FC929817
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: SSY22_ORYSJ (Soluble starch synthase 2-2, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=SSII-2 PE=2 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 9.175e-13 Identity = 47/112 (41.96%), Postives = 63/112 (56.25%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT--QALAEMMKNGMAQDLSWKGPAKKWEETLL 332 AD +L+PSRFEPCGL QL+AM YGTVP+V + GGL DTV + F +G EA +D + L TY ++ + GMAQDLSW A+ +E+ L+ Sbjct: 583 ADVLLMPSRFEPCGLNQLYAMAYGTVPVVHAVGGLRDTVAPFDPFADTGLGWTFDRAEANRMID------ALGHCLNTYRNYKESWRGLQARGMAQDLSWDHAAELYEDVLV 688
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA_PROMA (Glycogen synthase OS=Prochlorococcus marinus GN=glgA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.175e-13 Identity = 53/142 (37.32%), Postives = 73/142 (51.41%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAG-SEPGIDGEEIAPLAKENVATP 413 +D L+PSRFEPCG+ QL AMRYG++PIV + GGLVDTV + TGF F +P+D + VR A ++ E+ K M Q SW+ A ++E + EV+G EP D E+ + A P Sbjct: 348 SDAFLMPSRFEPCGISQLLAMRYGSIPIVRNVGGLVDTVIPHDPINKSGTGFCFDRF-------EPIDF--YTALVRSWEAFRHRRSWKELQKRAMTQMYSWERSAMEYE--TMYKEVSGYKEPSPDAIEVEKFSVGQDADP 478
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA_NOVAD (Glycogen synthase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=glgA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.175e-13 Identity = 41/105 (39.05%), Postives = 56/105 (53.33%), Query Frame = 3 Query: 12 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGPAKKWEE 323 D IL+PSRFEPCGL QL+ + YG VP+VA TGGL DTV + M + + + V+ +VS + RA+ Y M + GM D SW K + + Sbjct: 372 DAILVPSRFEPCGLTQLYGLAYGCVPVVARTGGLADTVIDANLAAVMAGVATGVQ-FEGVNYPSVSDAISRAVTLYRQPDVWRAMQRAGMKTDFSWSRSGKAYAD 475
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA_NITEU (Glycogen synthase OS=Nitrosomonas europaea GN=glgA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.175e-13 Identity = 44/110 (40.00%), Postives = 58/110 (52.73%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE---------EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL-ATYGTQALAEMMKNGMAQDLSWKGPA 308 AD L+PSRFEPCGL Q+++ RYGT PIV +TGGL+DTV E +GF + D A + RA+ A Y T+ + NGM +D SW+ A Sbjct: 383 ADCFLMPSRFEPCGLNQMYSQRYGTPPIVHTTGGLIDTVTDLAPDTPAGESASGFHFHEMTAD----------AFMNGIGRAIDAYYNTRLWKTLQHNGMRKDFSWRSSA 482
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA_GEOUR (Glycogen synthase OS=Geobacter uraniireducens (strain Rf4) GN=glgA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.175e-13 Identity = 42/106 (39.62%), Postives = 63/106 (59.43%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ-ALAEMMKNGMAQDLSWKGPAKKWEE 323 +D L+PS +EPCGL Q+ A+RYG VP+V TGGL DTV + Q G+ + + + A+ TV R+L + + A ++MK GM+ D SW A+++EE Sbjct: 372 SDIFLMPSHYEPCGLGQMIALRYGAVPLVRKTGGLADTVFDE----QDGATEPNGFSFEDYTPEALWETVSRSLQAFDDKGAWKKLMKRGMSCDYSWDASARRYEE 473
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: SSY2_SOLTU (Granule-bound starch synthase 2, chloroplastic/amyloplastic OS=Solanum tuberosum GN=SS2 PE=1 SV=3) HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12 Identity = 45/122 (36.89%), Postives = 61/122 (50.00%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE--------------MMKNGMAQDLSWKGPAKKWEETLL 332 AD +L+PSRFEPCGL QL+AM+YGT+P+V + GGL DTV + DP + + + T RA A+ AL + M QDLSW A+ +EE L+ Sbjct: 656 ADILLMPSRFEPCGLNQLYAMKYGTIPVVHAVGGLRDTV----------------QPFDPFNESGLGWTFSRAEASQLIHALGNCLLTYREYKKSWEGIQTRCMTQDLSWDNAAQNYEEVLI 761
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA_SHIFL (Glycogen synthase OS=Shigella flexneri GN=glgA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12 Identity = 45/117 (38.46%), Postives = 61/117 (52.14%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-----EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNLE 341 AD IL+PSRFEPCGL QL+ ++YGT+P+V TGGL DTV E G G D A ++ +RRA + +L + + MA D SW+ AK + E L+ Sbjct: 367 ADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNA------WSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK 477
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA_SHIF8 (Glycogen synthase OS=Shigella flexneri serotype 5b (strain 8401) GN=glgA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12 Identity = 45/117 (38.46%), Postives = 61/117 (52.14%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-----EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNLE 341 AD IL+PSRFEPCGL QL+ ++YGT+P+V TGGL DTV E G G D A ++ +RRA + +L + + MA D SW+ AK + E L+ Sbjct: 367 ADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNA------WSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK 477
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA_SHIDS (Glycogen synthase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=glgA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12 Identity = 45/117 (38.46%), Postives = 61/117 (52.14%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-----EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNLE 341 AD IL+PSRFEPCGL QL+ ++YGT+P+V TGGL DTV E G G D A ++ +RRA + +L + + MA D SW+ AK + E L+ Sbjct: 367 ADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNA------WSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK 477
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA_SHIBS (Glycogen synthase OS=Shigella boydii serotype 4 (strain Sb227) GN=glgA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12 Identity = 45/117 (38.46%), Postives = 61/117 (52.14%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-----EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNLE 341 AD IL+PSRFEPCGL QL+ ++YGT+P+V TGGL DTV E G G D A ++ +RRA + +L + + MA D SW+ AK + E L+ Sbjct: 367 ADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNA------WSLLRAIRRAFVLWSRASLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK 477 The following BLAST results are available for this feature:
BLAST of FC929817 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 238
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929817 ID=FC929817; Name=FC929817; organism=Citrus clementina; type=EST; length=707bpback to top |