FC929045

Overview
NameFC929045
Unique NameFC929045
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length847
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: THE1_ARATH (Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.517e-22
Identity = 60/151 (39.74%), Postives = 87/151 (57.62%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGG-MHIVLELSPNGSLASLLYGMK-EKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            + F   E+  ATN F   +L+G GG+  VYKG L +G  VA+KR     +++ +A+F +E+ +++ + H +   L+GY  E   M +V E   NG L S LYG     L W  R +I +G A GL YLH G  + IIHRD+K  +ILL E+
Sbjct:  496 RCFMFQEIMDATNKFDESSLLGVGGFGRVYKGTLEDGTKVAVKR-GNPRSEQGMAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGADLPPLSWKQRLEICIGAARGLHYLHTGASQSIIHRDVKTTNILLDEN 645          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 8.517e-22
Identity = 61/162 (37.65%), Postives = 96/162 (59.26%), Query Frame = 1
Query:  388 QSPQ-KIFSLYELQSATNNFSFENLIGKGGYAEVYKG----------RLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGG-MHIVLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILL 837
            +SP  K+++  +L++AT NF  ++++G+GG+ +VY+G          R+ +G +VAIKRL   +     A++ SE+  +  + H N  KLLGY  E   + +V E  P GSL S L+   +   W +R KI +G A GL +LH   QR +I+RD KA++ILL
Sbjct:   67 ESPNLKVYNFLDLKTATKNFKPDSMLGQGGFGKVYRGWVDATTLAPSRVGSGMIVAIKRLNSESVQGF-AEWRSEVNFLGMLSHRNLVKLLGYCREDKELLLVYEFMPKGSLESHLFRRNDPFPWDLRIKIVIGAARGLAFLH-SLQREVIYRDFKASNILL 226          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.112e-21
Identity = 65/153 (42.48%), Postives = 91/153 (59.48%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGY-GIEGGMHIVLELSPNGSLASLLYGMK---EKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            K F+  ELQ AT+NFS +N++G+GG+ +VYKG L +   VA+KRLT   +    A F  E+ +++   H N  +L+G+   +    +V     N SLA  L  +K     L W  R +IALG A G  YLHE C  +IIHRD+KAA++LL ED
Sbjct:  276 KRFAWRELQLATDNFSEKNVLGQGGFGKVYKGVLPDNTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTQTERLLVYPFMQNLSLAHRLREIKAGDPVLDWETRKRIALGAARGFEYLHEHCNPKIIHRDVKAANVLLDED 428          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: Y2197_ARATH (Probable protein kinase At2g41970 OS=Arabidopsis thaliana GN=At2g41970 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.112e-21
Identity = 64/180 (35.56%), Postives = 103/180 (57.22%), Query Frame = 1
Query:  355 PRNLFVNSYDSQSPQKIF-------SLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHIVL-ELSPNGSLASLLYGMK--------EKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            PRN   N+  S +P K+        +L EL     NF  + LIG+G Y  V+ G+ + G+ VAIK+L   +++E  +DF S+L +++ + H +  +LLGY +E    I++ + +  GSL  +L+G K          L W  R KIA G A+GL +LHE  Q  I+HRD++++++LL +D
Sbjct:   39 PRN--PNAPRSGAPAKVLPIEIPSVALDELNRMAGNFGNKALIGEGSYGRVFCGKFK-GEAVAIKKLDASSSEEPDSDFTSQLSVVSRLKHDHFVELLGYCLEANNRILIYQFATKGSLHDVLHGRKGVQGAEPGPVLNWNQRVKIAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDD 215          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: WAKLH_ARATH (Wall-associated receptor kinase-like 9 OS=Arabidopsis thaliana GN=WAKL9 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.112e-21
Identity = 60/183 (32.79%), Postives = 105/183 (57.38%), Query Frame = 1
