FC929045

Overview
NameFC929045
Unique NameFC929045
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length847
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: HSL1_ARATH (Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.720e-14
Identity = 59/163 (36.20%), Postives = 81/163 (49.69%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEI------------IAD--FLSELGIMAHVDHPNTAKL-LGYGIEGGMHIVLELSPNGSLASLLYGMKE-KLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            FS +E+  + +    +N+IG G   +VYK  L NG+ VA+KRL  G+  E             + D  F +E+  +  + H N  KL           +V E  PNGSL  LL+  K   L W  R+KI L  AEGL YLH      I+HRDIK+ +IL+  D
Sbjct:  667 FSEHEILESLDE---DNVIGAGASGKVYKVVLTNGETVAVKRLWTGSVKETGDCDPEKGYKPGVQDEAFEAEVETLGKIRHKNIVKLWCCCSTRDCKLLVYEYMPNGSLGDLLHSSKGGMLGWQTRFKIILDAAEGLSYLHHDSVPPIVHRDIKSNNILIDGD 826          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: SHKC_DICDI (Dual specificity protein kinase shkC OS=Dictyostelium discoideum GN=shkC PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.246e-14
Identity = 51/136 (37.50%), Postives = 80/136 (58.82%), Query Frame = 1
Query:  445 SFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEI-IADFLSELGIMAHVDHPNTAKLLGY-GIEGGMHIVLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            +FE LIG G + +VYKGR R  + VA+K L +   D   ++ F  E+ +M+ + HPN    +G   I G   IV EL P G+L +LL+  K +L   +R ++A   A G+ +LHE      +HRDIK++++L+ E+
Sbjct:   25 NFEELIGTGSFGKVYKGRCRQ-KAVAVKLLHKQNFDAATLSAFRKEVHLMSKIYHPNICLFMGACTIPGRCVIVTELVPKGNLETLLHDQKIQLPLYLRMRMARDAALGINWLHES-NPVFVHRDIKSSNLLVDEN 158          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: RPK1_IPONI (Receptor-like protein kinase OS=Ipomoea nil GN=INRPK1 PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.934e-14
Identity = 49/148 (33.11%), Postives = 74/148 (50.00%), Query Frame = 1
Query:  412 LYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHIVL-ELSPNGSLASLLYGMK--EKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            L ++  AT N + + +IGKG +  +YK  L   ++ A+K+L            + E+  +  V H N  KL  + +     ++L     NGSL  +L+     + L W  R+ IA+G A GL YLH  C   I+HRDIK  +ILL  D
Sbjct:  806 LNKVLEATENLNDKYVIGKGAHGTIYKATLSPDKVYAVKKLVFTGIKNGSVSMVREIETIGKVRHRNLIKLEEFWLRKEYGLILYTYMENGSLHDILHETNPPKPLDWSTRHNIAVGTAHGLAYLHFDCDPAIVHRDIKPMNILLDSD 953          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: FER_HUMAN (Proto-oncogene tyrosine-protein kinase Fer OS=Homo sapiens GN=FER PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.934e-14
Identity = 47/131 (35.88%), Postives = 70/131 (53.44%), Query Frame = 1
Query:  457 LIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIE-GGMHIVLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            L+GKG + EVYKG L++   VA+K        E+   FL E  I+   DHPN  KL+G   +   ++I++EL   G   + L   K++LK     K +L  A G+LYL     +  IHRD+ A + L+ E+
Sbjct:  568 LLGKGNFGEVYKGTLKDKTSVAVKTCKEDLPQELKIKFLQEAKILKQYDHPNIVKLIGVCTQRQPVYIIMELVSGGDFLTFLRRKKDELKLKQLVKFSLDAAAGMLYLE---SKNCIHRDLAARNCLVGEN 695          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: Y1719_ARATH (Probable inactive receptor kinase At1g27190 OS=Arabidopsis thaliana GN=At1g27190 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.832e-14
Identity = 56/157 (35.67%), Postives = 78/157 (49.68%), Query Frame = 1
