FC929817
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA_GEOTN (Glycogen synthase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=glgA PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.325e-11 Identity = 44/113 (38.94%), Postives = 63/113 (55.75%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE-------EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMM-KNGMAQDLSWKGPAKKWEE 323 AD L+PS FEPCGL Q+ A+RYGT+PIV TGGL DTV+ EG GF +F+ + T+RRAL+ Y ++ E + + M D SW+ A ++++ Sbjct: 368 ADLFLMPSLFEPCGLSQMIALRYGTIPIVRETGGLNDTVQSYNEITKEG-NGFSFTNFNAH----------DMLYTIRRALSFYRQPSVWEQLTERAMRGDYSWRRSANQYKQ 469
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA_THET8 (Glycogen synthase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=glgA PE=3 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.730e-11 Identity = 42/105 (40.00%), Postives = 56/105 (53.33%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEE 323 A+ +L+PSRFEPCGL+Q+ A RYGT P+ + GGL DTVE+G G V E P + + R A EM M +D SW+GPA+ + E Sbjct: 340 AEAVLVPSRFEPCGLVQMIASRYGTPPVARAVGGLKDTVEDGRGG-------VLFETYHPEGLLYGVLRLFRLGA-------EEMGLRAMEKDFSWEGPARAYRE 430
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA_NITEC (Glycogen synthase OS=Nitrosomonas eutropha (strain C91) GN=glgA PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.730e-11 Identity = 38/113 (33.63%), Postives = 60/113 (53.10%), Query Frame = 3 Query: 12 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV---------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGPAKKWE 320 D L+PSRFEPCGL Q+++ YGT P+V +TGGL+DTV ++ +GF + D + ++RA+ Y T+ + +NGM +D SW+ A ++ Sbjct: 384 DCFLMPSRFEPCGLNQMYSQHYGTPPVVHATGGLMDTVVDLTPETLADKSASGFHFHEMTAD----------SFMEGIKRAINAYHNTRLWKNLQRNGMQKDFSWQASASAYQ 486
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA_JANSC (Glycogen synthase OS=Jannaschia sp. (strain CCS1) GN=glgA PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.730e-11 Identity = 38/103 (36.89%), Postives = 54/103 (52.43%), Query Frame = 3 Query: 12 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG-TQALAEMMKNGMAQDLSWKGPAKKW 317 D IL+PSRFEPCGL QL+ +RYGT+P+VA TGGL DTV + + P+ A++ R Y + M++N M Q + W A ++ Sbjct: 361 DCILVPSRFEPCGLTQLYGLRYGTLPLVALTGGLADTVINASPAALARRVATGIQ-FSPITAEALANAFSRLCDLYADRKTWTAMVRNAMKQPVGWDMSASRY 462
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA_HALHL (Glycogen synthase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=glgA PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.730e-11 Identity = 43/107 (40.19%), Postives = 62/107 (57.94%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGS-FSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMK-NGMAQDLSWKGPAKKWEE 323 +D L+PSRFEPCGL QL+++RYGT P+V TGGL DTV + Q G+ F + D AA++ V RALA + + ++ GMA SW A+ +++ Sbjct: 366 SDLFLMPSRFEPCGLNQLYSLRYGTPPVVYPTGGLADTVVDVDAHPQSGNGFHLAAS-----DGAALAAAVERALAHWQDRPTWHAIQARGMAGTYSWAASAQAYQD 467
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA_CHLCV (Glycogen synthase OS=Chlamydophila caviae GN=glgA PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.730e-11 Identity = 33/46 (71.74%), Postives = 34/46 (73.91%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGF 146 AD I IPS FEPCGL QL MRYGTVP+V STGGL DTV G GF Sbjct: 372 ADMICIPSHFEPCGLTQLIGMRYGTVPLVRSTGGLADTVVTGINGF 417
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA_CHLAB (Glycogen synthase OS=Chlamydophila abortus GN=glgA PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.730e-11 Identity = 33/46 (71.74%), Postives = 34/46 (73.91%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGF 146 AD I IPS FEPCGL QL MRYGTVP+V STGGL DTV G GF Sbjct: 372 ADMICIPSHFEPCGLTQLIGMRYGTVPLVRSTGGLADTVAAGVNGF 417
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA_BACSU (Glycogen synthase OS=Bacillus subtilis GN=glgA PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.730e-11 Identity = 45/123 (36.59%), Postives = 65/123 (52.85%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-----EEGF-TGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSE 356 +D L+PS+FEPCGL QL A++YG +PIV TGGL DTV EEG GF +F+ + T+ RAL+ Y Q + ++K M D SW AK+++ + +G + Sbjct: 369 SDMFLMPSKFEPCGLGQLIALQYGAIPIVRETGGLYDTVRAYQEEEGTGNGFTFSAFNAH----------DLKFTIERALSFYCQQDVWKSIVKTAMNADYSWGKSAKEYQRIFEQVTRSGRD 481
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA_KOSOT (Glycogen synthase OS=Kosmotoga olearia (strain TBF 19.5.1) GN=glgA PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.260e-11 Identity = 39/104 (37.50%), Postives = 59/104 (56.73%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKW 317 +D L+PSR+EPCGL Q+ AMRYGT+P+V TGGL DTV+E F + + + + + V +A+ Y + L ++M N M D SW A+++ Sbjct: 359 SDMFLMPSRYEPCGLGQMFAMRYGTIPVVRFTGGLRDTVKE----FNPETLEGNGFGFEEYNPDKLLEAVEKAIKIYENKTLWNQLMLNAMNTDCSWDKSAREY 458
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA_HAES1 (Glycogen synthase OS=Haemophilus somnus (strain 129Pt) GN=glgA PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.260e-11 Identity = 39/104 (37.50%), Postives = 59/104 (56.73%), Query Frame = 3 Query: 12 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWE 320 D IL+PSRFEPCGL QL+ ++YGT+P+V STGGL DTV + + + + + DV + + A + + E ++ N M QD SW+ AK ++ Sbjct: 368 DVILVPSRFEPCGLTQLYGLKYGTLPLVRSTGGLADTVIDS-SSENIKARHATGFVFNDADVGGLCYGIDSAFTLWRKPSQWESVIVNAMEQDFSWQTSAKGYQ 470 The following BLAST results are available for this feature:
BLAST of FC929817 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 238
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929817 ID=FC929817; Name=FC929817; organism=Citrus clementina; type=EST; length=707bpback to top |