FC929083

Overview
NameFC929083
Unique NameFC929083
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length798
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929083 vs. ExPASy Swiss-Prot
Match: PPIA_CANAL (Peptidyl-prolyl cis-trans isomerase OS=Candida albicans GN=CYP1 PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.447e-44
Identity = 87/145 (60.00%), Postives = 104/145 (71.72%), Query Frame = 3
Query:  363 VFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSEFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTANTEWLDGKHVVFGQVVEGMDVVKAIE 797
            V+FD++  GQ  G+I  +L+ DV P+TAENFRALCTGEKG G       YKGS FHRVIP FM Q            +SIYG++FADENFVK+H  PG+LSMANAGP TNGSQFF+ T    WLDGKHVVFG+V +G+D+VK IE
Sbjct:    4 VYFDVSADGQKLGKITFKLYDDVVPKTAENFRALCTGEKGFG-------YKGSIFHRVIPQFMLQGGDFTNFNGTGGKSIYGTKFADENFVKRHDRPGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGEVTDGLDIVKKIE 141          
BLAST of FC929083 vs. ExPASy Swiss-Prot
Match: PPIH_GIBZE (Peptidyl-prolyl cis-trans isomerase H OS=Gibberella zeae GN=CYP3 PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 4.211e-44
Identity = 91/156 (58.33%), Postives = 105/156 (67.31%), Query Frame = 3
Query:  342 SKMP---NPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYG-SEFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTANTEWLDGKHVVFGQVVEGMDVVKAIE 797
            +K+P   NP VFFD+T+GG+P GRI  ELF DV P+TAENFR  CTGE      G+P  YKGS FHR+IP FMCQ              I+G   F DENF  KH  PG+LSMANAGP TNGSQFF+ T  T +LD KHVVFG+V EGMDVVK +E
Sbjct:    4 TKLPESGNPLVFFDITIGGEPLGRITFELFKDVVPKTAENFRQFCTGESKT-PVGRPQGYKGSKFHRIIPNFMCQGGDFLNGDGTGSTCIWGFKSFEDENFTLKHDQPGLLSMANAGPNTNGSQFFITTVPTPFLDNKHVVFGKVFEGMDVVKKME 158          
BLAST of FC929083 vs. ExPASy Swiss-Prot
Match: PPIH_EMENI (Peptidyl-prolyl cis-trans isomerase H OS=Emericella nidulans GN=cyp3 PE=3 SV=2)

HSP 1 Score: 177.563 bits (449), Expect = 7.183e-44
Identity = 88/158 (55.70%), Postives = 111/158 (70.25%), Query Frame = 3
Query:  327 SPINQSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGS-EFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTANTEWLDGKHVVFGQVVEGMDVVKAIE 797
            S + Q+   NP VFFD+ +GG+P GR+ +ELFADVTPRTAENFR  CTGE    + G+P  YKGS FHRVI  FM Q             +IYG+ +F+DENF  +H  PG+LSMAN+GP TNG QFF+ T  T +L+GKHVVFGQV++GMD+V+ IE
Sbjct:    6 SAVPQTTSSNPIVFFDVALGGEPLGRLKLELFADVTPRTAENFRQFCTGESK-NQQGRPQGYKGSKFHRVIKDFMIQGGDFVNGDGTGSCTIYGTPKFSDENFTLRHDRPGLLSMANSGPNTNGCQFFITTTATPFLNGKHVVFGQVIDGMDIVRMIE 162          
BLAST of FC929083 vs. ExPASy Swiss-Prot
Match: PPIE_SCHJA (Peptidyl-prolyl cis-trans isomerase E (Fragment) OS=Schistosoma japonicum PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 7.183e-44
Identity = 85/147 (57.82%), Postives = 103/147 (70.07%), Query Frame = 3
Query:  357 PKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSEFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTANTEWLDGKHVVFGQVVEGMDVVKAIE 797
            P+VFFD+ +G    GRIVMEL +D+ PRTAENFRALCTG++G G       Y    FHRVIP FMCQ            +SIYG +F DENF  +H G G+LSMAN+GP TNGSQFF+CT   +WLDGKHVVFG+VV+G +VVK +E
Sbjct:   18 PRVFFDIRIGNADRGRIVMELRSDIVPRTAENFRALCTGDRGFG-------YHNCCFHRVIPQFMCQGGDFVKGDGTGGKSIYGRKFDDENFQLRHEGFGVLSMANSGPNTNGSQFFICTTKCDWLDGKHVVFGRVVDGQNVVKKME 157          
BLAST of FC929083 vs. ExPASy Swiss-Prot
