FC929083

Overview
NameFC929083
Unique NameFC929083
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length798
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929083 vs. ExPASy Swiss-Prot
Match: PPIB_YARLI (Peptidyl-prolyl cis-trans isomerase B OS=Yarrowia lipolytica GN=CPR2 PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.163e-40
Identity = 86/146 (58.90%), Postives = 97/146 (66.44%), Query Frame = 3
Query:  360 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSEFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTANTEWLDGKHVVFGQVVEGMDVVKAIE 797
            KV+FD+  G +  G+IVM L+ DV P+T ENFRALCTGE G G       YKGS FHRVI  FM Q            ESIYG +F DENF  KHT P  LSMANAG  TNGSQFF+ T  T WLDGKHVVFG+V+EG D+V AIE
Sbjct:   33 KVYFDIKQGEESLGKIVMGLYGDVVPKTVENFRALCTGETGKG-------YKGSKFHRVIKNFMIQGGDFTRGDGTGGESIYGRKFPDENFQLKHTKPYKLSMANAGRDTNGSQFFITTVVTSWLDGKHVVFGEVLEGQDIVDAIE 171          
BLAST of FC929083 vs. ExPASy Swiss-Prot
Match: PPIB_CHICK (Peptidyl-prolyl cis-trans isomerase B OS=Gallus gallus GN=PPIB PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.163e-40
Identity = 84/146 (57.53%), Postives = 97/146 (66.44%), Query Frame = 3
Query:  360 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSEFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTANTEWLDGKHVVFGQVVEGMDVVKAIE 797
            KVFFD+ VG + AGR+V+ LF    P+T ENF AL TGEKG G       +KGS FHRVI  FM Q            +SIYG  F DENF  KH GPG +SMANAG  TNGSQFF+ T  T WLDGKHVVFG+V+EGMDVV+ +E
Sbjct:   36 KVFFDLRVGEEDAGRVVIGLFGKTVPKTVENFVALATGEKGFG-------FKGSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGDRFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMDVVRKVE 174          
BLAST of FC929083 vs. ExPASy Swiss-Prot
Match: CYP1_BRUMA (Peptidyl-prolyl cis-trans isomerase 1 OS=Brugia malayi GN=CYP-1 PE=1 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.689e-40
Identity = 86/153 (56.21%), Postives = 98/153 (64.05%), Query Frame = 3
Query:  342 SKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGK-SGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSEFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTANTEWLDGKHVVFGQVVEGMDVVKAIE 797
            SK    +VF D+T+ G  AGRIVMEL+ D+ PRT  NF  LCTG  G GK SGKPLHYKGS+FHRVI  FM Q            ESIYG  F DE FV KH  P ++SMAN GP TNGSQFF+ T     L+  HVVFG+VV G +VV  IE
Sbjct:    2 SKKDRRRVFLDVTIDGNLAGRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLHYKGSTFHRVIKNFMIQGGDFTKGDGTGGESIYGGMFDDEEFVMKHDEPFVVSMANKGPNTNGSQFFITTTPAPHLNNIHVVFGKVVSGQEVVTKIE 154          
BLAST of FC929083 vs. ExPASy Swiss-Prot
Match: PPIB_GIBZE (Peptidyl-prolyl cis-trans isomerase B OS=Gibberella zeae GN=CPR2 PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.818e-40
Identity = 82/146 (56.16%), Postives = 97/146 (66.44%), Query Frame = 3
Query:  360 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSEFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTANTEWLDGKHVVFGQVVEGMDVVKAIE 797
            KV+FD+T G QP GR+VM L+    P T ENFRAL TGEKG G       Y+GS+FHRVI  FM Q            +SIYG  F DENF  KHT  G+LSMANAG  TNGSQFF+ T  T WLDGKHVVFG+V+EG ++++ IE
Sbjct:   36 KVYFDITQGDQPLGRVVMGLYGKTVPETTENFRALATGEKGFG-------YEGSAFHRVIKNFMIQGGDFTKGDGTGGKSIYGDRFKDENFKLKHTKKGLLSMANAGRDTNGSQFFITTVVTSWLDGKHVVFGEVLEGYEIIEKIE 174          
BLAST of FC929083 vs. ExPASy Swiss-Prot
