FC929455

Overview
NameFC929455
Unique NameFC929455
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length872
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929455 vs. ExPASy Swiss-Prot
Match: WAKLI_ARATH (Wall-associated receptor kinase-like 22 OS=Arabidopsis thaliana GN=WAKL22 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.057e-25
Identity = 63/179 (35.20%), Postives = 107/179 (59.78%), Query Frame = 1
Query:  343 GIDMPRNLFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKE--KLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDF 870
            G+ + + L     + QS  KIFS  EL+ AT+NF+   ++G+GG   VYKG L +G++VA+KR ++   ++ + +F++E+G+++ ++H N  KL+G  +E  + I V E  PNG L   L+   +   + W +R +I++ +A  L YLH      + HRD+K  NILL E +  ++ DF
Sbjct:  389 GLLLKQQLTTRGGNVQS-SKIFSSKELEKATDNFNMNRVLGQGGQGTVYKGMLVDGRIVAVKR-SKVLDEDKVEEFINEVGVLSQINHRNIVKLMGCCLETEVPILVYEHIPNGDLFKRLHHDSDDYTMTWDVRLRISVEIAGALAYLHSAASTPVYHRDVKTTNILLDEKYRAKVSDF 565          
BLAST of FC929455 vs. ExPASy Swiss-Prot
Match: WAKLD_ARATH (Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana GN=WAKL4 PE=2 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 5.057e-25
Identity = 71/200 (35.50%), Postives = 109/200 (54.50%), Query Frame = 1
Query:  295 LYPLKLSIRRSSSMR-----EGIDMPRNLFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKEK--LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDF 870
            LY      RRSS MR      G  + +        +    KIFS  EL+ AT+NF+   ++G+GG   VYKG L +G++VA+KR ++   ++ + +F++E+ ++A ++H N  KLLG  +E  + + V E  PNG L   L    +   + W +R  IA+ +A  L YLH      I HRDIK  NILL E ++ ++ DF
Sbjct:  370 LYKFIKKQRRSSRMRVFFRRNGGMLLKQQLARKEGNVEMSKIFSSNELEKATDNFNTNRVLGQGGQGTVYKGMLVDGRIVAVKR-SKAMDEDKVEEFINEVVVLAQINHRNIVKLLGCCLETEVPVLVYEFVPNGDLCKRLRDECDDYIMTWEVRLHIAIEIAGALSYLHSAASFPIYHRDIKTTNILLDEKYQVKVSDF 568          
BLAST of FC929455 vs. ExPASy Swiss-Prot
Match: WAKLA_ARATH (Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana GN=WAKL1 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.057e-25
Identity = 62/160 (38.75%), Postives = 98/160 (61.25%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKE--KLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDF 870
            KIFS  EL+ AT+NFS + ++G+GG   VYKG L +G +VA+KR ++   ++ + +F++E+ +++ ++H N  KLLG  +E  + I V E  PNG L   L+   +   + W +R +IA+ +A  L Y+H      I HRDIK  NILL E +  ++ DF
Sbjct:  415 KIFSSKELRKATDNFSIDRVLGQGGQGTVYKGMLVDGSIVAVKR-SKVVDEDKMEEFINEIVLLSQINHRNIVKLLGCCLETEVPILVYEYIPNGDLFKRLHDESDDYTMTWEVRLRIAIEIAGALTYMHSAASFPIFHRDIKTTNILLDEKYRAKVSDF 573          
BLAST of FC929455 vs. ExPASy Swiss-Prot
Match: WAKLQ_ARATH (Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana GN=WAKL20 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.627e-25
Identity = 71/188 (37.77%), Postives = 109/188 (57.98%), Query Frame = 1
Query:  334 MREGIDMPRNLFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRL----TRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHIVL-ELSPNGSLASLLYGMKEK----LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDF 870
            + + I   R   +++  +    +IF+  E+  ATNNFS +NLIG GG+ EV+K  L +G + AIKR     T+GT D+I    L+E+ I+  V+H +  +LLG  ++  + +++ E  PNG+L   L+G  ++    L W  R +IA   AEGL YLH   Q  I HRD+K++NILL E    ++ DF
Sbjct:  327 IHKNIVKEREEMLSANSTGKSSRIFTGREITKATNNFSKDNLIGTGGFGEVFKAVLEDGTITAIKRAKLNNTKGT-DQI----LNEVRILCQVNHRSLVRLLGCCVDLELPLLIYEFIPNGTLFEHLHGSSDRTWKPLTWRRRLQIAYQTAEGLAYLHSAAQPPIYHRDVKSSNILLDEKLNAKVSDF 509          