Query:  307 KLSIRRSSSMREGIDMPRNLFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKEK---LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTE 843
            KL+ ++    R G  + +   +++        +FS  EL+ AT NFS   ++G+GG   VYKG L +G++VA+K+ ++   ++ + +F++E+ I++ ++H N  KLLG  +E  + + V E  PNG+L   L+   ++     W IR +IA+ +A  L YLH      I HRD+K+ +I+L E
Sbjct:  402 KLNQKKKFFKRNGGLLLQQQLISTVGMVEKTIVFSSRELEKATENFSSNRILGQGGQGTVYKGMLVDGRIVAVKK-SKVVDEDKLEEFINEVVILSQINHRNIVKLLGCCLETKVPVLVYEFIPNGNLFEHLHDEFDENIMATWNIRLRIAIDIAGALSYLHSSASSPIYHRDVKSTNIMLDE 583          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.112e-21
Identity = 60/152 (39.47%), Postives = 87/152 (57.24%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIAD-FLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKEK---LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            +++  LQ ATN+FS EN+IG+G    VY+    NG+++AIK++          D FL  +  M+ + HPN   L GY  E G  + V E   NG+L   L+   ++   L W  R K+ALG A+ L YLHE C   I+HR+ K+A+ILL E+
Sbjct:  383 YTVSSLQVATNSFSQENIIGEGSLGRVYRAEFPNGKIMAIKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVPLAGYCTEHGQRLLVYEYVGNGNLDDTLHTNDDRSMNLTWNARVKVALGTAKALEYLHEVCLPSIVHRNFKSANILLDEE 534          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: RLK7_ARATH (Receptor-like protein kinase At5g59670 OS=Arabidopsis thaliana GN=At5g59670 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.112e-21
Identity = 64/180 (35.56%), Postives = 100/180 (55.56%), Query Frame = 1
Query:  319 RRSSSMREGIDMP-RNLFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGG-MHIVLELSPNGSLASLLYGM--KEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            ++ S++ +G+ +P R   V+   S    K F+  E+   T NF  + ++GKGG+  VY G ++  + VA+K L++ +      +F +E+ ++  V H N   L+GY  EG  + +V E  PNG L   L G      + W IR +IAL  A GL YLH GC   ++HRD+K A+ILL E+
Sbjct:  524 KKMSTIVKGLRLPPRTSMVDVTFSNKKSKRFTYSEVVQVTKNF--QRVLGKGGFGMVYHGTVKGSEQVAVKVLSQSSTQGS-KEFKAEVDLLLRVHHTNLVSLVGYCCEGDYLALVYEFLPNGDLKQHLSGKGGNSIINWSIRLRIALEAALGLEYLHIGCTPPMVHRDVKTANILLDEN 700          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: SUB_ARATH (Protein STRUBBELIG OS=Arabidopsis thaliana GN=SUB PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.453e-21
Identity = 58/162 (35.80%), Postives = 94/162 (58.02%), Query Frame = 1
Query:  367 FVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRG-TADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLY---GMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILL 837
            F    +S S   +F++  LQ  TNNFS EN+IG+G    VY+  LR+G+ +A+K+L+      +   +FL+ +  +  +   +  +LLGY  E G   +V E  PNGSL   L+    + +KL W +R  IALG ++ L +LHE CQ  ++H++ K++ +LL
Sbjct:  472 FPPGLNSSSSATVFTIASLQQYTNNFSEENIIGEGSIGNVYRAELRHGKFLAVKKLSNTINRTQSDGEFLNLVSNVLKLKRGHILELLGYCNEFGQRLLVYEYCPNGSLQDALHLDRKLHKKLTWNVRINIALGASKALQFLHEVCQPPVVHQNFKSSKVLL 633          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: Y5487_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g48740 OS=Arabidopsis thaliana GN=At5g48740 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.897e-21
Identity = 63/154 (40.91%), Postives = 95/154 (61.69%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIAD-FLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKEK---LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            +IFS  E++SAT NF  + +IG+G +  VY+G+L +G+ VA+K   R    ++ AD F++E+ +++ + H N     G+  E    I V E    GSLA  LYG + K   L W  R K+A+  A+GL YLH G + RIIHRD+K+++ILL +D