Match: CYPH_YEAST (Peptidyl-prolyl cis-trans isomerase OS=Saccharomyces cerevisiae GN=CPR1 PE=1 SV=3)

HSP 1 Score: 177.178 bits (448), Expect = 9.382e-44
Identity = 85/146 (58.22%), Postives = 101/146 (69.18%), Query Frame = 3
Query:  360 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSEFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTANTEWLDGKHVVFGQVVEGMDVVKAIE 797
            +V+FD+   GQP GR+V +L+ D+ P+TAENFRALCTGEKG G       Y GS FHRVIP FM Q            +SIYG +F DENF K H  PG+LSMANAGP TNGSQFF+ T    WLDGKHVVFG+VV+G D+VK +E
Sbjct:    3 QVYFDVEADGQPIGRVVFKLYNDIVPKTAENFRALCTGEKGFG-------YAGSPFHRVIPDFMLQGGDFTAGNGTGGKSIYGGKFPDENFKKHHDRPGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGEVVDGYDIVKKVE 141          
BLAST of FC929083 vs. ExPASy Swiss-Prot
Match: PPIE_DROME (Peptidyl-prolyl cis-trans isomerase E OS=Drosophila melanogaster GN=cyp33 PE=1 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.225e-43
Identity = 88/155 (56.77%), Postives = 105/155 (67.74%), Query Frame = 3
Query:  333 INQSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSEFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTANTEWLDGKHVVFGQVVEGMDVVKAIE 797
            I +++  NP+VFFD+ +GG  AGRIVM L ADV P+TAENFR LCT E+G G       YKG SFHRVIP FMCQ            +SIYG +F DENF  KH   G LSMAN+G  TNGSQFF+CT  T+WLD KHVVFG V+ G +VV+ +E
Sbjct:  131 IEKAEKRNPQVFFDIRIGGNDAGRIVMLLRADVVPKTAENFRQLCTHEQGYG-------YKGCSFHRVIPEFMCQGGDFTNNNGTGGKSIYGKKFNDENFNLKHNSFGTLSMANSGANTNGSQFFICTTKTDWLDNKHVVFGHVISGAEVVRKME 278          
BLAST of FC929083 vs. ExPASy Swiss-Prot
Match: PPID_YARLI (Peptidyl-prolyl cis-trans isomerase D OS=Yarrowia lipolytica GN=CPR6 PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.600e-43
Identity = 86/150 (57.33%), Postives = 104/150 (69.33%), Query Frame = 3
Query:  348 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSEFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTANTEWLDGKHVVFGQVVEGMDVVKAIE 797
            M NP+VFF++ +GG+  G+I  ELFAD  P+TAENFRALCTGEKG  ++G PLH+KGSSFHRVI  FM Q            ESIYG +F DE F   H  P +LSMANAGP TNGSQFF+ T  T  LD KHVVFG+++ G  +V+ IE
Sbjct:    1 MTNPRVFFEVAIGGKTIGKIYFELFADKVPKTAENFRALCTGEKGNTQAGIPLHFKGSSFHRVIKDFMVQGGDFTAGNGTGGESIYGEKFPDEAFPYPHDQPFLLSMANAGPNTNGSQFFITTTETPHLDNKHVVFGKLLSGKGIVRQIE 150          
BLAST of FC929083 vs. ExPASy Swiss-Prot
Match: CYPB_VICFA (Peptidyl-prolyl cis-trans isomerase, chloroplastic OS=Vicia faba PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.600e-43
Identity = 84/146 (57.53%), Postives = 101/146 (69.18%), Query Frame = 3
Query:  360 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSEFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTANTEWLDGKHVVFGQVVEGMDVVKAIE 797
            K+FFD+ +GG+ AGRIV+ LF D  P+T ENF+ L TG KG G       Y+GS FHR+IP FM Q             SIYGS+F DE+F  KH GPG+LSMANAGP TNGSQFF+CT  T WLD +HVVFG V+EG+DVVK +E
Sbjct:   83 KIFFDIEIGGESAGRIVIGLFGDAVPKTVENFKTLSTGAKGYG-------YQGSFFHRIIPNFMIQGGDFTEGNGTGGVSIYGSKFEDESFDLKHVGPGVLSMANAGPNTNGSQFFICTVPTPWLDNRHVVFGHVIEGLDVVKQLE 221          
BLAST of FC929083 vs. ExPASy Swiss-Prot
Match: PPIH_ASPOR (Peptidyl-prolyl cis-trans isomerase H OS=Aspergillus oryzae GN=cyp3 PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 2.090e-43
Identity = 89/155 (57.42%), Postives = 105/155 (67.74%), Query Frame = 3
Query:  336 NQSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGS-EFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTANTEWLDGKHVVFGQVVEGMDVVKAIE 797
