FC929817
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA_ANOFW (Glycogen synthase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=glgA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.044e-12 Identity = 51/123 (41.46%), Postives = 70/123 (56.91%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE-------EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNLEVAGS 353 AD L+PS+FEPCGL Q+ AMRYG VPIV TGGL DTV+ EG TGF +F+ + T++RA + Y + + E +MK M++D SW A K+ + L + +AGS Sbjct: 368 ADMFLMPSKFEPCGLGQMIAMRYGAVPIVRETGGLNDTVQSFNELTKEG-TGFTFKNFNAH----------DMLYTIQRARSFYEQKEIWETIMKQAMSRDYSWAKSAFKYNQ-LYDELMAGS 478
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA_PSESM (Glycogen synthase OS=Pseudomonas syringae pv. tomato GN=glgA PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.669e-12 Identity = 36/111 (32.43%), Postives = 60/111 (54.05%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMK-NGMAQDLSWKGPAKKWEETLLNL 338 +DF+L+PSR+EPCGL Q++A R+G++P+ +TGGL DT+E+G TGF +V+ + + + R + L M+ MA +W + + E +L Sbjct: 374 SDFLLMPSRYEPCGLSQMYAQRFGSLPVARNTGGLADTIEDGVTGFLFNESTVE----------SYTEALNRTFQVFAHPELLNAMRCRAMAAPFNWHQAVEPYAELYRDL 474
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA_ESCF3 (Glycogen synthase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=glgA PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.669e-12 Identity = 43/117 (36.75%), Postives = 60/117 (51.28%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG-----FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNLE 341 AD IL+PSRFEPCGL QL+ ++YGT+P+V TGGL DTV + G G D A ++ +RRA + +L + + M+ D SW AK + E L+ Sbjct: 367 ADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDSSLENLADGIASGFVFEDSNA------WSLLRAIRRAFVLWSRPSLWRFVQRQAMSMDFSWHVAAKSYRELYYRLK 477
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA2_SYNJB (Glycogen synthase 2 OS=Synechococcus sp. GN=glgA2 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.669e-12 Identity = 47/121 (38.84%), Postives = 62/121 (51.24%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGPAKKW---EETLLNLEVAGSEP 359 AD L+PSRFEPCG+ Q+ AMRYG VPIV TGGLVDTV +G+ D + T + RA + + + K GMA D SW A ++ E +LNL + +P Sbjct: 361 ADAFLMPSRFEPCGISQMIAMRYGCVPIVRRTGGLVDTVSHHIPSKGIGT----GYCFDRYEALDFYTCLARAWEAFQHKETWQALQKRGMASDFSWHRSALEYLRMYELILNLPLLPEKP 477
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA2_RHIME (Glycogen synthase 2 OS=Rhizobium meliloti GN=glgA2 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.669e-12 Identity = 39/106 (36.79%), Postives = 59/106 (55.66%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEE 323 AD +L+PSRFEPCGL QL+A+RYG VP+VA TGGL +T+ + + + P+D + +RR Y + + E + + GM D SW A ++ + Sbjct: 366 ADAMLVPSRFEPCGLTQLYALRYGCVPVVARTGGLSETIIDANDAALHAHVATGIQFA-PIDEDGLRHALRRTFRLYRLRRVWEGLRRQGMKTDCSWHRSAARYAD 470
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: SSY23_ORYSJ (Soluble starch synthase 2-3, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=SSII-3 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.486e-12 Identity = 43/110 (39.09%), Postives = 62/110 (56.36%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG--TQALAEMMKNGMAQDLSWKGPAKKWEETLL 332 AD +++PSRFEPCGL QL+AM YGTVP+V + GGL DT+ F F+ + +P + + L TY ++ + GM+QDLSW A+ +EE L+ Sbjct: 699 ADVLVMPSRFEPCGLNQLYAMAYGTVPVVHAVGGLRDTM-SAFDPFEDTGLGWTFDRAEP---HKLIEALGHCLETYRKYKESWRGLQVRGMSQDLSWDHAAELYEEVLV 804
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA_THEM4 (Glycogen synthase OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=glgA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.486e-12 Identity = 43/109 (39.45%), Postives = 61/109 (55.96%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV----EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL--AEMMKNGMAQDLSWKGPAKKW 317 +D L+PSR+EPCGL Q++++RYGT+PIV TGGL DTV E TG G D + + V RAL Y + + +++ N M DLSW+ AK++ Sbjct: 369 SDMFLMPSRYEPCGLGQMYSLRYGTIPIVRYTGGLADTVLEYDENKMTGNGFGFVEYDS--------SKLLKAVARALDFYKNKKVHWKKLIDNAMKTDLSWERSAKEY 469
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA_PSEU2 (Glycogen synthase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=glgA PE=3 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 3.486e-12 Identity = 35/97 (36.08%), Postives = 56/97 (57.73%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMK-NGMAQDLSW 296 +DF+L+PSR+EPCGL Q++A R+G++P+ +TGGL DT+E+G TGF +V+ + + + RA + L M+ MA +W Sbjct: 374 SDFLLMPSRYEPCGLSQMYAQRFGSLPVARNTGGLADTIEDGVTGFLFNESTVE----------SYTQALDRAFQVFAHPELLNAMRCRAMAAPFNW 460
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA_PROM9 (Glycogen synthase OS=Prochlorococcus marinus (strain MIT 9312) GN=glgA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.486e-12 Identity = 52/142 (36.62%), Postives = 72/142 (50.70%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAG-SEPGIDGEEIAPLAKENVATP 413 +D L+PSRFEPCG+ QL AMRYG+VPIV GGLVDTV TGF F +P+D ++ VR A + + K M+Q+ SW+ A ++E ++ +V G EP D E+ + A P Sbjct: 348 SDAFLMPSRFEPCGISQLLAMRYGSVPIVRRVGGLVDTVLPHDPENNSGTGFCFDRF-------EPIDF--YTSLVRSWEAFRHKDSWELLQKRAMSQEFSWQRSALEYE--MMYKDVCGIKEPSPDVAEVEKFSYGQSADP 478
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA_PECCP (Glycogen synthase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=glgA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.486e-12 Identity = 41/109 (37.61%), Postives = 57/109 (52.29%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-----EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKW 317 AD I++PSRFEPCGL QL+ ++YGT+P+V TGGL DTV E G G DC V ++S +RR + L + + MA D W+ A+ + Sbjct: 367 ADVIMVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGLASGFVFNDC------SVGSLSRAIRRVFVLWSRPTLWRYVQRQAMAMDFGWQVAAQAY 469 The following BLAST results are available for this feature:
BLAST of FC929817 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 238
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929817 ID=FC929817; Name=FC929817; organism=Citrus clementina; type=EST; length=707bpback to top |