FC929321

Overview
NameFC929321
Unique NameFC929321
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length823
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929321 vs. ExPASy Swiss-Prot
Match: CYP3_CAEEL (Peptidyl-prolyl cis-trans isomerase 3 OS=Caenorhabditis elegans GN=cyn-3 PE=1 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 4.717e-62
Identity = 112/158 (70.89%), Postives = 126/158 (79.75%), Query Frame = 3
Query:  348 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGK 821
            M   KVFFD+T+GG+ +GRIVMEL+ DV P+TA NFRALCTGE GIGKSGKPLH+KGS FHR+IP FM Q            ESIYG  F DENF +KHTGPG+LSMANAGP TNGSQFF+CT KTEWLDGKHVVFG+VVEG+DVVKA+E  GS SGK
Sbjct:    1 MSRSKVFFDITIGGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRIIPNFMIQGGDFTRGNGTGGESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLDGKHVVFGRVVEGLDVVKAVESNGSQSGK 158          
BLAST of FC929321 vs. ExPASy Swiss-Prot
Match: CYP7_CAEEL (Peptidyl-prolyl cis-trans isomerase 7 OS=Caenorhabditis elegans GN=cyn-7 PE=1 SV=2)

HSP 1 Score: 235.728 bits (600), Expect = 2.341e-61
Identity = 108/157 (68.79%), Postives = 125/157 (79.62%), Query Frame = 3
Query:  348 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSG 818
            M  P+VFFD+T+ G+P GRIVMEL+ D+ P+TAENFRALCTGEKG+GKSGKPLH+KGS FHR+IP FM Q            ESIYG  F DENF +KHTGPG+LSMANAGP TNGSQFF+CT KT WLDGKHVVFG+VVEG+D+V  +E  GSSSG
Sbjct:    1 MSRPRVFFDITIAGKPTGRIVMELYNDIVPKTAENFRALCTGEKGVGKSGKPLHFKGSKFHRIIPEFMIQGGDFTRGNGTGGESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTAWLDGKHVVFGRVVEGLDIVSKVEGNGSSSG 157          
BLAST of FC929321 vs. ExPASy Swiss-Prot
Match: PPIA_DICDI (Peptidyl-prolyl cis-trans isomerase A OS=Dictyostelium discoideum GN=ppiA PE=1 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 8.327e-59
Identity = 109/156 (69.87%), Postives = 121/156 (77.56%), Query Frame = 3
Query:  354 NPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGK 821
            NP+VFFD+T+GG  AG++VMEL+A+  P+TAENFRALCTGEKGIGKSGKPL YKGSSFHRVI  FMCQ            ESIYG+ FADENF  KH G G LSMANAG  TNGSQFF+C A T+WLDGKHVVFG V EGMDVVK +E  GS SGK
Sbjct:   11 NPRVFFDITIGGVEAGKVVMELYANTVPKTAENFRALCTGEKGIGKSGKPLSYKGSSFHRVITNFMCQGGDFTMGNGTGGESIYGNKFADENFKLKHFGQGTLSMANAGANTNGSQFFICVAPTDWLDGKHVVFGFVTEGMDVVKKMEAAGSQSGK 166          
BLAST of FC929321 vs. ExPASy Swiss-Prot
Match: CYP2_CAEEL (Peptidyl-prolyl cis-trans isomerase 2 OS=Caenorhabditis elegans GN=cyn-2 PE=2 SV=2)

