FC929455

Overview
NameFC929455
Unique NameFC929455
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length872
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929455 vs. ExPASy Swiss-Prot
Match: CRK15_ARATH (Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana GN=CRK15 PE=2 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 1.286e-28
Identity = 68/153 (44.44%), Postives = 97/153 (63.40%), Query Frame = 1
Query:  421 LQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLY--GMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDF 870
            +++ATN FS  N IG+GG+ EVYKG   NG  VA+KRL++ +      +F +E+ ++A + H N  +LLG+ I GG  I V E  PN SL   L+    + +L W  RYK+  G+A G+LYLH+  +  IIHRD+KA+NILL  D  P++ DF
Sbjct:  330 IRAATNKFSENNKIGQGGFGEVYKGTFSNGTEVAVKRLSKSSGQGD-TEFKNEVVVVAKLQHRNLVRLLGFSIGGGERILVYEYMPNKSLDYFLFDPAKQNQLDWTRRYKVIGGIARGILYLHQDSRLTIIHRDLKASNILLDADMNPKLADF 481          
BLAST of FC929455 vs. ExPASy Swiss-Prot
Match: BRL1_ARATH (Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.286e-28
Identity = 73/181 (40.33%), Postives = 103/181 (56.91%), Query Frame = 1
Query:  352 MPRNLFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTR--GTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKEK-----LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDF 870
            +P  L +N    + P +  +   L  ATN FS E ++G GG+ EVYK +LR+G +VAIK+L R  G  D    +F++E+  +  + H N   LLGY   G   + V E    GSL ++L+    K     L W  R KIA+G A GL +LH  C   IIHRD+K++N+LL EDFE ++ DF
Sbjct:  829 VPEPLSINVATFEKPLRKLTFAHLLEATNGFSAETMVGSGGFGEVYKAQLRDGSVVAIKKLIRITGQGDR---EFMAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKWGSLETVLHEKSSKKGGIYLNWAARKKIAIGAARGLAFLHHSCIPHIIHRDMKSSNVLLDEDFEARVSDF 1006          
BLAST of FC929455 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.680e-28
Identity = 71/157 (45.22%), Postives = 98/157 (62.42%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKE-KLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDF 870
            F+  EL+SAT +F   N +G+GG+  VYKG+L +G+ VA+K L+ G+       F++E+  ++ V H N  KL G   EG   + V E  PNGSL   L+G K   L W  RY+I LGVA GL+YLHE  + RI+HRD+KA+NILL     P++ DF
Sbjct:  681 FTYSELKSATQDFDPSNKLGEGGFGPVYKGKLNDGREVAVKLLSVGSRQGK-GQFVAEIVAISAVQHRNLVKLYGCCYEGEHRLLVYEYLPNGSLDQALFGEKTLHLDWSTRYEICLGVARGLVYLHEEARLRIVHRDVKASNILLDSKLVPKVSDF 836          
BLAST of FC929455 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.194e-28
Identity = 67/160 (41.88%), Postives = 103/160 (64.38%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKE----KLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDF 870
            F+L ++++AT+NF     IG+GG+  VYKG L  G+L+A+K+L+   + +   +F++E+G+++ + HPN  KL G  +EG   I V E   N  L+  L+G  E    KL W  R KI LG+A+GL +LHE  + +I+HRDIKA+N+LL +D   +I DF
Sbjct:  666 FTLRQIKAATDNFDVTRKIGEGGFGSVYKGELSEGKLIAVKQLS-AKSRQGNREFVNEIGMISALQHPNLVKLYGCCVEGNQLILVYEYLENNCLSRALFGKDESSRLKLDWSTRKKIFLGIAKGLTFLHEESRIKIVHRDIKASNVLLDKDLNAKISDF 824          
BLAST of FC929455 vs. ExPASy Swiss-Prot
Match: CRK35_ARATH (Putative cysteine-rich receptor-like protein kinase 35 OS=Arabidopsis thaliana GN=CRK35 PE=3 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 2.194e-28
Identity = 76/198 (38.38%), Postives = 116/198 (58.59%), Query Frame = 1
