FC929746

Overview
NameFC929746
Unique NameFC929746
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC929746 vs. ExPASy Swiss-Prot
Match: RL32_SULIA (50S ribosomal protein L32e OS=Sulfolobus islandicus (strain M.16.27) GN=rpl32e PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.116e-12
Identity = 34/98 (34.69%), Postives = 59/98 (60.20%), Query Frame = -3 
Query:  278 KISVKENWRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTNK 571
            ++  +E WRRP G D++ R K +G   + ++GY   K+ R + P+G ++ +VHNVN+L  +     +    IA +V  KKR EI+ +A +L + V+N+
Sbjct:   37 RLGRQEKWRRPYGRDNKTRLKVRGFPAIVSVGYRLPKEVRGFHPSGLRQVIVHNVNDLVKVQNQKDSVIVTIASSVGFKKRLEILNKARELGLKVSNE 134
The following BLAST results are available for this feature:
BLAST of FC929746 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
RL32_SULIA6.116e-1234.6950S ribosomal protein L32e OS=Sulfolobus islandicu... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3AB05RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3AB05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929746 ID=FC929746; Name=FC929746; organism=Citrus clementina; type=EST; length=723bp
TTTTTTTTTTTTTTTTTANTGCAAAATATGCATAGTTAATAAAAGGCTTG
GCCATAAACCTTAACTCCTAAGTTGACATAACATTAATCATGCTCCACAA
AAGACAACAAATTCAAAATATCATTCAGGTGACAAATAGAAAATACATCA
TAATTCAACCCTGGAAATGTTCATCCATTCCAAAGACAACCTAGGAAACA
TTTGGCCAAAAGCAAACACTAACACAAAATATAGAAACCAATTTTTACTC
CTCCTCCTGGCTGCGCAACCTGGCCAATTTGTTGGTGACCACAACATCCA
ATTGTGCAGCACGCTCGACAATCTCCTTTCTCTTCTTGGTTGATACATTG
TGGGCTATCTCAGCACAATAAGTCCTGTTGTGCATCATCAAGAGTTCCAG
TTCATTGACATTGTGCACAACAAACTTCTTGAATCCATTGGGCAGATAGT
GGCGTGTTTTCTTGTCCGAGCCGTAGCCAATATTGGGCATCAGAACACAT
CCTTTGAACTTTCTCCTGACACGTGAATCAATACCCTTCGGCCTTCGCCA
ATTTTCCTTCACTGATATCTTCCTGTCACTCTGGGGCCTCTTGAACTTCT
TGAGACGCTTCTTCACTATCTTCTTGGGCAGCAAAGGAACAGCCATTTTT
CTGAAACGATGAGCCGCGGCTTCTGCCAACAAAAGACAGTTGAGAACAGC
AAACATTCGGAAAAAAAAAAAAA
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