Match: PPIB_NEUCR (Peptidyl-prolyl cis-trans isomerase B OS=Neurospora crassa GN=cpr-2 PE=3 SV=3)

HSP 1 Score: 164.466 bits (415), Expect = 6.293e-40
Identity = 84/146 (57.53%), Postives = 99/146 (67.81%), Query Frame = 3
Query:  360 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSEFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTANTEWLDGKHVVFGQVVEGMDVVKAIE 797
            KV+FD+  G +P GRIVM L+    P+TAENFRAL TGEKG G       Y+GS+FHRVI  FM Q            +SIYG +F DENF  KH+  G+LSMANAG  TNGSQFF+ T  T WLDGKHVVFG+V+EG DVV+ IE
Sbjct:   36 KVYFDIEQGDKPLGRIVMGLYGKTVPKTAENFRALATGEKGFG-------YEGSTFHRVIKQFMIQGGDFTKGDGTGGKSIYGDKFPDENFKLKHSKKGLLSMANAGKDTNGSQFFITTVITSWLDGKHVVFGEVLEGYDVVEKIE 174          
BLAST of FC929083 vs. ExPASy Swiss-Prot
Match: PPIB_ASPFU (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus fumigatus GN=cpr2 PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 6.293e-40
Identity = 83/146 (56.85%), Postives = 100/146 (68.49%), Query Frame = 3
Query:  360 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSEFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTANTEWLDGKHVVFGQVVEGMDVVKAIE 797
            KVFFD+  G +P GRIV+ L+    P+TAENFRAL TGEKG G       Y+GS+FHRVI  FM Q            +SIYG +FADENF  +HT  G+LSMANAG  TNGSQFF+ T  T WLDG+HVVFG+V+EG +VV+ IE
Sbjct:   37 KVFFDIEHGDKPLGRIVLGLYGKTVPKTAENFRALATGEKGFG-------YEGSTFHRVIKSFMIQGGDFTRGDGTGGKSIYGEKFADENFKLRHTRKGLLSMANAGKDTNGSQFFITTVPTPWLDGRHVVFGEVLEGYEVVEQIE 175          
BLAST of FC929083 vs. ExPASy Swiss-Prot
Match: PPIB2_RHIOR (Peptidyl-prolyl cis-trans isomerase B2 OS=Rhizopus oryzae GN=cyp9 PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.402e-39
Identity = 84/161 (52.17%), Postives = 103/161 (63.98%), Query Frame = 3
Query:  315 FVFFSPINQSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSEFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTANTEWLDGKHVVFGQVVEGMDVVKAIE 797
            F F S  ++  +   K++FD+  G +  GRIV  L+    P+TAENF+ L TG+ G G       YKGS+FHRVI  FM Q            +SIYGS F DENF  +HT PG+LSMANAGP +NGSQFF+ T  T WLDGKHVVFG+V+EGMDVV  IE
Sbjct:   20 FRFVSAESKGPVITDKIYFDIKQGEESLGRIVFGLYGKTVPKTAENFKQLATGQNGYG-------YKGSTFHRVIDQFMIQGGDFTNHDGTGGKSIYGSRFPDENFKLRHTVPGLLSMANAGPDSNGSQFFITTVVTSWLDGKHVVFGKVLEGMDVVTKIE 173          
BLAST of FC929083 vs. ExPASy Swiss-Prot
Match: PPIB1_RHIOR (Peptidyl-prolyl cis-trans isomerase B1 OS=Rhizopus oryzae GN=cyp8 PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.831e-39
Identity = 84/161 (52.17%), Postives = 103/161 (63.98%), Query Frame = 3
Query:  315 FVFFSPINQSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSEFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTANTEWLDGKHVVFGQVVEGMDVVKAIE 797
            F F S   +  +   K++FD+  G +  GRIV+ L+    P+TAENF+ L TGE G G       YKGS+FHRVI  FM Q            +SIYG+ FADENF  +H+ PG+LSMANAG  TNGSQFF+ T  T WLDGKHVVFG+V+EGMDVV  IE
Sbjct:   20 FSFVSAEGRGPVITDKIYFDIKQGDESLGRIVLGLYGKTVPKTAENFKQLATGENGYG-------YKGSTFHRVIKKFMIQGGDFTNHDGTGGKSIYGNRFADENFKLRHSTPGLLSMANAGRDTNGSQFFITTVVTPWLDGKHVVFGRVLEGMDVVTKIE 173          
BLAST of FC929083 vs. ExPASy Swiss-Prot
Match: PPIB_ASPNG (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus niger GN=cypB PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.391e-39
Identity = 81/146 (55.48%), Postives = 99/146 (67.81%), Query Frame = 3
