FC929455

Overview
NameFC929455
Unique NameFC929455
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length872
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929455 vs. ExPASy Swiss-Prot
Match: CRK36_ARATH (Cysteine-rich receptor-like protein kinase 36 OS=Arabidopsis thaliana GN=CRK36 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.163e-29
Identity = 72/158 (45.57%), Postives = 99/158 (62.66%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKEK--LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDF 870
            F L  +  ATN FS EN +G+GG+  VYKG L +GQ +A+KRL  G+    + +F +E+ ++  + H N  KLLG+  EG   I V E  PN SL   ++   ++  L W +RY+I  GVA GLLYLHE  Q RIIHRD+KA+NILL  +  P++ DF
Sbjct:  328 FDLGMILIATNEFSLENKLGQGGFGSVYKGILPSGQEIAVKRLAGGSGQGEL-EFKNEVLLLTRLQHRNLVKLLGFCNEGNEEILVYEHVPNSSLDHFIFDEDKRWLLTWDVRYRIIEGVARGLLYLHEDSQLRIIHRDLKASNILLDAEMNPKVADF 484          
BLAST of FC929455 vs. ExPASy Swiss-Prot
Match: RKF3_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RKF3 OS=Arabidopsis thaliana GN=RKF3 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.384e-29
Identity = 76/162 (46.91%), Postives = 101/162 (62.35%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGY-----GIEGGMHIVL-ELSPNGSLASLLYG-MKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDF 870
            FS  E++ ATNNFS  N+IG+GGY  V+KG L +G  VA KR    +A    A+F  E+ ++A + H N   L GY       EG   I++ +L  NGSL   L+G ++ +L W +R +IALG+A GL YLH G Q  IIHRDIKA+NILL E FE ++ DF
Sbjct:  271 FSFDEIKKATNNFSRHNIIGRGGYGNVFKGALPDGTQVAFKRFKNCSAGGD-ANFAHEVEVIASIRHVNLLALRGYCTATTPYEGHQRIIVCDLVSNGSLHDHLFGDLEAQLAWPLRQRIALGMARGLAYLHYGAQPSIIHRDIKASNILLDERFEAKVADF 431          
BLAST of FC929455 vs. ExPASy Swiss-Prot
Match: CRK3_ARATH (Cysteine-rich receptor-like protein kinase 3 OS=Arabidopsis thaliana GN=CRK3 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.384e-29
Identity = 75/158 (47.47%), Postives = 97/158 (61.39%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKE--KLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDF 870
            FS   L+ AT+ FS +N +G+GG   VYKG L NG+ VA+KRL   T  + +  F +E+ +++ VDH N  KLLG  I G   + V E   N SL   L+  K+   L W  R+KI LG AEG+ YLHE    RIIHRDIK +NILL +DF P+I DF
Sbjct:  311 FSYENLERATDYFSDKNKLGQGGSGSVYKGVLTNGKTVAVKRLFFNTK-QWVDHFFNEVNLISQVDHKNLVKLLGCSITGPESLLVYEYIANQSLHDYLFVRKDVQPLNWAKRFKIILGTAEGMAYLHEESNLRIIHRDIKLSNILLEDDFTPRIADF 467          
BLAST of FC929455 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 4.420e-29
Identity = 74/158 (46.84%), Postives = 98/158 (62.03%), Query Frame = 1
Query:  403 IFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLYGMKE-KLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDF 870
            IF+  EL+SAT +F   N +G+GG+  VYKG L +G++VA+K L+ G+       F++E+  ++ V H N  KL G   EG    +V E  PNGSL   L+G K   L W  RY+I LGVA GL+YLHE    RI+HRD+KA+NILL     PQI DF
Sbjct:  681 IFTYSELKSATQDFDPSNKLGEGGFGPVYKGNLNDGRVVAVKLLSVGSRQGK-GQFVAEIVAISSVLHRNLVKLYGCCFEGEHRMLVYEYLPNGSLDQALFGDKTLHLDWSTRYEICLGVARGLVYLHEEASVRIVHRDVKASNILLDSRLVPQISDF 837          
BLAST of FC929455 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.773e-29
Identity = 76/193 (39.38%), Postives = 116/193 (60.10%), Query Frame = 1