Query:  286 LVTLYPLKLSIRRSSSMREGIDMPRNLFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLY--GMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDF 870
            LV+L  L +  RR  S +       +    ++  Q     FS   +++AT+ FS  N+IG+GG+ EVY+G+L +G  VA+KRL++ T+ +   +F +E  +++ + H N  +LLG+ +EG   I V E  PN SL   L+    + +L W  RY I  G+A G+LYLH+  +  IIHRD+KA+NILL  D  P+I DF
Sbjct:  298 LVSLVVLLVVCRRKKSYKTTEVQATDEITTTHSLQ-----FSFKTIEAATDKFSDSNMIGRGGFGEVYRGKLSSGPEVAVKRLSK-TSGQGAEEFKNEAVLVSKLQHKNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLFDPAKQGELDWTRRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADF 489          
BLAST of FC929455 vs. ExPASy Swiss-Prot
Match: CRK17_ARATH (Cysteine-rich receptor-like protein kinase 17 OS=Arabidopsis thaliana GN=CRK17 PE=2 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 2.194e-28
Identity = 73/197 (37.06%), Postives = 117/197 (59.39%), Query Frame = 1
Query:  289 VTLYPLKLSIRRSSSMREGIDMPRNLFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLY--GMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDF 870
            + L  + L I +    ++ I++P  + +N  +S      F L  +++AT NFS  N +G GG+ EVYKG L NG  +A+KRL++ T+ +   +F +E+ ++A + H N  +LLG+ ++G   + V E  PN SL   L+    + +L W +R  I  G+  G+LYLH+  + +IIHRD+KA+NILL  D  P+I DF
Sbjct:  314 IILIVVGLVICKRRKQKQEIELP--IVLNEAESVQ----FDLKTIEAATGNFSEHNKLGAGGFGEVYKGMLLNGTEIAVKRLSK-TSGQGEIEFKNEVVVVAKLQHINLVRLLGFSLQGEEKLLVYEFVPNKSLDYFLFDPNKRNQLDWTVRRNIIGGITRGILYLHQDSRLKIIHRDLKASNILLDADMNPKIADF 503          
BLAST of FC929455 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.865e-28
Identity = 73/159 (45.91%), Postives = 94/159 (59.12%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGI-EGGMHIVLELSPNGSLASLLYGMK-EKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDF 870
            K F+  EL   TNNFS  N +G GGY +VYKG L NGQ++AIKR  +G+      +F +E+ +++ V H N  KLLG+   +    +V E  PNGSL   L G    KL W  R KIALG  +GL YLHE     IIHRD+K+ NILL E    ++ DF
Sbjct:  620 KAFTFEELSKCTNNFSDANDVGGGGYGQVYKGTLPNGQVIAIKRAQQGSMQGAF-EFKTEIELLSRVHHKNVVKLLGFCFDQKEQMLVYEYIPNGSLRDGLSGKNGVKLDWTRRLKIALGSGKGLAYLHELADPPIIHRDVKSNNILLDEHLTAKVADF 777          
BLAST of FC929455 vs. ExPASy Swiss-Prot
Match: CRK29_ARATH (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.865e-28
Identity = 66/153 (43.14%), Postives = 102/153 (66.67%), Query Frame = 1
Query:  421 LQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKEK--LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDF 870
            L++AT+NFS EN +G+GG+  VYKG    GQ +A+KRL+ G + +   +F +E+ ++A + H N  +L+G+ I+G   + V E   N SL   ++  +++  L W +RYK+  G+A GLLYLHE  + RIIHRD+KA+NILL ++  P+I DF
Sbjct:  350 LKTATDNFSSENELGRGGFGSVYKGVFPQGQEIAVKRLS-GNSGQGDNEFKNEILLLAKLQHRNLVRLIGFCIQGEERLLVYEFIKNASLDQFIFDTEKRQLLDWVVRYKMIGGIARGLLYLHEDSRFRIIHRDLKASNILLDQEMNPKIADF 501          
BLAST of FC929455 vs. ExPASy Swiss-Prot
Match: CRK23_ARATH (Putative cysteine-rich receptor-like protein kinase 23 OS=Arabidopsis thaliana GN=CRK23 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.742e-28
Identity = 81/213 (38.03%), Postives = 119/213 (55.87%), Query Frame = 1
Query:  247 LFYDLF--RNKSKKSLVTLYPLKLSIRRSSSMREGIDMPRNLFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYG--MKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDF 870