Query:  360 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSEFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTANTEWLDGKHVVFGQVVEGMDVVKAIE 797
            KVFFD+  G +P GR+V+ L+    P+TAENFRAL TGEKG G       Y+GS+FHRVI  FM Q            +SIYG +FADENF  +HT  G+LSMANAG  TNGSQFF+ T  T WLDG+HVVFG+V+EG ++V  IE
Sbjct:   36 KVFFDIEHGDKPLGRVVLGLYGKTVPKTAENFRALATGEKGFG-------YEGSTFHRVIKDFMIQGGDFTRGDGTGGKSIYGEKFADENFKLRHTRKGLLSMANAGKDTNGSQFFITTVPTPWLDGRHVVFGEVLEGYEIVAQIE 174          
BLAST of FC929083 vs. ExPASy Swiss-Prot
Match: PPIB_RAT (Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus GN=Ppib PE=2 SV=3)

HSP 1 Score: 162.155 bits (409), Expect = 3.123e-39
Identity = 80/146 (54.79%), Postives = 93/146 (63.70%), Query Frame = 3
Query:  360 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSEFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTANTEWLDGKHVVFGQVVEGMDVVKAIE 797
            KV+FD  +G +P GR+   LF    P+T +NF AL TGEKG G       YK S FHRVI  FM Q            +SIYG  F DENF  KH GPG +SMANAG  TNGSQFF+ T  T WLDGKHVVFG+V+EGMDVV+ +E
Sbjct:   45 KVYFDFQIGDEPVGRVTFGLFGKTVPKTVDNFVALATGEKGFG-------YKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTSWLDGKHVVFGKVLEGMDVVRKVE 183          
The following BLAST results are available for this feature:
BLAST of FC929083 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 232
Match NameE-valueIdentityDescription
PPIB_YARLI2.163e-4058.90Peptidyl-prolyl cis-trans isomerase B OS=Yarrowia ... [more]
PPIB_CHICK2.163e-4057.53Peptidyl-prolyl cis-trans isomerase B OS=Gallus ga... [more]
CYP1_BRUMA3.689e-4056.21Peptidyl-prolyl cis-trans isomerase 1 OS=Brugia ma... [more]
PPIB_GIBZE4.818e-4056.16Peptidyl-prolyl cis-trans isomerase B OS=Gibberell... [more]
PPIB_NEUCR6.293e-4057.53Peptidyl-prolyl cis-trans isomerase B OS=Neurospor... [more]
PPIB_ASPFU6.293e-4056.85Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
PPIB2_RHIOR1.402e-3952.17Peptidyl-prolyl cis-trans isomerase B2 OS=Rhizopus... [more]
PPIB1_RHIOR1.831e-3952.17Peptidyl-prolyl cis-trans isomerase B1 OS=Rhizopus... [more]
PPIB_ASPNG2.391e-3955.48Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
PPIB_RAT3.123e-3954.79Peptidyl-prolyl cis-trans isomerase B OS=Rattus no... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3CB12RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3CB12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929083 ID=FC929083; Name=FC929083; organism=Citrus clementina; type=EST; length=798bp
GGCACGAGGTTGCTGGCGACGGCAAGGAGAATGGCCTCATTAGCAACCAC
TTCAGAGTCCAGGCGGTACTGCTGGCCTAACATGTAATGCCCCACGTAGT
CTGCACATTTTTCGGGAACAGTCGCCCATCCTATAACGTTATTAGTTTCC
ACTCCGAGTCGCCAACTCAGGCAGGACAAGCCGGGCACATCGTTGTTCCG
GGAACCGGCTTTCGGTCGGAGAAGATGAATCTGATGGGGGATGTCCATGC
TAAATCCATGGGATGTTGCTGCCTCGTGCCGAATTCGGCACGAGGATCAG
AAGTCCGTGTTTAGTTTGTTTTTTTCTCTCCAATCAACCAATCAAAAATG
CCAAACCCCAAAGTGTTCTTCGACATGACCGTCGGCGGTCAGCCCGCCGG
CAGGATCGTGATGGAGCTCTTCGCCGATGTCACCCCCCGAACCGCCGAGA
ACTTCCGCGCCCTCTGCACCGGCGAGAAAGGCATCGGCAAGTCCGGCAAG
CCACTCCACTACAAGGGCTCGTCCTTCCACCGTGTGATCCCCGGATTCAT
GTGCCAGGGGGGAGACTTCACCGCCGGAAACGGAACCGGAGGCGAATCAA
TCTACGGCTCAGAATTCGCCGATGAGAACTTCGTGAAGAAGCACACCGGC
CCCGGAATCCTCTCCATGGCGAATGCCGGACCCGGAACCAACGGATCTCA
GTTCTTCGTCTGTACGGCCAACACCGAGTGGCTCGATGGGAAGCACGTTG
TGTTCGGTCAAGTCGTCGAAGGAATGGACGTCGTCAAGGCCATCGAGA
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