FC929242

Overview
NameFC929242
Unique NameFC929242
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length602
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929242 vs. ExPASy Swiss-Prot
Match: C99A3_ORYSJ (Cytochrome P450 99A3 OS=Oryza sativa subsp. japonica GN=CYP99A3 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 5.885e-25
Identity = 55/120 (45.83%), Postives = 70/120 (58.33%), Query Frame = 2
Query:    2 EKCFIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLVAT 361
            E C I GY I   T V +N  A+ R  + WD  ++FIPERF     D  G  FE++PFG GRR C G   AM  +EL +A LLY FDW +P GM+  D+D E   G T  +K  L+LVA+
Sbjct:  374 ETCEIGGYEIVEGTRVLINSWAMARSPEYWDDAEKFIPERFEDGTADFKGSRFEYLPFGTGRRRCPGDIFAMATLELIVARLLYYFDWSLPDGMQPGDIDMELVVGATARRKNHLQLVAS 493          
BLAST of FC929242 vs. ExPASy Swiss-Prot
Match: C71A1_PERAE (Cytochrome P450 71A1 OS=Persea americana GN=CYP71A1 PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 7.686e-25
Identity = 50/87 (57.47%), Postives = 66/87 (75.86%), Query Frame = 2
Query:   14 IDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMP 274
            I GYHIPAKT VF+N  AIGRD + W+  +EF+PERFV +++D  GQ+F+ IPFGAGRR C G    +  VE++LANLLY F+W++P
Sbjct:  383 IRGYHIPAKTRVFINAWAIGRDPKSWENAEEFLPERFVNNSVDFKGQDFQLIPFGAGRRGCPGIAFGISSVEISLANLLYWFNWELP 469          
BLAST of FC929242 vs. ExPASy Swiss-Prot
Match: C76B1_HELTU (7-ethoxycoumarin O-deethylase OS=Helianthus tuberosus GN=CYP76B1 PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.004e-24
Identity = 58/114 (50.88%), Postives = 72/114 (63.16%), Query Frame = 2
Query:   14 IDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLV 355
            + GY IPA T VFVN  AIGRD  VWD   EF P+RF+ S +D+ G +F+ IPFGAGRRIC G P+A  +V + L +LL  FDWK+   +  D LD     G T  K KPL +V
Sbjct:  372 LSGYTIPAGTLVFVNAWAIGRDPTVWDDSLEFKPQRFLESRLDVRGHDFDLIPFGAGRRICPGIPLATRMVPIMLGSLLNNFDWKIDTKVPYDVLDMTEKNGTTISKAKPLCVV 485          
BLAST of FC929242 vs. ExPASy Swiss-Prot
Match: C71BT_ARATH (Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=CYP71B29 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.004e-24
Identity = 51/95 (53.68%), Postives = 66/95 (69.47%), Query Frame = 2
Query:   14 IDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDL 298
            I GY IPAKT + +NV AI RD ++W  PDEF P+RF+ S+ID  G NFE +PFG+GRRIC G  + + +VE AL NLLY FDW +P   + D +
Sbjct:  380 IQGYDIPAKTQIMINVYAIARDPKLWTNPDEFNPDRFLDSSIDYKGLNFELLPFGSGRRICPGMTMGITLVEFALLNLLYFFDWGLPEKEEADKI 474          
BLAST of FC929242 vs. ExPASy Swiss-Prot
Match: C80A1_BERST (Berbamunine synthase OS=Berberis stolonifera GN=CYP80A1 PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 2.921e-24
Identity = 54/118 (45.76%), Postives = 77/118 (65.25%), Query Frame = 2
Query:    2 EKCFIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLV 355
            E C + GY IP    V VN  AIGRD + W  P +F PERF+ S+I+  G+ F+FIPFG+GRRIC G P+A+ I+ L LA+L++ F W++P G+  + LD E    L+    KPL+++
Sbjct:  365 ETCQVMGYTIPKGMDVHVNAHAIGRDPKDWKDPLKFQPERFLDSDIEYNGKQFQFIPFGSGRRICPGRPLAVRIIPLVLASLVHAFGWELPDGVPNEKLDMEELFTLSLCMAKPLRVI 482          
BLAST of FC929242 vs. ExPASy Swiss-Prot
Match: C71C4_MAIZE (Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 2.921e-24
Identity = 52/122 (42.62%), Postives = 76/122 (62.30%), Query Frame = 2
Query:    2 EKCFIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERF----VGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLV 355
            + C + GY IPA T V VN  A+GR    W++ +EF+PERF    V   +D+    F+F+ FG+GRR+C G   A   +E  L+NL+Y+FDW++P GMK +D+D     G+T  +K+ L LV
Sbjct:  413 DACEVAGYTIPANTRVVVNAWALGRHSGYWERENEFVPERFLSGDVAGGVDLKPNEFQFLAFGSGRRMCPGVHSASATIEAMLSNLMYRFDWQLPAGMKAEDVDMTEVFGITVSRKEKLLLV 534          
BLAST of FC929242 vs. ExPASy Swiss-Prot
Match: C71C1_MAIZE (Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 2.921e-24
Identity = 58/122 (47.54%), Postives = 77/122 (63.11%), Query Frame = 2
