FC929242

Overview
NameFC929242
Unique NameFC929242
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length602
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929242 vs. ExPASy Swiss-Prot
Match: C93A2_SOYBN (Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 5.156e-21
Identity = 52/112 (46.43%), Postives = 71/112 (63.39%), Query Frame = 2
Query:   20 GYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVG---SNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPL 346
            GY IPAKT +FVNV AIGRD   W+ P EF PERF     S +D+ GQ++ FIPFG+GRR C G+ +A+ IV + LA ++  F WK  +G   + +D E   G+T  +  P+
Sbjct:  379 GYEIPAKTRLFVNVWAIGRDPNHWENPFEFRPERFFENGQSQLDVRGQHYHFIPFGSGRRSCPGTSLALQIVHVNLAIMIQCFQWKFDNGN--NKVDMEEKSGITLPRAHPI 488          
BLAST of FC929242 vs. ExPASy Swiss-Prot
Match: C71AE_ARATH (Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=CYP71A14 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.364e-20
Identity = 52/112 (46.43%), Postives = 67/112 (59.82%), Query Frame = 2
Query:   14 IDGYHIPAKTTVFVNVLAIGRDGQVWD-KPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPL 346
            + GY I A T V +N  AI RD   W    +EF PER + S +D  G NFEFIPFG+GRRIC G   AM +VE+ LANL+ +F+W+M      D+ D   + GL   +K PL
Sbjct:  379 LKGYDIAAGTQVIINAWAIQRDTMTWGIDAEEFRPERHLDSLVDFRGTNFEFIPFGSGRRICPGIGFAMALVEVTLANLVNRFNWRMEVQHSGDEYDLAESTGLDVCRKFPL 490          
BLAST of FC929242 vs. ExPASy Swiss-Prot
Match: C82A3_SOYBN (Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 5.700e-20
Identity = 50/120 (41.67%), Postives = 70/120 (58.33%), Query Frame = 2
Query:    2 EKCFIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSN--IDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLV 355
            E C + GYHI   T +  N+  I RD  VW  P EF PERF+ ++  +D+ G NFE +PFG+GRR+CAG  + + +V   LANLL+ FD   P    +D  +F    G T  K  PL+++
Sbjct:  398 ENCILGGYHIKKGTRLIHNLWKIHRDPSVWSDPLEFKPERFLTTHKDVDLRGHNFELLPFGSGRRVCAGMSLGLNMVHFTLANLLHSFDILNPSAEPVDMTEFF---GFTNTKATPLEIL 514          
BLAST of FC929242 vs. ExPASy Swiss-Prot
Match: C71AQ_ARATH (Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=CYP71A26 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 9.723e-20
Identity = 47/116 (40.52%), Postives = 70/116 (60.34%), Query Frame = 2
Query:   23 YHIPAKTTVFVNVLAIGRDGQVWDKP-DEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLVATKS 367
            +HIPA T V +N  AIGR+   W    +EF PER + S++D  GQ FE IPFG+GRRIC     A+ + E+ LANL+++FDW++      D  +   + G+  H+  PL  +A+ +
Sbjct:  373 HHIPAGTQVLINAWAIGREAATWGPDVEEFRPERHLDSSVDYRGQAFELIPFGSGRRICPAISFAVVLNEVVLANLVHRFDWRLSVESTEDQTEVAESTGIAIHRMFPLYAIASNT 488          
BLAST of FC929242 vs. ExPASy Swiss-Prot
Match: C71AO_ARATH (Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=CYP71A24 PE=2 SV=3)

HSP 1 Score: 95.9005 bits (237), Expect = 1.658e-19
Identity = 48/114 (42.11%), Postives = 66/114 (57.89%), Query Frame = 2
Query:   23 YHIPAKTTVFVNVLAIGRDGQVWDKP-DEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLVAT 361
            YHIPA T V +N  AIGR+   W    +EF PER + S +D  GQ+ E +PFGAGRRIC     A+ + E+ LANL+++FDW +P        D   + G+  H+  PL  + T
Sbjct:  375 YHIPAGTHVMINAWAIGREAATWGPDAEEFRPERHLNSYVDYRGQDTELVPFGAGRRICPAISFAVVLDEVVLANLVHQFDWTLPEESTEYQTDVAESTGMAVHRMFPLFAMTT 488          
BLAST of FC929242 vs. ExPASy Swiss-Prot
Match: C71AF_ARATH (Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=CYP71A15 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.695e-19
Identity = 50/112 (44.64%), Postives = 66/112 (58.93%), Query Frame = 2
Query:   14 IDGYHIPAKTTVFVNVLAIGRDGQVWD-KPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPL 346
            + GY I A T V  N  AI RD   W    +EF PER + S +D  G NFE+IPFG+GRRIC G   AM +VE+ LANL+ +F+W+M   +  D+ D     G+   +K PL
Sbjct:  378 LKGYDIAAGTQVITNAWAIQRDIVTWGIDAEEFRPERHLDSPLDFRGTNFEYIPFGSGRRICPGIGFAMALVEVTLANLVNRFNWRMDARLSGDEYDLAEATGIDVCRKFPL 489          
BLAST of FC929242 vs. ExPASy Swiss-Prot
Match: C93A3_SOYBN (Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 4.825e-19
Identity = 50/125 (40.00%), Postives = 74/125 (59.20%), Query Frame = 2