BLAST of FC929455 vs. ExPASy Swiss-Prot
Match: CRK13_ARATH (Cysteine-rich receptor-like protein kinase 13 OS=Arabidopsis thaliana GN=CRK13 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.627e-25
Identity = 64/153 (41.83%), Postives = 97/153 (63.40%), Query Frame = 1
Query:  421 LQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHIVL-ELSPNGSLASLLYGMKEK--LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDF 870
            +++ATNNFS    +G GG   V+KGRL +G+ +A+KRL+  T ++   +F +E+ ++A + H N  +LLG+ ++G   I++ E  PN SL  +L+   ++  L W  RYKI  G A G+LYLH+  Q  IIHRD+KA NILL     P++ DF
Sbjct:  353 IETATNNFS--ERLGHGGSGHVFKGRLPDGKEIAVKRLSEKT-EQSKKEFKNEVVLVAKLQHRNLVRLLGFSVKGEEKIIVYEYLPNRSLDYILFDPTKQGELDWKKRYKIIGGTARGILYLHQDSQPTIIHRDLKAGNILLDAHMNPKVADF 502          
BLAST of FC929455 vs. ExPASy Swiss-Prot
Match: RLK7_ARATH (Receptor-like protein kinase At5g59670 OS=Arabidopsis thaliana GN=At5g59670 PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.127e-24
Identity = 68/188 (36.17%), Postives = 106/188 (56.38%), Query Frame = 1
Query:  319 RRSSSMREGIDMP-RNLFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGG-MHIVLELSPNGSLASLLYGM--KEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDF 870
            ++ S++ +G+ +P R   V+   S    K F+  E+   T NF  + ++GKGG+  VY G ++  + VA+K L++ +      +F +E+ ++  V H N   L+GY  EG  + +V E  PNG L   L G      + W IR +IAL  A GL YLH GC   ++HRD+K ANILL E+F+ ++ DF
Sbjct:  524 KKMSTIVKGLRLPPRTSMVDVTFSNKKSKRFTYSEVVQVTKNF--QRVLGKGGFGMVYHGTVKGSEQVAVKVLSQSSTQGS-KEFKAEVDLLLRVHHTNLVSLVGYCCEGDYLALVYEFLPNGDLKQHLSGKGGNSIINWSIRLRIALEAALGLEYLHIGCTPPMVHRDVKTANILLDENFKAKLADF 708          
BLAST of FC929455 vs. ExPASy Swiss-Prot
Match: CRK21_ARATH (Cysteine-rich receptor-like protein kinase 21 OS=Arabidopsis thaliana GN=CRK21 PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.127e-24
Identity = 64/158 (40.51%), Postives = 94/158 (59.49%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYG--MKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDF 870
            F    +++AT+NF   N +G GG+  VYKG   NG  VA KRL++  +D+   +F +E+ ++A + H N   LLG+ +EG   I V E  PN SL   L+    + +L W  R+ I  G+  G+LYLH+  +  IIHRD+KA+NILL  +  P+I DF
Sbjct:  351 FDFRAIKAATSNFHKSNKLGHGGFGAVYKGMFPNGTEVAAKRLSK-PSDQGEPEFKNEVLLVARLQHKNLVGLLGFSVEGEEKILVYEFVPNKSLDHFLFDPIKRVQLDWPRRHNIIEGITRGILYLHQDSRLTIIHRDLKASNILLDAEMNPKIADF 507          
BLAST of FC929455 vs. ExPASy Swiss-Prot
Match: Y5389_ARATH (Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana GN=At5g38990 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.471e-24
Identity = 67/161 (41.61%), Postives = 98/161 (60.87%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNG-QLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGY-GIEGGMHIVLELSPNGSLASLLY----GMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDF 870
            FS+YE++SATN+F  + +IG GG+  VYKGR+  G  LVA+KRL   T+++   +F +EL +++ + H +   L+GY   +  M +V E  P+G+L   L+         L W  R +I +G A GL YLH G +  IIHRDIK  NILL E+F  ++ DF
Sbjct:  513 FSIYEIKSATNDFEEKLIIGVGGFGSVYKGRIDGGATLVAVKRL-EITSNQGAKEFDTELEMLSKLRHVHLVSLIGYCDDDNEMVLVYEYMPHGTLKDHLFRRDKASDPPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENFVAKVSDF 672          
BLAST of FC929455 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.471e-24
Identity = 70/161 (43.48%), Postives = 96/161 (59.63%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGY-GIEGGMHIVLELSPNGSLASLLYGMKEK---LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDF 870
