FC929217

Overview
NameFC929217
Unique NameFC929217
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length812
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929217 vs. ExPASy Swiss-Prot
Match: AQP8_NOTAL (Aquaporin-8 OS=Notomys alexis GN=AQP8 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.552e-16
Identity = 57/200 (28.50%), Postives = 93/200 (46.50%), Query Frame = 1
Query:  196 VDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAF--QKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGP-----FIGAAIAAF 774
            ++     G+L  A A G  + +++     ISGGH NPAV+  + +   +  +  + Y ++Q  G + G  L K    ++ ++   G     + +       L  EII T +LV  V        +  +  +  LAP  IGF+V +  LA   I+G  +NPAR+ G AV+      WD  W++W+GP     F+G  I  F
Sbjct:   57 IENSPDTGLLQPALAHGLALGLIIATLGNISGGHFNPAVSLAVTVIGGLKTMLLIPYWISQIFGGLIGAALAKVVSPEERFWNASGAAFAIVQEQEQVTEALGVEIILTILLVLAVCMG-----AVNEKTMGPLAPFSIGFSVIVDILAGGGISGACMNPARAFGPAVVAG---YWDFHWIYWLGPLLAGLFVGLLIRLF 248          
BLAST of FC929217 vs. ExPASy Swiss-Prot
Match: AQP8_MOUSE (Aquaporin-8 OS=Mus musculus GN=Aqp8 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.459e-15
Identity = 53/188 (28.19%), Postives = 89/188 (47.34%), Query Frame = 1
Query:  196 VDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAF--QKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFI 753
            ++     G+L  A A G  + +++     ISGGH NPAV+  + +   +  +  + Y ++Q  G + G  L K    ++ ++   G     + +       L  EII T +LV  V        +  +  +  LAP  IGF+V +  LA   I+G  +NPAR+ G AV+      WD  W++W+GP +
Sbjct:   57 IENSPNTGLLQPALAHGLALGLIIATLGNISGGHFNPAVSLAVTVIGGLKTMLLIPYWISQLFGGLIGAALAKVVSPEERFWNASGAAFAIVQEQEQVAEALGIEIILTMLLVLAVCMG-----AVNEKTMGPLAPFSIGFSVIVDILAGGSISGACMNPARAFGPAVMAG---YWDFHWIYWLGPLL 236          
BLAST of FC929217 vs. ExPASy Swiss-Prot
Match: NIP11_ORYSJ (Aquaporin NIP1-1 OS=Oryza sativa subsp. japonica GN=NIP1-1 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.488e-15
Identity = 58/188 (30.85%), Postives = 86/188 (45.74%), Query Frame = 1
Query:  226 GIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHPFI 789
            G+A  +G  + V+VY    ISG H NPAVT      R+    +   Y  AQ LGA    G ++      +  + G     +D  S    L  E I TF L++ +       R+     +  LA L +G  + +  L   PI+G  +NPARSLG A+I  +   +   W++ VGP  GA   A+ +  I
Sbjct:   82 GVAIVWGLAVMVMVYAVGHISGAHFNPAVTLAFATCRRFPWRQVPAYAAAQMLGATLAAGTLRLMFGGRHEHFPGTLPAGSDVQS----LVLEFIITFYLMFVISGVATDNRA-----IGELAGLAVGATILLNVLIAGPISGASMNPARSLGPAMIGGE---YRSIWVYIVGPVAGAVAGAWAYNII 257          
BLAST of FC929217 vs. ExPASy Swiss-Prot
Match: NIP11_MAIZE (Aquaporin NIP1-1 OS=Zea mays GN=NIP1-1 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.488e-15
Identity = 56/191 (29.32%), Postives = 89/191 (46.60%), Query Frame = 1
Query:  226 GIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTG---VGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHPFI 789
            G+A  +G  + V+VY    ISG H NPAVT     + +    +   Y++AQ LGA    G ++         +GG          TG     L  EII TF L++ +       R+     +  LA L +G  + +  L   P++G  +NPARS+G A++  +   +   W++ VGP +GA   A+ +  I
Sbjct:   78 GVAIVWGLAVMVMVYAVGHISGAHFNPAVTLAFATSGRFPWRQLPAYVLAQMLGATLASGTLRLM-------FGGRHEHFPGTLPTGSEVQSLVIEIITTFYLMFVISGVATDNRA-----IGELAGLAVGATILLNVLIAGPVSGASMNPARSVGPALVSGE---YTSIWVYVVGPVVGAVAGAWAYNLI 253          
BLAST of FC929217 vs. ExPASy Swiss-Prot
Match: GLPF_STRR6 (Glycerol uptake facilitator protein OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=glpF PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.235e-14
Identity = 65/198 (32.83%), Postives = 95/198 (47.98%), Query Frame = 1