Sbjct:  594 RIFSHKEIKSATRNF--KEVIGRGSFGAVYRGKLPDGKQVAVK--VRFDRTQLGADSFINEVHLLSQIRHQNLVSFEGFCYEPKRQILVYEYLSGGSLADHLYGPRSKRHSLNWVSRLKVAVDAAKGLDYLHNGSEPRIIHRDVKSSNILLDKD 743          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: Y5900_ARATH (Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana GN=At5g39000 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.478e-21
Identity = 62/153 (40.52%), Postives = 94/153 (61.44%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNG-QLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGG-MHIVLELSPNGSLASLLYGMKE----KLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            FS++E++SATN+F  + +IG GG+  VYKG++  G  LVA+KRL   T+++   +F +EL +++ + H +   L+GY  E   M +V E  P+G+L   L+   +     L W  R +I +G A GL YLH G +  IIHRDIK  +ILL E+
Sbjct:  506 FSIFEIKSATNDFEDKLIIGVGGFGSVYKGQIDGGATLVAVKRL-EITSNQGAKEFETELEMLSKLRHVHLVSLIGYCDEDNEMVLVYEYMPHGTLKDHLFRRDKTSDPPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDEN 657          
The following BLAST results are available for this feature:
BLAST of FC929045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 294
Match NameE-valueIdentityDescription
THE1_ARATH8.517e-2239.74Receptor-like protein kinase THESEUS 1 OS=Arabidop... [more]
CX32_ARATH8.517e-2237.65Probable serine/threonine-protein kinase Cx32, chl... [more]
Y5129_ARATH1.112e-2142.48Probable LRR receptor-like serine/threonine-protei... [more]
Y2197_ARATH1.112e-2135.56Probable protein kinase At2g41970 OS=Arabidopsis t... [more]
WAKLH_ARATH1.112e-2132.79Wall-associated receptor kinase-like 9 OS=Arabidop... [more]
SRF8_ARATH1.112e-2139.47Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsi... [more]
RLK7_ARATH1.112e-2135.56Receptor-like protein kinase At5g59670 OS=Arabidop... [more]
SUB_ARATH1.453e-2135.80Protein STRUBBELIG OS=Arabidopsis thaliana GN=SUB ... [more]
Y5487_ARATH1.897e-2140.91Probable LRR receptor-like serine/threonine-protei... [more]
Y5900_ARATH2.478e-2140.52Putative receptor-like protein kinase At5g39000 OS... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1DD03RM2 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH1DD03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929045 ID=FC929045; Name=FC929045; organism=Citrus clementina; type=EST; length=847bp
ATTTTAGTTTCTTTTTTGACTGAGATAAGAGGACGGGACAAAGAAACAGA
ATTTAGAATGCTCTGTTCTCATCCCCTGTTTCTGGTCCAGATTTTATAAT
ATCTGGACATGGAGAAGAAGGAAGATTCATGCTCGCCGGTTGGGGTTCTT
GAGGACTATTTTCGAAGCGAAGACTCCGAAACATGTTCTTCAAAAGAACC
ATGCTCTGAAACTAAGCCGGAATCCAAATCCAATTCTCGCTGGCATTTAT
TCTACGACTTATTCAGAAACAAATCGAAGAAATCATTAGTCACATTGTAT
CCCCTCAAGCTTTCAATAAGAAGAAGCAGTAGTATGAGAGAGGGCATTGA
TATGCCGAGGAATCTTTTTGTAAATTCCTACGATTCACAGTCTCCCCAGA
AGATTTTCTCCCTCTATGAGCTGCAATCCGCCACCAACAATTTCAGCTTC
GAAAATTTGATTGGAAAGGGAGGTTATGCTGAAGTTTACAAAGGGCGTTT
GAGAAATGGGCAGCTTGTGGCAATCAAACGGCTAACAAGAGGTACAGCAG
ATGAGATTATAGCGGACTTTTTATCGGAGCTTGGGATTATGGCTCATGTC
GATCATCCTAATACTGCTAAGTTATTAGGATATGGGATTGAAGGAGGCAT
GCACATTGTTCTTGAATTGTCTCCTAATGGAAGCTTAGCTTCTCTCCTTT
ATGGTATGAAGGAGAAACTGAAATGGGGTATCAGGTATAAGATTGCGTTA
GGGGTAGCCGAAGGCTTACTTTATCTTCATGAGGGCTGTCAGAGGAGAAT
CATTCATAGAGATATTAAAGCTGCCCATATTTTGCTCACTGAGGACT
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