Query:  304 LKLSIRRSSSMREGIDMPRNLFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGG-MHIVLELSPNGSLASLLYGMKEK---LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDF 870
            L L I R +    G ++  N  +   D Q+    F+L +++ ATNNF  EN IG+GG+  VYKG L +G  +A+K+L+   + +   +F++E+G+++ + HPN  KL G  IEG  + +V E   N SLA  L+G +++   L W  R KI +G+A+GL YLHE  + +I+HRDIKA N+LL      +I DF
Sbjct:  625 LVLVILRLTGYLGGKEVDENEELRGLDLQTGS--FTLKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMTIAVKQLS-SKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKICIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDF 814          
BLAST of FC929455 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 7.540e-29
Identity = 75/193 (38.86%), Postives = 116/193 (60.10%), Query Frame = 1
Query:  304 LKLSIRRSSSMREGIDMPRNLFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGG-MHIVLELSPNGSLASLLYGMKEK---LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDF 870
            L L I R +    G ++  N  +   D Q+    F+L +++ ATNNF  EN IG+GG+  VYKG L +G  +A+K+L+   + +   +F++E+G+++ + HPN  KL G  IEG  + +V E   N SLA  L+G +++   L W  R K+ +G+A+GL YLHE  + +I+HRDIKA N+LL      +I DF
Sbjct:  623 LVLVILRLTGYLGGKEVDENEELRGLDLQTGS--FTLKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMTIAVKQLS-SKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKVCIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDF 812          
BLAST of FC929455 vs. ExPASy Swiss-Prot
Match: CRK8_ARATH (Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana GN=CRK8 PE=2 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 7.540e-29
Identity = 69/153 (45.10%), Postives = 100/153 (65.36%), Query Frame = 1
Query:  421 LQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYG--MKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDF 870
            +Q+ATN+F+  N IG+GG+ EVYKG   NG+ VA+KRL++ +     A+F +E+ ++A + H N  +LLG+ ++G   I V E  PN SL  LL+    + +L W  RY I  G+A G+LYLH+  +  IIHRD+KA+NILL  D  P+I DF
Sbjct:  346 IQTATNDFAESNKIGRGGFGEVYKGTFSNGKEVAVKRLSKNSRQGE-AEFKTEVVVVAKLQHRNLVRLLGFSLQGEERILVYEYMPNKSLDCLLFDPTKQTQLDWMQRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADINPKIADF 497          
BLAST of FC929455 vs. ExPASy Swiss-Prot
Match: CRK6_ARATH (Cysteine-rich receptor-like protein kinase 6 OS=Arabidopsis thaliana GN=CRK6 PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 9.847e-29
Identity = 68/153 (44.44%), Postives = 101/153 (66.01%), Query Frame = 1
Query:  421 LQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKEKLK--WGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDF 870
            +Q+ATN+F+  N IG+GG+ EVYKG   NG+ VA+KRL++ +     A+F +E+ ++A + H N  +LLG+ ++G   I V E  PN SL  LL+   ++++  W  RY I  G+A G+LYLH+  +  IIHRD+KA+NILL  D  P+I DF
Sbjct:  344 IQTATNDFAESNKIGRGGFGEVYKGTFSNGKEVAVKRLSKNSRQGE-AEFKTEVVVVAKLQHRNLVRLLGFSLQGEERILVYEYMPNKSLDCLLFDPTKQIQLDWMQRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADINPKIADF 495          
BLAST of FC929455 vs. ExPASy Swiss-Prot
Match: CRK32_ARATH (Putative cysteine-rich receptor-like protein kinase 32 OS=Arabidopsis thaliana GN=CRK32 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 9.847e-29
Identity = 77/175 (44.00%), Postives = 101/175 (57.71%), Query Frame = 1
Query:  382 DSQSPQKI-FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKEK----------LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDF 870