            K F+  ELQ AT+NFS +N++G+GG+ +VYKG L +   VA+KRLT   +    A F  E+ +++   H N  +L+G+   +    +V     N SLA  L  +K     L W  R +IALG A G  YLHE C  +IIHRD+KAAN+LL EDFE  + DF
Sbjct:  276 KRFAWRELQLATDNFSEKNVLGQGGFGKVYKGVLPDNTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTQTERLLVYPFMQNLSLAHRLREIKAGDPVLDWETRKRIALGAARGFEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDF 436          
BLAST of FC929455 vs. ExPASy Swiss-Prot
Match: Y1357_ARATH (Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.471e-24
Identity = 72/203 (35.47%), Postives = 117/203 (57.64%), Query Frame = 1
Query:  268 NKSKKSLVTLYPLKLSIRRSSSMREGIDMPRNLFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGG-MHIVLELSPNGSLASLLYGMK-EKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAANILLTEDFEPQICDF 870
            ++SK +     PL L +  S++  +      +L +N+  + +  + F+L E+++AT NF     IG GG+ +VY+G L +G L+AIKR T  +  + +A+F +E+ +++ + H +   L+G+  E   M +V E   NG+L S L+G     L W  R +  +G A GL YLH G +R IIHRD+K  NILL E+F  ++ DF
Sbjct:  464 DESKNNPPGWRPLFLHVNNSTANAKATG--GSLRLNTLAASTMGRKFTLAEIRAATKNFDDGLAIGVGGFGKVYRGELEDGTLIAIKRATPHS-QQGLAEFETEIVMLSRLRHRHLVSLIGFCDEHNEMILVYEYMANGTLRSHLFGSNLPPLSWKQRLEACIGSARGLHYLHTGSERGIIHRDVKTTNILLDENFVAKMSDF 663          
The following BLAST results are available for this feature:
BLAST of FC929455 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 390
Match NameE-valueIdentityDescription
WAKLI_ARATH5.057e-2535.20Wall-associated receptor kinase-like 22 OS=Arabido... [more]
WAKLD_ARATH5.057e-2535.50Wall-associated receptor kinase-like 4 OS=Arabidop... [more]
WAKLA_ARATH5.057e-2538.75Wall-associated receptor kinase-like 1 OS=Arabidop... [more]
WAKLQ_ARATH8.627e-2537.77Wall-associated receptor kinase-like 20 OS=Arabido... [more]
CRK13_ARATH8.627e-2541.83Cysteine-rich receptor-like protein kinase 13 OS=A... [more]
RLK7_ARATH1.127e-2436.17Receptor-like protein kinase At5g59670 OS=Arabidop... [more]
CRK21_ARATH1.127e-2440.51Cysteine-rich receptor-like protein kinase 21 OS=A... [more]
Y5389_ARATH1.471e-2441.61Probable receptor-like protein kinase At5g38990 OS... [more]
Y5129_ARATH1.471e-2443.48Probable LRR receptor-like serine/threonine-protei... [more]
Y1357_ARATH1.471e-2435.47Probable receptor-like protein kinase At1g30570 OS... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2CC11RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH2CC11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929455 ID=FC929455; Name=FC929455; organism=Citrus clementina; type=EST; length=872bp
ATTTTAGTTTCTTTTTTGACTGAGATAAGAGGACGGGACAAAGAAACAGA
ATTTAGAATGCTCTGTTCTCATCCCCTGTTTCTGGTCCAGATTTTATAAT
ATCTGGACATGGAGAAGAAGGAAGATTCATGCTCGCCGGTTGGGGTTCTT
GAGGACTATTTTCGAAGCGAAGACTCCGAAACATGTTCTTCAAAAGAACC
ATGCTCTGAAACTAAGCCGGAATCCAAATCCAATTCTCGCTGGCATTTAT
TCTACGACTTATTCAGAAACAAATCGAAGAAATCATTAGTCACATTGTAT
CCCCTCAAGCTTTCAATAAGAAGAAGCAGTAGTATGAGAGAGGGCATTGA
TATGCCGAGGAATCTTTTTGTAAATTCCTACGATTCACAGTCTCCCCAGA
AGATTTTCTCCCTCTATGAGCTGCAATCCGCCACCAACAATTTCAGCTTC
GAAAATTTGATTGGAAAGGGAGGTTATGCTGAAGTTTACAAAGGGCGTTT
GAGAAATGGGCAGCTTGTGGCAATCAAACGGCTAACAAGAGGTACAGCAG
ATGAGATTATAGCGGACTTTTTATCGGAGCTTGGGATTATGGCTCATGTC
GATCATCCTAATACTGCTAAGTTATTAGGATATGGGATTGAAGGAGGCAT
GCACATTGTTCTTGAATTGTCTCCTAATGGAAGCTTAGCTTCTCTCCTTT
ATGGTATGAAGGAGAAACTGAAATGGGGTATCAGGTATAAGATTGCGTTA
GGGGTAGCCGAAGGCTTACTTTATCTTCATGAGGGCTGTCAGAGGAGAAT
CATTCATAGAGATATTAAAGCTGCCAATATTTTGCTCACTGAGGACTTCG
AGCCTCAGATTTGTGATTTTGG
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