Query:  388 QSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGI-EGGMHIVLELSPNGSLASLLYG---MKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            Q P     L +L +ATNNFS  N+         YK  L +G  +A+KRL+     E    F SE+  +  + HPN   LLGY + E    +V +   NG+L S L+        L W  R  I +G A+GL +LH GCQ   +H+ I +  ILL +D
Sbjct:  283 QKPIVKIKLGDLMAATNNFSSGNIDVSSRTGVSYKADLPDGSALAVKRLSACGFGE--KQFRSEMNKLGELRHPNLVPLLGYCVVEDERLLVYKHMVNGTLFSQLHNGGLCDAVLDWPTRRAIGVGAAKGLAWLHHGCQPPYLHQFISSNVILLDDD 437          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: ROCO4_DICDI (Probable serine/threonine-protein kinase roco4 OS=Dictyostelium discoideum GN=roco4 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.005e-14
Identity = 48/143 (33.57%), Postives = 79/143 (55.24%), Query Frame = 1
Query:  430 ATNNFSFENLIGKGGYAEVYKGRL-RNGQLVAIKRLTRGTAD------EIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHIVLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILL 837
            A N   +E  IGKGG+  V+KGRL ++  +VAIK L  G ++      E   +F  E+ IM++++HPN  KL G  +     +V+E  P G L   L      +KW ++ ++ L +A G+ Y+ +     I+HRD+++ +I L
Sbjct: 1022 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGL-MHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFL 1162          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: IRAK1_HUMAN (Interleukin-1 receptor-associated kinase 1 OS=Homo sapiens GN=IRAK1 PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 6.536e-14
Identity = 54/151 (35.76%), Postives = 79/151 (52.32%), Query Frame = 1
Query:  412 LYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIA---DFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLYGMKE---KLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTE 843
            L E+   T+NFS E  IG+GG+  VY+  +RN  + A+KRL      E  A    FL+E+  ++   HPN     GY  + G + +V    PNGSL   L+   +    L W  R  I LG A  + +LH+     +IH DIK++++LL E
Sbjct:  202 LCEISRGTHNFSEELKIGEGGFGCVYRAVMRN-TVYAVKRLKENADLEWTAVKQSFLTEVEQLSRFRHPNIVDFAGYCAQNGFYCLVYGFLPNGSLEDRLHCQTQACPPLSWPQRLDILLGTARAIQFLHQD-SPSLIHGDIKSSNVLLDE 350          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: KPEL_DROME (Serine/threonine-protein kinase pelle OS=Drosophila melanogaster GN=pll PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.537e-14
Identity = 49/152 (32.24%), Postives = 82/152 (53.95%), Query Frame = 1
Query:  418 ELQSATNNFSFENLIGKGGYAEVYKGRLRNGQL-VAIKRLTRGTADEIIADF---LSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLYGMKEK-----LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTE 843
            EL++AT+ +S +N +G+GG+ +VY+G+ +   + + +        D+ + +     +EL  +  + H N   L GY I+GG   +V +L   GSL + L   K +     L W  R+ I+LG A G+ +LH      +IH DIK A+ILL +
Sbjct:  205 ELENATDGWSPDNRLGQGGFGDVYRGKWKQLDVAIKVMNYRSPNIDQKMVELQQSYNELKYLNSIRHDNILALYGYSIKGGKPCLVYQLMKGGSLEARLRAHKAQNPLPALTWQQRFSISLGTARGIYFLHTARGTPLIHGDIKPANILLDQ 356          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: Y1699_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g69990 OS=Arabidopsis thaliana GN=At1g69990 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.456e-13
Identity = 51/154 (33.12%), Postives = 77/154 (50.00%), Query Frame = 1