            LF  +F  R K +K ++   PL    R+ + + E +    +    +   Q     F    + +ATNNF   N +G+GG+ EVYKG   +G  VA+KRL++ T+ +   +F +E+ ++A + H N  +LLGY +EG   I V E   N SL   L+   MK +L W  RYKI  G+A G+LYLH+  +  IIHRD+KA NILL  D  P++ DF
Sbjct:  446 LFVAVFSVRTKRRKKMIGAIPLLNVKRKDTEVTEPLAENGDSITTAGSLQ-----FDFKAIVAATNNFLPINKLGQGGFGEVYKGTFPSGVQVAVKRLSK-TSGQGEREFENEVVVVAKLQHRNLVRLLGYCLEGEEKILVYEFVHNKSLDYFLFDTTMKRQLDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADF 652          
BLAST of FC929455 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.887e-28
Identity = 76/182 (41.76%), Postives = 106/182 (58.24%), Query Frame = 1
Query:  355 PRNLFVNSYDSQSPQ------KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKEK---LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDF 870
            P+  F +    + P+      K FSL ELQ AT++FS +N++G+GG+ +VYKGRL +G LVA+KRL           F +E+ +++   H N  +L G+ +     + V     NGS+AS L         L W IR +IALG A GL YLH+ C  +IIHRD+KAANILL E+FE  + DF
Sbjct:  270 PQEFFFDVPAEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLAWSIRQQIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDF 451          
The following BLAST results are available for this feature:
BLAST of FC929455 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 390
Match NameE-valueIdentityDescription
CRK15_ARATH1.286e-2844.44Cysteine-rich receptor-like protein kinase 15 OS=A... [more]
BRL1_ARATH1.286e-2840.33Serine/threonine-protein kinase BRI1-like 1 OS=Ara... [more]
Y5614_ARATH1.680e-2845.22Probable LRR receptor-like serine/threonine-protei... [more]
Y1765_ARATH2.194e-2841.88Probable LRR receptor-like serine/threonine-protei... [more]
CRK35_ARATH2.194e-2838.38Putative cysteine-rich receptor-like protein kinas... [more]
CRK17_ARATH2.194e-2837.06Cysteine-rich receptor-like protein kinase 17 OS=A... [more]
Y5977_ARATH2.865e-2845.91Probable leucine-rich repeat receptor-like protein... [more]
CRK29_ARATH2.865e-2843.14Cysteine-rich receptor-like protein kinase 29 OS=A... [more]
CRK23_ARATH3.742e-2838.03Putative cysteine-rich receptor-like protein kinas... [more]
SERK2_ARATH4.887e-2841.76Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2CC11RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2CC11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929455 ID=FC929455; Name=FC929455; organism=Citrus clementina; type=EST; length=872bp
ATTTTAGTTTCTTTTTTGACTGAGATAAGAGGACGGGACAAAGAAACAGA
ATTTAGAATGCTCTGTTCTCATCCCCTGTTTCTGGTCCAGATTTTATAAT
ATCTGGACATGGAGAAGAAGGAAGATTCATGCTCGCCGGTTGGGGTTCTT
GAGGACTATTTTCGAAGCGAAGACTCCGAAACATGTTCTTCAAAAGAACC
ATGCTCTGAAACTAAGCCGGAATCCAAATCCAATTCTCGCTGGCATTTAT
TCTACGACTTATTCAGAAACAAATCGAAGAAATCATTAGTCACATTGTAT
CCCCTCAAGCTTTCAATAAGAAGAAGCAGTAGTATGAGAGAGGGCATTGA
TATGCCGAGGAATCTTTTTGTAAATTCCTACGATTCACAGTCTCCCCAGA
AGATTTTCTCCCTCTATGAGCTGCAATCCGCCACCAACAATTTCAGCTTC
GAAAATTTGATTGGAAAGGGAGGTTATGCTGAAGTTTACAAAGGGCGTTT
GAGAAATGGGCAGCTTGTGGCAATCAAACGGCTAACAAGAGGTACAGCAG
ATGAGATTATAGCGGACTTTTTATCGGAGCTTGGGATTATGGCTCATGTC
GATCATCCTAATACTGCTAAGTTATTAGGATATGGGATTGAAGGAGGCAT
GCACATTGTTCTTGAATTGTCTCCTAATGGAAGCTTAGCTTCTCTCCTTT
ATGGTATGAAGGAGAAACTGAAATGGGGTATCAGGTATAAGATTGCGTTA
GGGGTAGCCGAAGGCTTACTTTATCTTCATGAGGGCTGTCAGAGGAGAAT
CATTCATAGAGATATTAAAGCTGCCAATATTTTGCTCACTGAGGACTTCG
AGCCTCAGATTTGTGATTTTGG
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