HSP 1 Score: 226.868 bits (577), Expect = 1.088e-58
Identity = 107/157 (68.15%), Postives = 121/157 (77.07%), Query Frame = 3
Query:  348 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSG 818
            MP  KVFFD+T+GG+  GRIVMEL+ D+ P+TAENFRALCTGEKG GKSGK LH+KGS FHR+IP FM Q            ESI+G  F DENF +KHTGPG+LSMAN G  TNGSQFF+CT KT WLDGKHVVFG+V+EGMDVVKAIE  GS  G
Sbjct:    1 MPRVKVFFDITIGGKKGGRIVMELYNDIVPKTAENFRALCTGEKGKGKSGKKLHFKGSKFHRIIPEFMIQGGDFTEGNGTGGESIHGEKFDDENFKEKHTGPGVLSMANCGANTNGSQFFLCTVKTTWLDGKHVVFGKVIEGMDVVKAIESKGSEDG 157          
BLAST of FC929321 vs. ExPASy Swiss-Prot
Match: CYPH_ALLCE (Peptidyl-prolyl cis-trans isomerase OS=Allium cepa GN=CYP PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.570e-57
Identity = 107/137 (78.10%), Postives = 115/137 (83.94%), Query Frame = 3
Query:  411 MELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGK 821
            MELF DV P+TAENFRALCTGEKG+G   KPLHYKGSSFHRVIPGFMCQ            ESIYG+ F DENF+KKHTGPG+LSMANAGPGTNGSQFF+CT KT WLDGKHVVFGQVVEGMDVV+AIEKVGS SG+
Sbjct:    1 MELFQDVVPQTAENFRALCTGEKGMGDR-KPLHYKGSSFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFKDENFIKKHTGPGVLSMANAGPGTNGSQFFICTEKTAWLDGKHVVFGQVVEGMDVVRAIEKVGSQSGQ 136          
BLAST of FC929321 vs. ExPASy Swiss-Prot
Match: CYP1_CAEEL (Peptidyl-prolyl cis-trans isomerase 1 OS=Caenorhabditis elegans GN=cyn-1 PE=2 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 4.569e-57
Identity = 104/154 (67.53%), Postives = 118/154 (76.62%), Query Frame = 3
Query:  357 PKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSG 818
            PKVFFD+++G +PAGR+ MELF DV P+TAENFRALCTGEKG+G+ G  LH+KGS FHR+IP FM Q            ESIYG+ F DENF  KHTGPG LSMANAGP TNGSQFF+CT  T WLDG HVVFGQV +GM VVK IEK+GS SG
Sbjct:   22 PKVFFDVSIGEEPAGRVTMELFNDVVPKTAENFRALCTGEKGVGEQGVALHFKGSKFHRIIPEFMIQGGDFTRHNGTGGESIYGNKFKDENFDLKHTGPGCLSMANAGPNTNGSQFFICTVDTPWLDGGHVVFGQVTDGMSVVKKIEKMGSRSG 175          
BLAST of FC929321 vs. ExPASy Swiss-Prot
Match: PPIA_RAT (Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus GN=Ppia PE=1 SV=2)

HSP 1 Score: 218.779 bits (556), Expect = 2.962e-56
Identity = 105/158 (66.46%), Postives = 119/158 (75.32%), Query Frame = 3
Query:  348 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGK 821
            M NP VFFD+T  G+P GR+  ELFAD  P+TAENFRAL TGEKG G       YKGSSFHR+IPGFMCQ            +SIYG  F DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM +V+A+E+ GS +GK
Sbjct:    1 MVNPTVFFDITADGEPLGRVCFELFADKVPKTAENFRALSTGEKGFG-------YKGSSFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMSIVEAMERFGSRNGK 151          
BLAST of FC929321 vs. ExPASy Swiss-Prot
Match: PPIA_CRIGR (Peptidyl-prolyl cis-trans isomerase A OS=Cricetulus griseus GN=PPIA PE=2 SV=2)

HSP 1 Score: 216.853 bits (551), Expect = 1.125e-55
Identity = 104/158 (65.82%), Postives = 119/158 (75.32%), Query Frame = 3
Query:  348 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGK 821
            M NP VFFD++  G+P GR+  ELFAD  P+TAENFRAL TGEKG G       YKGSSFHR+IPGFMCQ             SIYG  F DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +GK
Sbjct:    1 MVNPTVFFDISADGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSSFHRIIPGFMCQGGDFTRHNGTGGRSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGK 151          
BLAST of FC929321 vs. ExPASy Swiss-Prot
Match: PPIA_PONPY (Peptidyl-prolyl cis-trans isomerase A OS=Pongo pygmaeus GN=PPIA PE=2 SV=4)

HSP 1 Score: 216.468 bits (550), Expect = 1.470e-55
Identity = 104/158 (65.82%), Postives = 119/158 (75.32%), Query Frame = 3
Query:  348 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGK 821
            M NP VFFD+ V G+P GR+  ELFAD  P+TAENFRAL TGEKG G       YKGS FHR+IPGFMCQ            +SIYG  F DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +GK
Sbjct:    1 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGK 151          
BLAST of FC929321 vs. ExPASy Swiss-Prot
Match: PPIA_PAPAN (Peptidyl-prolyl cis-trans isomerase A OS=Papio anubis GN=PPIA PE=2 SV=2)