Query:  388 QSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGI-EGGMHIVLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            Q P     L +L  ATN F   N++        YK  L +G  + +KRL+    +     F SE+  +  + HPN   LLG+ + E  + +V +   NG+L S L   +  + W  R ++A+G A GL +LH GCQ   +H+ I +  ILL ED
Sbjct:  277 QKPIVKIKLVDLIEATNGFDSGNIVVSSRSGVSYKADLPDGSTLEVKRLS-SCCELSEKQFRSEINKLGQIRHPNLVPLLGFCVVEDEILLVYKHMANGTLYSQL--QQWDIDWPTRVRVAVGAARGLAWLHHGCQPLYMHQYISSNVILLDED 427          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: PUB51_ARATH (U-box domain-containing protein 51 OS=Arabidopsis thaliana GN=PUB51 PE=2 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.456e-13
Identity = 56/152 (36.84%), Postives = 77/152 (50.66%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHIVLELSPNGSLASLLYGMKEK--------LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILL 837
            F   E+  AT++FS E  IG GGY  VY+  L +   VA+K L       +   F  EL I++ + HP+   LLG   E G  +V E   NGSL   L   +          L+W  R++IA  +A  L +LH    R I+HRD+K A+ILL
Sbjct:  417 FEWEEIVEATSSFSDELKIGVGGYGSVYRCNLHH-TTVAVKVL-HSDKSSLTKQFHQELEILSKIRHPHLLLLLGACPERGS-LVYEYMHNGSLEERLMKRRPNVDTPQPPPLRWFERFRIAWEIASALYFLHTNEPRPIVHRDLKPANILL 565          
The following BLAST results are available for this feature:
BLAST of FC929045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 294
Match NameE-valueIdentityDescription
HSL1_ARATH1.720e-1436.20Receptor-like protein kinase HSL1 OS=Arabidopsis t... [more]
SHKC_DICDI2.246e-1437.50Dual specificity protein kinase shkC OS=Dictyostel... [more]
RPK1_IPONI2.934e-1433.11Receptor-like protein kinase OS=Ipomoea nil GN=INR... [more]
FER_HUMAN2.934e-1435.88Proto-oncogene tyrosine-protein kinase Fer OS=Homo... [more]
Y1719_ARATH3.832e-1435.67Probable inactive receptor kinase At1g27190 OS=Ara... [more]
ROCO4_DICDI5.005e-1433.57Probable serine/threonine-protein kinase roco4 OS=... [more]
IRAK1_HUMAN6.536e-1435.76Interleukin-1 receptor-associated kinase 1 OS=Homo... [more]
KPEL_DROME8.537e-1432.24Serine/threonine-protein kinase pelle OS=Drosophil... [more]
Y1699_ARATH1.456e-1333.12Probable LRR receptor-like serine/threonine-protei... [more]
PUB51_ARATH1.456e-1336.84U-box domain-containing protein 51 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1DD03RM2 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH1DD03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929045 ID=FC929045; Name=FC929045; organism=Citrus clementina; type=EST; length=847bp
ATTTTAGTTTCTTTTTTGACTGAGATAAGAGGACGGGACAAAGAAACAGA
ATTTAGAATGCTCTGTTCTCATCCCCTGTTTCTGGTCCAGATTTTATAAT
ATCTGGACATGGAGAAGAAGGAAGATTCATGCTCGCCGGTTGGGGTTCTT
GAGGACTATTTTCGAAGCGAAGACTCCGAAACATGTTCTTCAAAAGAACC
ATGCTCTGAAACTAAGCCGGAATCCAAATCCAATTCTCGCTGGCATTTAT
TCTACGACTTATTCAGAAACAAATCGAAGAAATCATTAGTCACATTGTAT
CCCCTCAAGCTTTCAATAAGAAGAAGCAGTAGTATGAGAGAGGGCATTGA
TATGCCGAGGAATCTTTTTGTAAATTCCTACGATTCACAGTCTCCCCAGA
AGATTTTCTCCCTCTATGAGCTGCAATCCGCCACCAACAATTTCAGCTTC
GAAAATTTGATTGGAAAGGGAGGTTATGCTGAAGTTTACAAAGGGCGTTT
GAGAAATGGGCAGCTTGTGGCAATCAAACGGCTAACAAGAGGTACAGCAG
ATGAGATTATAGCGGACTTTTTATCGGAGCTTGGGATTATGGCTCATGTC
GATCATCCTAATACTGCTAAGTTATTAGGATATGGGATTGAAGGAGGCAT
GCACATTGTTCTTGAATTGTCTCCTAATGGAAGCTTAGCTTCTCTCCTTT
ATGGTATGAAGGAGAAACTGAAATGGGGTATCAGGTATAAGATTGCGTTA
GGGGTAGCCGAAGGCTTACTTTATCTTCATGAGGGCTGTCAGAGGAGAAT
CATTCATAGAGATATTAAAGCTGCCCATATTTTGCTCACTGAGGACT
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