            + +K PNP VFFD+T+GG+  GRI MELF  +TPRTAENFR  CTGE      G+P  YK S FHRVI  FM Q             +IYG+  F DENF+ KH  PG+LSMAN+GP TNG QFF+ T  T +L+ KHVVFGQVVEGMDVV+ IE
Sbjct:    7 SSAKTPNPVVFFDITLGGESLGRIKMELFTSITPRTAENFRQFCTGESK-SPQGRPQGYKNSKFHRVIKDFMIQGGDFVNGDGTGSRTIYGTPRFQDENFILKHDQPGLLSMANSGPNTNGCQFFITTTATPFLNNKHVVFGQVVEGMDVVRMIE 160          
BLAST of FC929083 vs. ExPASy Swiss-Prot
Match: PPIH_ASPFU (Peptidyl-prolyl cis-trans isomerase H OS=Aspergillus fumigatus GN=cyp3 PE=3 SV=2)

HSP 1 Score: 175.252 bits (443), Expect = 3.565e-43
Identity = 91/149 (61.07%), Postives = 104/149 (69.80%), Query Frame = 3
Query:  354 NPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGS-EFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTANTEWLDGKHVVFGQVVEGMDVVKAIE 797
            NP VFFD+ +GG P GRI MELFADVTPRTAENFR  CTGE      GKP  YK S FHRVI  FM Q             +IYG+ +FADENFV KH   G+LSMAN+GP TNG QFF+ T  T +L+GKHVVFGQVV+GMD+V+ IE
Sbjct:   13 NPIVFFDIALGGVPLGRIKMELFADVTPRTAENFRRFCTGESK-NSQGKPQGYKNSKFHRVIKDFMIQGGDFVNGDGTGSCTIYGTPKFADENFVLKHDRAGVLSMANSGPNTNGCQFFITTTATPFLNGKHVVFGQVVDGMDIVRMIE 160          
The following BLAST results are available for this feature:
BLAST of FC929083 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 232
Match NameE-valueIdentityDescription
PPIA_CANAL1.447e-4460.00Peptidyl-prolyl cis-trans isomerase OS=Candida alb... [more]
PPIH_GIBZE4.211e-4458.33Peptidyl-prolyl cis-trans isomerase H OS=Gibberell... [more]
PPIH_EMENI7.183e-4455.70Peptidyl-prolyl cis-trans isomerase H OS=Emericell... [more]
PPIE_SCHJA7.183e-4457.82Peptidyl-prolyl cis-trans isomerase E (Fragment) O... [more]
CYPH_YEAST9.382e-4458.22Peptidyl-prolyl cis-trans isomerase OS=Saccharomyc... [more]
PPIE_DROME1.225e-4356.77Peptidyl-prolyl cis-trans isomerase E OS=Drosophil... [more]
PPID_YARLI1.600e-4357.33Peptidyl-prolyl cis-trans isomerase D OS=Yarrowia ... [more]
CYPB_VICFA1.600e-4357.53Peptidyl-prolyl cis-trans isomerase, chloroplastic... [more]
PPIH_ASPOR2.090e-4357.42Peptidyl-prolyl cis-trans isomerase H OS=Aspergill... [more]
PPIH_ASPFU3.565e-4361.07Peptidyl-prolyl cis-trans isomerase H OS=Aspergill... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3CB12RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3CB12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929083 ID=FC929083; Name=FC929083; organism=Citrus clementina; type=EST; length=798bp
GGCACGAGGTTGCTGGCGACGGCAAGGAGAATGGCCTCATTAGCAACCAC
TTCAGAGTCCAGGCGGTACTGCTGGCCTAACATGTAATGCCCCACGTAGT
CTGCACATTTTTCGGGAACAGTCGCCCATCCTATAACGTTATTAGTTTCC
ACTCCGAGTCGCCAACTCAGGCAGGACAAGCCGGGCACATCGTTGTTCCG
GGAACCGGCTTTCGGTCGGAGAAGATGAATCTGATGGGGGATGTCCATGC
TAAATCCATGGGATGTTGCTGCCTCGTGCCGAATTCGGCACGAGGATCAG
AAGTCCGTGTTTAGTTTGTTTTTTTCTCTCCAATCAACCAATCAAAAATG
CCAAACCCCAAAGTGTTCTTCGACATGACCGTCGGCGGTCAGCCCGCCGG
CAGGATCGTGATGGAGCTCTTCGCCGATGTCACCCCCCGAACCGCCGAGA
ACTTCCGCGCCCTCTGCACCGGCGAGAAAGGCATCGGCAAGTCCGGCAAG
CCACTCCACTACAAGGGCTCGTCCTTCCACCGTGTGATCCCCGGATTCAT
GTGCCAGGGGGGAGACTTCACCGCCGGAAACGGAACCGGAGGCGAATCAA
TCTACGGCTCAGAATTCGCCGATGAGAACTTCGTGAAGAAGCACACCGGC
CCCGGAATCCTCTCCATGGCGAATGCCGGACCCGGAACCAACGGATCTCA
GTTCTTCGTCTGTACGGCCAACACCGAGTGGCTCGATGGGAAGCACGTTG
TGTTCGGTCAAGTCGTCGAAGGAATGGACGTCGTCAAGGCCATCGAGA
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