637.86LRR receptor-like serine/threonine-protein kinase ... [more]
Y2165_ARATH9.121e-1633.33Probable LRR receptor-like serine/threonine-protei... [more]
FER_RAT9.121e-1638.52Proto-oncogene tyrosine-protein kinase Fer (Fragme... [more]
FEI2_ARATH9.121e-1638.46LRR receptor-like serine/threonine-protein kinase ... [more]
FEI1_ARATH1.191e-1538.46LRR receptor-like serine/threonine-protein kinase ... [more]
FER_MOUSE1.556e-1537.04Proto-oncogene tyrosine-protein kinase Fer OS=Mus ... [more]
DRKB_DICDI2.032e-1537.40Probable serine/threonine-protein kinase drkB OS=D... [more]
Y3804_ARATH2.654e-1537.59Probably inactive leucine-rich repeat receptor-lik... [more]
Y1756_ARATH2.654e-1531.49Probable LRR receptor-like serine/threonine-protei... [more]
Y1571_ARATH3.466e-1534.62Probable leucine-rich repeat receptor-like protein... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1DD03RM2 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH1DD03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929045 ID=FC929045; Name=FC929045; organism=Citrus clementina; type=EST; length=847bp
ATTTTAGTTTCTTTTTTGACTGAGATAAGAGGACGGGACAAAGAAACAGA
ATTTAGAATGCTCTGTTCTCATCCCCTGTTTCTGGTCCAGATTTTATAAT
ATCTGGACATGGAGAAGAAGGAAGATTCATGCTCGCCGGTTGGGGTTCTT
GAGGACTATTTTCGAAGCGAAGACTCCGAAACATGTTCTTCAAAAGAACC
ATGCTCTGAAACTAAGCCGGAATCCAAATCCAATTCTCGCTGGCATTTAT
TCTACGACTTATTCAGAAACAAATCGAAGAAATCATTAGTCACATTGTAT
CCCCTCAAGCTTTCAATAAGAAGAAGCAGTAGTATGAGAGAGGGCATTGA
TATGCCGAGGAATCTTTTTGTAAATTCCTACGATTCACAGTCTCCCCAGA
AGATTTTCTCCCTCTATGAGCTGCAATCCGCCACCAACAATTTCAGCTTC
GAAAATTTGATTGGAAAGGGAGGTTATGCTGAAGTTTACAAAGGGCGTTT
GAGAAATGGGCAGCTTGTGGCAATCAAACGGCTAACAAGAGGTACAGCAG
ATGAGATTATAGCGGACTTTTTATCGGAGCTTGGGATTATGGCTCATGTC
GATCATCCTAATACTGCTAAGTTATTAGGATATGGGATTGAAGGAGGCAT
GCACATTGTTCTTGAATTGTCTCCTAATGGAAGCTTAGCTTCTCTCCTTT
ATGGTATGAAGGAGAAACTGAAATGGGGTATCAGGTATAAGATTGCGTTA
GGGGTAGCCGAAGGCTTACTTTATCTTCATGAGGGCTGTCAGAGGAGAAT
CATTCATAGAGATATTAAAGCTGCCCATATTTTGCTCACTGAGGACT
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