Query:  217 GILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTG-------VGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIY------NK-DKAWDDQWLFWVGPFIGAAIA 768
            G + I   +G  + V V+ +  +S  H+NPAVT G+ L   +     + Y++AQ  GA+ G  LV    K +Y       N LA  +STG         L +EI+GTFVLV T+F+       A       +    +G  +  + L+    TG  +NPAR LG  +++      NK D  W   W+  VGP IGAA+A
Sbjct:   37 GWIVITMGWGIAVAVAVFVSGKLSPAHLNPAVTIGVALKGGLPWASVLPYILAQFAGAMLGQILVWLQFKPHYEAEENAGNILAT-FSTGPAIKDTVSNLISEILGTFVLVLTIFALGLYDFQAG------IGTFAVGTLIVGIGLSLGGTTGYALNPARDLGPRIMHSILPIPNKGDGDWSYAWIPVVGPVIGAALA 227          
BLAST of FC929217 vs. ExPASy Swiss-Prot
Match: NIP21_ORYSJ (Aquaporin NIP2-1 OS=Oryza sativa subsp. japonica GN=NIP2-1 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.613e-14
Identity = 63/195 (32.31%), Postives = 96/195 (49.23%), Query Frame = 1
Query:  223 LGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVG-----LAAEIIGTFVLVY-TVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHPFI 789
            LG + A G ++ V++Y    ISG H+NPAVT    + R    ++   Y  AQ  GAI    ++KA                  G +T VG     L  E+I TF +++ T+  ATD +       V  LA L +G AV +  +    I+G  +NPAR+LG A+  NK   +D  W++++GP +G    A+ + FI
Sbjct:   82 LGQSIAGGLIVTVMIYAVGHISGAHMNPAVTLAFAVFRHFPWIQVPFYWAAQFTGAICASFVLKAVIHPVD----------VIGTTTPVGPHWHSLVVEVIVTFNMMFVTLAVATDTRA------VGELAGLAVGSAVCITSIFAGAISGGSMNPARTLGPALASNK---FDGLWIYFLGPVMGTLSGAWTYTFI 257          
BLAST of FC929217 vs. ExPASy Swiss-Prot
Match: NIP11_ARATH (Aquaporin NIP1-1 OS=Arabidopsis thaliana GN=NIP1-1 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.613e-14
Identity = 66/254 (25.98%), Postives = 106/254 (41.73%), Query Frame = 1
Query:   28 KDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAA---EIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYH 780
            +D  +P P    D++      F + LIAEF+             + +        N+     V + GIA  +G  I VL+Y    ISG HINPAVT       +  L +   Y+++Q +G+      ++      +    G  +        G  L A   E I TF L++ +       R+     +  LA L IG  V +  L   P++   +NP RSLG A++Y     +   W++ V P +GA   A+ +
Sbjct:   32 EDIHNPRPLKKQDSLLSVSVPFLQKLIAEFLGTYF---------LVFTGCASVVVNMQNDNVVTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFASCGRFPLKQVPAYVISQVIGSTLAAATLRLLFGLDHDVCSGKHDVFIGSSPVGSDLQAFTMEFIVTFYLMFIISGVATDNRA-----IGELAGLAIGSTVLLNVLIAAPVSSASMNPGRSLGPALVYG---CYKGIWIYLVAPTLGAIAGAWVY 268          
BLAST of FC929217 vs. ExPASy Swiss-Prot
Match: AQPM_ARCFU (Probable aquaporin aqpM OS=Archaeoglobus fulgidus GN=aqpM PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.613e-14
Identity = 66/208 (31.73%), Postives = 92/208 (44.23%), Query Frame = 1
Query:  211 GVGILG-------IAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGG-GANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKD-----KAWDDQWLFWVGPFIGAAIAAFYHPFILR 795
            G+G LG       I  AF   I  ++Y    ISG HINPAVT  L+   +      V Y+VAQ +GA  G  L  A         GG GA     G   G  +  E IGTF+L+  +      +R+      P  A L IG  V  +      ITG+ +NPAR+ G    Y  D       W    ++ +GP +GA  AA+ + ++ +
Sbjct:   46 GIGALGGLGDWFAIGMAFALAIAAVIYSLGRISGAHINPAVTIALWSIGRFPGREVVPYIVAQFIGAALGSLLFLACVGPAAATVGGLGATAPFPGIGYGQAILTEAIGTFLLMLVIMGVAVDERAP-----PGFAGLVIGLTVGGIITTIGNITGSSLNPARTFGP---YLGDSLMGINLWQYFPIYVIGPIVGAVAAAWLYNYLAK 245          
BLAST of FC929217 vs. ExPASy Swiss-Prot
Match: NIP23_MAIZE (Aquaporin NIP2-3 OS=Zea mays GN=NIP2-3 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.593e-14
Identity = 58/199 (29.15%), Postives = 94/199 (47.24%), Query Frame = 1