            D  SPQ + F    L++AT+ FS  N +GKGG+ EVYKG L N   VA+KRL+  +      +F +E+ I+A + H N  +LLG+ +E    I V E  PN SL   L+G K+K          L W  RY I  G+  GLLYLH+  +  IIHRDIKA+NILL  D  P+I DF
Sbjct:  300 DMTSPQSLQFDFMTLEAATDKFSRNNKLGKGGFGEVYKGMLPNETEVAVKRLSSNSGQGT-QEFKNEVVIVAKLQHKNLVRLLGFCLERDEQILVYEFVPNKSLNYFLFGNKQKHLLDPTKKSQLDWKRRYNIIGGITRGLLYLHQDSRLTIIHRDIKASNILLDADMNPKIADF 473          
BLAST of FC929455 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.286e-28
Identity = 76/164 (46.34%), Postives = 99/164 (60.37%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIA---DFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLL---YGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDF 870
            K FS  E+Q+AT+NFS +N++G+GG+  VYKG L NG +VA+KRL     D I      F +E+ ++    H N  +L G+ +      +V    PNGS+A  L   YG K  L W  R  IALG A GL+YLHE C  +IIHRD+KAANILL E FE  + DF
Sbjct:  286 KRFSFREIQTATSNFSPKNILGQGGFGMVYKGYLPNGTVVAVKRLK----DPIYTGEVQFQTEVEMIGLAVHRNLLRLFGFCMTPEERMLVYPYMPNGSVADRLRDNYGEKPSLDWNRRISIALGAARGLVYLHEQCNPKIIHRDVKAANILLDESFEAIVGDF 445          
The following BLAST results are available for this feature:
BLAST of FC929455 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 390
Match NameE-valueIdentityDescription
CRK36_ARATH1.163e-2945.57Cysteine-rich receptor-like protein kinase 36 OS=A... [more]
RKF3_ARATH3.384e-2946.91Probable LRR receptor-like serine/threonine-protei... [more]
CRK3_ARATH3.384e-2947.47Cysteine-rich receptor-like protein kinase 3 OS=Ar... [more]
Y1561_ARATH4.420e-2946.84Probable LRR receptor-like serine/threonine-protei... [more]
Y5343_ARATH5.773e-2939.38Probable LRR receptor-like serine/threonine-protei... [more]
Y5344_ARATH7.540e-2938.86Probable LRR receptor-like serine/threonine-protei... [more]
CRK8_ARATH7.540e-2945.10Cysteine-rich receptor-like protein kinase 8 OS=Ar... [more]
CRK6_ARATH9.847e-2944.44Cysteine-rich receptor-like protein kinase 6 OS=Ar... [more]
CRK32_ARATH9.847e-2944.00Putative cysteine-rich receptor-like protein kinas... [more]
Y5457_ARATH1.286e-2846.34Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2CC11RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2CC11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929455 ID=FC929455; Name=FC929455; organism=Citrus clementina; type=EST; length=872bp
ATTTTAGTTTCTTTTTTGACTGAGATAAGAGGACGGGACAAAGAAACAGA
ATTTAGAATGCTCTGTTCTCATCCCCTGTTTCTGGTCCAGATTTTATAAT
ATCTGGACATGGAGAAGAAGGAAGATTCATGCTCGCCGGTTGGGGTTCTT
GAGGACTATTTTCGAAGCGAAGACTCCGAAACATGTTCTTCAAAAGAACC
ATGCTCTGAAACTAAGCCGGAATCCAAATCCAATTCTCGCTGGCATTTAT
TCTACGACTTATTCAGAAACAAATCGAAGAAATCATTAGTCACATTGTAT
CCCCTCAAGCTTTCAATAAGAAGAAGCAGTAGTATGAGAGAGGGCATTGA
TATGCCGAGGAATCTTTTTGTAAATTCCTACGATTCACAGTCTCCCCAGA
AGATTTTCTCCCTCTATGAGCTGCAATCCGCCACCAACAATTTCAGCTTC
GAAAATTTGATTGGAAAGGGAGGTTATGCTGAAGTTTACAAAGGGCGTTT
GAGAAATGGGCAGCTTGTGGCAATCAAACGGCTAACAAGAGGTACAGCAG
ATGAGATTATAGCGGACTTTTTATCGGAGCTTGGGATTATGGCTCATGTC
GATCATCCTAATACTGCTAAGTTATTAGGATATGGGATTGAAGGAGGCAT
GCACATTGTTCTTGAATTGTCTCCTAATGGAAGCTTAGCTTCTCTCCTTT
ATGGTATGAAGGAGAAACTGAAATGGGGTATCAGGTATAAGATTGCGTTA
GGGGTAGCCGAAGGCTTACTTTATCTTCATGAGGGCTGTCAGAGGAGAAT
CATTCATAGAGATATTAAAGCTGCCAATATTTTGCTCACTGAGGACTTCG
AGCCTCAGATTTGTGATTTTGG
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