Query:    8 CFIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFV----GSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKID--DLDFEATPGLTQHKKKPLKLV 355
            C I+GY IPA T V VN  A+ RD   WDK +EF PERF+     + +DM G++  F+PFGAGRRICAG+  A+  VE+ LANL+Y FDW+MP  M+     +D     G+T  + + L LV
Sbjct:  404 CEINGYTIPAGTRVIVNAWALARDPTCWDKAEEFFPERFLEQGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLANLIYHFDWEMPAEMERTGAKVDMSDQFGMTLRRTQKLYLV 525          
BLAST of FC929242 vs. ExPASy Swiss-Prot
Match: C98A3_ARATH (Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CYP98A3 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 3.815e-24
Identity = 50/116 (43.10%), Postives = 73/116 (62.93%), Query Frame = 2
Query:   14 IDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLVAT 361
            I GY IP  + V VNV A+ RD  VW  P EF PERF+  ++DM G +F  +PFGAGRR+C G+ + + +V   +++LL+ F W  P G K +++D    PGL  + + P++ VAT
Sbjct:  378 IGGYDIPKGSNVHVNVWAVARDPAVWKNPFEFRPERFLEEDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMMSHLLHHFVWTPPQGTKPEEIDMSENPGLVTYMRTPVQAVAT 493          
BLAST of FC929242 vs. ExPASy Swiss-Prot
Match: C71BS_ARATH (Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=CYP71B28 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 3.815e-24
Identity = 50/87 (57.47%), Postives = 62/87 (71.26%), Query Frame = 2
Query:   14 IDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMP 274
            I GY IPAKT + +N  AI RD ++W  PDEF P+RF+ S+ID  G NFE +PFG+GRRIC G  + + IVEL L NLLY FDW +P
Sbjct:  380 IQGYDIPAKTQIMINAYAIARDPKLWTNPDEFNPDRFLDSSIDYRGLNFELLPFGSGRRICPGMTMGIAIVELGLLNLLYFFDWGLP 466          
BLAST of FC929242 vs. ExPASy Swiss-Prot
Match: C71BF_ARATH (Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=CYP71B15 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 4.982e-24
Identity = 48/84 (57.14%), Postives = 64/84 (76.19%), Query Frame = 2
Query:   14 IDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDW 265
            I GY +PAKT + VNV A+GRD ++W+  DEF P+RF+ S++D  G+N+EFIPFG+GRRIC G  +   +VE+AL NLLY FDW
Sbjct:  380 IQGYDVPAKTQILVNVYAMGRDPKLWENADEFNPDRFLDSSVDFKGKNYEFIPFGSGRRICPGMTMGTILVEMALLNLLYFFDW 463          
The following BLAST results are available for this feature:
BLAST of FC929242 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
C99A3_ORYSJ5.885e-2545.83Cytochrome P450 99A3 OS=Oryza sativa subsp. japoni... [more]
C71A1_PERAE7.686e-2557.47Cytochrome P450 71A1 OS=Persea americana GN=CYP71A... [more]
C76B1_HELTU1.004e-2450.887-ethoxycoumarin O-deethylase OS=Helianthus tubero... [more]
C71BT_ARATH1.004e-2453.68Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=C... [more]
C80A1_BERST2.921e-2445.76Berbamunine synthase OS=Berberis stolonifera GN=CY... [more]
C71C4_MAIZE2.921e-2442.62Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 S... [more]
C71C1_MAIZE2.921e-2447.54Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 S... [more]
C98A3_ARATH3.815e-2443.10Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CY... [more]
C71BS_ARATH3.815e-2457.47Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=C... [more]
C71BF_ARATH4.982e-2457.14Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2AE02RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2AE02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929242 ID=FC929242; Name=FC929242; organism=Citrus clementina; type=EST; length=602bp
AGAAAAGTGCTTTATCGATGGTTATCACATACCAGCTAAGACAACGGTTT
TCGTTAATGTGCTGGCAATAGGAAGGGACGGCCAAGTTTGGGATAAACCC
GACGAATTTATTCCTGAGAGATTTGTGGGCTCTAATATTGATATGGGAGG
GCAAAACTTTGAATTTATTCCATTTGGTGCCGGTAGAAGAATTTGTGCAG
GATCACCTATAGCAATGCCGATTGTGGAGCTTGCACTTGCCAATCTTCTT
TACAAATTTGATTGGAAAATGCCTCATGGAATGAAGATTGATGACTTGGA
CTTTGAGGCTACGCCTGGTCTTACCCAGCACAAGAAAAAGCCTCTCAAGC
TCGTGGCAACCAAATCTATATGATGGTTTAGTCATTAGTGTCGTGATTTA
AAATAAGTTTGCATGCAAGCACTTTTCTTTACGGTTATTGTTTGTTCGAG
GATCATAATATGTAACGGTGAGGGGTGCTACCCAGCTCTCTTTTAAAGCC
AAAGCTCATAATGCTTTTCTAGCTAGATTGCTTTTGCTTTTTGTTTCTTT
TAGTGATTTAATAAAATTTTAGCCCAATTGAAATCAAAAAAAAAAAAAAA
AA
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