Query:  208 AGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVG-----LAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHPFI 789
            A +  LG + A G ++ V++Y T  ISG H+NPAVT      R    ++   Y  AQ  GA+    ++KA  +               G +T  G     LA EI+ TF +++   +     R+     V  LA L +G AV +  +   P++G  +NPAR+L  AV  N    +   W++++GP +G    A+ + +I
Sbjct:   83 ARISQLGQSVAGGLIVTVMIYATGHISGAHMNPAVTLSFACFRHFPWIQVPFYWAAQFTGAMCAAFVLKAVLQPI----------AVIGTTTPSGPHWHALAIEIVVTFNMMFVTCAVATDSRA-----VGELAGLAVGSAVCITSIFAGPVSGGSMNPARTLAPAVASN---VFTGLWIYFLGPVVGTLSGAWVYTYI 263          
BLAST of FC929217 vs. ExPASy Swiss-Prot
Match: NIP31_ARATH (Aquaporin NIP3-1 OS=Arabidopsis thaliana GN=NIP3-1 PE=2 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 4.693e-14
Identity = 65/236 (27.54%), Postives = 101/236 (42.80%), Query Frame = 1
Query:   76 LTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLG---AISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAF 774
            L   SF + LI EF+             +  ++   P         V + GIA  +G ++ V++Y    +SG H NPAV+     ++K    +   Y+ AQ LG   A + + LV        +  G          S       E I TF L++ + +    KR+         A + IG  + +  L + PI+G  +NPARSLG A+I+     + D WL+ V P IGA   A+
Sbjct:   36 LVSVSFVQKLIGEFVGTFTMIFAGCSAIVVNETYGKP---------VTLPGIALVWGLVVTVMIYSIGHVSGAHFNPAVSIAFASSKKFPFNQVPGYIAAQLLGSTLAAAVLRLVFHLDDDVCSLKGDVYVGTYPSNSNTTSFVMEFIATFNLMFVISAVATDKRATGS-----FAGIAIGATIVLDILFSGPISGASMNPARSLGPALIWG---CYKDLWLYIVSPVIGALSGAW 254          
The following BLAST results are available for this feature:
BLAST of FC929217 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 196
Match NameE-valueIdentityDescription
AQP8_NOTAL8.552e-1628.50Aquaporin-8 OS=Notomys alexis GN=AQP8 PE=2 SV=1[more]
AQP8_MOUSE1.459e-1528.19Aquaporin-8 OS=Mus musculus GN=Aqp8 PE=2 SV=1[more]
NIP11_ORYSJ2.488e-1530.85Aquaporin NIP1-1 OS=Oryza sativa subsp. japonica G... [more]
NIP11_MAIZE2.488e-1529.32Aquaporin NIP1-1 OS=Zea mays GN=NIP1-1 PE=2 SV=1[more]
GLPF_STRR61.235e-1432.83Glycerol uptake facilitator protein OS=Streptococc... [more]
NIP21_ORYSJ1.613e-1432.31Aquaporin NIP2-1 OS=Oryza sativa subsp. japonica G... [more]
NIP11_ARATH1.613e-1425.98Aquaporin NIP1-1 OS=Arabidopsis thaliana GN=NIP1-1... [more]
AQPM_ARCFU1.613e-1431.73Probable aquaporin aqpM OS=Archaeoglobus fulgidus ... [more]
NIP23_MAIZE3.593e-1429.15Aquaporin NIP2-3 OS=Zea mays GN=NIP2-3 PE=2 SV=1[more]
NIP31_ARATH4.693e-1427.54Aquaporin NIP3-1 OS=Arabidopsis thaliana GN=NIP3-1... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3DA09RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3DA09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929217 ID=FC929217; Name=FC929217; organism=Citrus clementina; type=EST; length=812bp
GGCACGAGGCACGGCTCATATTCAGCCAAGGACTACACGGACCCACCGCC
GGAGCCGCTATTCGACGCCGTGGAGCTGACCAAATGGTCATTCTACAGAG
CCTTGATAGCTGAGTTCATAGCAACCCTGCTCTTTCTTTACGTCACTGTC
TTGACTGTCATTGGCTACAAAAGCCAGACCGATCCCGCCAAGAACGTCGA
CGGCTGTGCCGGCGTCGGCATCCTCGGCATCGCCTGGGCCTTCGGTGGCA
TGATCTTTGTCCTCGTTTACTGCACCGCCGGTATCTCAGGTGGTCACATT
AACCCGGCAGTGACGTTCGGACTATTCTTGGCCCGCAAGGTGTCGTTGGT
CCGTGCTGTGATGTACATGGTGGCGCAGTGCCTTGGTGCTATCTCCGGTG
TTGGGTTGGTCAAGGCTTTCCAAAAATCTTACTACACAAGGTACGGAGGT
GGGGCCAACGAGCTGGCCGATGGGTACAGCACCGGCGTTGGATTGGCCGC
CGAGATCATCGGCACCTTTGTCTTGGTTTACACTGTCTTCTCGGCCACTG
ATCCCAAGAGAAGCGCCAGAGACTCCCACGTTCCCGTTTTGGCACCGCTC
CCCATTGGATTTGCTGTGTTCATGGTACACTTGGCCACAATCCCAATCAC
TGGCACTGGCATTAACCCAGCAAGGAGTCTCGGGGCCGCTGTTATTTACA
ACAAGGACAAGGCTTGGGATGATCAATGGCTCTTCTGGGTTGGACCCTTC
ATTGGTGCAGCAATTGCAGCTTTCTACCACCCATTCATCTTGAGAGCTGG
AGCTGTCAAGGC
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