Query:    5 KCFIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFV---GSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLVATKSI 370
            +  + GY IPAKT +FVNV AIGRD   W+ P EF PERFV    S +D+ GQ++  +PFG+GRR C G+ +A+ +V + LA L+  F WK+        ++ E   G+T  +  P+  V  + +
Sbjct:  382 RAVVCGYDIPAKTRLFVNVWAIGRDPNHWENPLEFRPERFVENGKSQLDVRGQHYHLLPFGSGRRACPGTSLALQVVHVNLAVLIQCFQWKV--DCDNGKVNMEEKAGITLPRAHPIICVPIRRL 504          
BLAST of FC929242 vs. ExPASy Swiss-Prot
Match: C71AI_ARATH (Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=CYP71A18 PE=2 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 4.825e-19
Identity = 49/112 (43.75%), Postives = 67/112 (59.82%), Query Frame = 2
Query:   14 IDGYHIPAKTTVFVNVLAIGRDGQVWDKP-DEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPL 346
            + GY I A T V +N  +I RD  +W    +EF PER + S +D  GQ+ ++IPFG+GRRIC G  +AM +VE+ LANL+ +FDW +  G   D  D     GL   +K PL
Sbjct:  378 VKGYDIAAGTEVLINAWSIHRDPAIWGPDAEEFKPERHLDSTLDYHGQDLKYIPFGSGRRICPGINLAMGLVEVTLANLVGRFDWSVDPGPNGDQPDLAEDFGLDVCRKNPL 489          
BLAST of FC929242 vs. ExPASy Swiss-Prot
Match: C71AC_ARATH (Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=CYP71A12 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.834e-18
Identity = 48/112 (42.86%), Postives = 67/112 (59.82%), Query Frame = 2
Query:   14 IDGYHIPAKTTVFVNVLAIGRDGQVWDKP-DEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPL 346
            + GY+I A T V +N  AI RD  +W    +EF PER + S +D  G++  FIPFG+GRRIC G  +A+ +VE+ +ANL+ +FDW+   G   D  D     GL   +K PL
Sbjct:  378 VKGYNIAAGTEVIINAWAIQRDPAIWGPDAEEFKPERHLDSTLDYHGKDLNFIPFGSGRRICPGINLALGLVEVTVANLVGRFDWRAEAGPNGDQPDLTEAFGLDVCRKFPL 489          
BLAST of FC929242 vs. ExPASy Swiss-Prot
Match: C71AD_ARATH (Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=CYP71A13 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.395e-18
Identity = 46/112 (41.07%), Postives = 67/112 (59.82%), Query Frame = 2
Query:   14 IDGYHIPAKTTVFVNVLAIGRDGQVWDKP-DEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPL 346
            + GY+I A T V +N  AI RD  +W    +EF PER + S +D  G+N  +IPFG+GRRIC G  +A+ + E+ +ANL+ +FDW++  G   D  D     G+   +K PL
Sbjct:  378 VKGYNIAAGTEVIINAWAIQRDTAIWGPDAEEFKPERHLDSGLDYHGKNLNYIPFGSGRRICPGINLALGLAEVTVANLVGRFDWRVEAGPNGDQPDLTEAIGIDVCRKFPL 489          
The following BLAST results are available for this feature:
BLAST of FC929242 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
C93A2_SOYBN5.156e-2146.43Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=... [more]
C71AE_ARATH4.364e-2046.43Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=C... [more]
C82A3_SOYBN5.700e-2041.67Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=... [more]
C71AQ_ARATH9.723e-2040.52Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=C... [more]
C71AO_ARATH1.658e-1942.11Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=C... [more]
C71AF_ARATH3.695e-1944.64Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=C... [more]
C93A3_SOYBN4.825e-1940.00Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=... [more]
C71AI_ARATH4.825e-1943.75Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=C... [more]
C71AC_ARATH1.834e-1842.86Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=C... [more]
C71AD_ARATH2.395e-1841.07Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2AE02RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2AE02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929242 ID=FC929242; Name=FC929242; organism=Citrus clementina; type=EST; length=602bp
AGAAAAGTGCTTTATCGATGGTTATCACATACCAGCTAAGACAACGGTTT
TCGTTAATGTGCTGGCAATAGGAAGGGACGGCCAAGTTTGGGATAAACCC
GACGAATTTATTCCTGAGAGATTTGTGGGCTCTAATATTGATATGGGAGG
GCAAAACTTTGAATTTATTCCATTTGGTGCCGGTAGAAGAATTTGTGCAG
GATCACCTATAGCAATGCCGATTGTGGAGCTTGCACTTGCCAATCTTCTT
TACAAATTTGATTGGAAAATGCCTCATGGAATGAAGATTGATGACTTGGA
CTTTGAGGCTACGCCTGGTCTTACCCAGCACAAGAAAAAGCCTCTCAAGC
TCGTGGCAACCAAATCTATATGATGGTTTAGTCATTAGTGTCGTGATTTA
AAATAAGTTTGCATGCAAGCACTTTTCTTTACGGTTATTGTTTGTTCGAG
GATCATAATATGTAACGGTGAGGGGTGCTACCCAGCTCTCTTTTAAAGCC
AAAGCTCATAATGCTTTTCTAGCTAGATTGCTTTTGCTTTTTGTTTCTTT
TAGTGATTTAATAAAATTTTAGCCCAATTGAAATCAAAAAAAAAAAAAAA
AA
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