HSP 1 Score: 216.468 bits (550), Expect = 1.470e-55
Identity = 104/158 (65.82%), Postives = 119/158 (75.32%), Query Frame = 3
Query:  348 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGK 821
            M NP VFFD+ V G+P GR+  ELFAD  P+TAENFRAL TGEKG G       YKGS FHR+IPGFMCQ            +SIYG  F DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +GK
Sbjct:    1 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGK 151          
The following BLAST results are available for this feature:
BLAST of FC929321 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 232
Match NameE-valueIdentityDescription
CYP3_CAEEL4.717e-6270.89Peptidyl-prolyl cis-trans isomerase 3 OS=Caenorhab... [more]
CYP7_CAEEL2.341e-6168.79Peptidyl-prolyl cis-trans isomerase 7 OS=Caenorhab... [more]
PPIA_DICDI8.327e-5969.87Peptidyl-prolyl cis-trans isomerase A OS=Dictyoste... [more]
CYP2_CAEEL1.088e-5868.15Peptidyl-prolyl cis-trans isomerase 2 OS=Caenorhab... [more]
CYPH_ALLCE1.570e-5778.10Peptidyl-prolyl cis-trans isomerase OS=Allium cepa... [more]
CYP1_CAEEL4.569e-5767.53Peptidyl-prolyl cis-trans isomerase 1 OS=Caenorhab... [more]
PPIA_RAT2.962e-5666.46Peptidyl-prolyl cis-trans isomerase A OS=Rattus no... [more]
PPIA_CRIGR1.125e-5565.82Peptidyl-prolyl cis-trans isomerase A OS=Cricetulu... [more]
PPIA_PONPY1.470e-5565.82Peptidyl-prolyl cis-trans isomerase A OS=Pongo pyg... [more]
PPIA_PAPAN1.470e-5565.82Peptidyl-prolyl cis-trans isomerase A OS=Papio anu... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3DG01RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3DG01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929321 ID=FC929321; Name=FC929321; organism=Citrus clementina; type=EST; length=823bp
GGCACGAGGTTGCTGGCGACGGCAAGGAGAATGGCCTCATTAGCAACCAC
TTCAGAGTCCAGGCGGTACTGCTGGCCTAACATGTAATGCCCCACGTAGT
CTGCACATTTTTCGGGAACAGTCGCCCATCCTATAACGTTATTAGTTTCC
ACTCCGAGTCGCCAACTCAGGCAGGACAAGCCGGGCACATCGTTGTTCCG
GGAACCGGCTTTCGGTCGGAGAAGATGAATCTGATGGGGGATGTCCATGC
TAAATCCATGGGATGTTGCTGCCTCGTGCCGAATTCGGCACGAGGATCAG
AAGTCCGTGTTTAGTTTGTTTTTTTCTCTCCAATCAACCAATCAAAAATG
CCAAACCCCAAAGTGTTCTTCGACATGACCGTCGGCGGTCAGCCCGCCGG
CAGGATCGTGATGGAGCTCTTCGCCGATGTCACCCCCCGAACCGCCGAGA
ACTTCCGCGCCCTCTGCACCGGCGAGAAAGGCATCGGCAAGTCCGGCAAG
CCACTCCACTACAAGGGCTCGTCCTTCCACCGTGTGATCCCCGGATTCAT
GTGCCAGGGGGGAGACTTCACCGCCGGAAACGGAACCGGAGGCGAATCAA
TCTACGGCTCANAATTCGCCGATGAGAACTTCGTGAAGAAGCACACCGGC
CCCGGAATCCTCTCCATGGCGAATGCCGGACCCGGAACCAACGGATCTCA
GTTCTTCGTCTGTACGGCCAAGACCGAGTGGCTCGATGGGAAGCACGTTG
TGTTCGGTCAAGTCGTCGAAGGAATGGACGTCGTCAAGGCCATCGAGAAA
GTGGGGTCAAGCTCCGGAAAGGA
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