FC929817
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA_CELJU (Glycogen synthase OS=Cellvibrio japonicus (strain Ueda107) GN=glgA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.855e-11 Identity = 44/113 (38.94%), Postives = 63/113 (55.75%), Query Frame = 3 Query: 12 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE---GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMK-NGMAQDLSWKGPAKKWEETLLNL 338 D L+PS FEPCGL Q++++RYGT+P+V + GGL DTV+E G F + D +D+ A + RAL Y A + ++ N M +D SW+ AK +E NL Sbjct: 372 DIFLMPSIFEPCGLNQMYSLRYGTLPVVHAVGGLKDTVQERPLDNPGEDANGFVF--HSPDALDLHA---AILRALDAYRQPATWKQLQINAMNRDSSWEQSAKAYEAIYANL 479
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA_BACCQ (Glycogen synthase OS=Bacillus cereus (strain Q1) GN=glgA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.855e-11 Identity = 45/113 (39.82%), Postives = 64/113 (56.64%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNL 338 +D L+PS FEPCGL QL A+ YGT+PIV TGGL DTV+ + TG G + A D + TVRRA+ Y + + E ++K M +D SW+ A +++ +L Sbjct: 368 SDLFLMPSLFEPCGLGQLIALAYGTIPIVRETGGLNDTVQSYDEETGEGNGFSFTNFNAHDMLH------TVRRAIEFYHDKPVWEQLVKQAMTEDYSWEKSALAYKKLYKSL 474
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA_EUBE2 (Glycogen synthase OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=glgA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.034e-11 Identity = 45/110 (40.91%), Postives = 61/110 (55.45%), Query Frame = 3 Query: 12 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE-----EG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEE 323 D L+PS FEPCGL QL ++RYGTVPIV TGGL DTVE EG TGF +++ E + V+ A + + + +++ GM D SW A+K+EE Sbjct: 372 DAFLMPSLFEPCGLSQLMSLRYGTVPIVRETGGLKDTVEPYNEYEGKGTGFSFANYNAH-EMLGIVNYA-------KDVYYNHKREWNKIVDRGMKTDFSWNSSARKYEE 473
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA_DECAR (Glycogen synthase OS=Dechloromonas aromatica (strain RCB) GN=glgA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.034e-11 Identity = 40/108 (37.04%), Postives = 59/108 (54.63%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV----EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKW 317 AD ++PSRFEPCGL Q++++RYGT PIV +TGGL DTV E+ F +D + A+ T+ T+ + L + +NGM +D SW A ++ Sbjct: 371 ADCFVMPSRFEPCGLNQMYSLRYGTPPIVRATGGLADTVVDVCEDTLADKSANGFVLDGDTPH-----ALWLTIEHVCRTWQDKKLWQRIQQNGMRRDFSWTHAANEY 473
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA2_SYNJA (Glycogen synthase 2 OS=Synechococcus sp. (strain JA-3-3Ab) GN=glgA2 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.034e-11 Identity = 44/114 (38.60%), Postives = 58/114 (50.88%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGPAKKW---EETLLNL 338 AD L+PSRFEPCG+ Q+ AMRYG VPI TGGLVDTV +G+ D + T + RA + + K GMA D SW+ A ++ E ++NL Sbjct: 359 ADVFLMPSRFEPCGISQMIAMRYGCVPIARRTGGLVDTVSHHIPSKGIGT----GYCFDRYEALDFYTCLARAWEAFQHKDTWQALQKRGMATDFSWQRSALEYLRLYELIMNL 468
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA2_AGRT5 (Glycogen synthase 2 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=glgA2 PE=3 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 5.034e-11 Identity = 41/113 (36.28%), Postives = 60/113 (53.10%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDT--------VEEGF-TGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKW 317 +DFI+ PSRFEPCGL QL+A+RYG +PIV+ TGGL +T +E G TGFQ +P + + + RA++ Y + L + M + SW A ++ Sbjct: 363 SDFIIQPSRFEPCGLTQLYALRYGALPIVSRTGGLAETIIDANDAAIEAGVATGFQF----------EPANEDDLRAALERAISAYNDRELFRRLQTQAMQANFSWDKSAAQY 465
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA1_SYNY3 (Glycogen synthase 1 OS=Synechocystis sp. (strain PCC 6803) GN=glgA1 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.034e-11 Identity = 51/140 (36.43%), Postives = 71/140 (50.71%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA-LAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVA 407 AD L+PSRFEPCGL QL AMRYG +PIV TGGLVDTV E TG+ + +P+D T + RA + +A ++ + M D SW A ++ + V G EE++P+ +E +A Sbjct: 348 ADVFLMPSRFEPCGLSQLMAMRYGCIPIVRRTGGLVDTVSFYDPINEAGTGYCFDRY-------EPLD---CFTAMVRAWEGFRFKADWQKLQQRAMRADFSWYRSAGEYIKVYKG--VVGKP-----EELSPMEEEKIA 470
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA1_NITOC (Glycogen synthase 1 OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=glgA1 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.034e-11 Identity = 40/114 (35.09%), Postives = 57/114 (50.00%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY--GTQALAEMMKNGMAQDLSWKGPAKKW 317 AD +++PS +EPCGL Q+ AM+YGTVPIV GGL DTV + GF F+ + + + RA+ + Q E+M+NGM D SW P + + Sbjct: 374 ADMLIVPSIYEPCGLTQMIAMKYGTVPIVRHVGGLADTVFDANYAHKPYHERNGFVFHDFNHE----------GIEAALHRAIGLWYEYPQYFRELMENGMRYDFSWNHPGQHY 477
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA_STRSV (Glycogen synthase OS=Streptococcus sanguinis (strain SK36) GN=glgA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.575e-11 Identity = 43/118 (36.44%), Postives = 60/118 (50.85%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE------GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG--TQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 338 +D L+PSRFEPCGL Q+ AMRYGT+P+V GGL DTVE TGF +FS ++ T + AL Y +A + + M +D SW +K + + +L Sbjct: 368 SDIFLMPSRFEPCGLSQMMAMRYGTLPLVHEVGGLRDTVEPYNVYTGKGTGFSFNNFS----------GYWLTWTFKEALKLYADDKEAWKSLQEQAMERDFSWDTASKAYSDLYQSL 475
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA_STRGC (Glycogen synthase OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=glgA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.575e-11 Identity = 44/105 (41.90%), Postives = 57/105 (54.29%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE-------EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA--LATYGTQALAEMMKNGMAQDLSW 296 +D L+PSRFEPCGL Q+ AMRYGT+P+V GGL DTVE +G TGF +FS +S T + A L T+ +A M + M +D SW Sbjct: 368 SDIFLMPSRFEPCGLSQMMAMRYGTLPLVHEVGGLRDTVEPYNVYTGQG-TGFSFNNFS----------GYWLSWTFKEALNLYTHDKEAWKSMQEQAMERDFSW 461 The following BLAST results are available for this feature:
BLAST of FC929817 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 238
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929817 ID=FC929817; Name=FC929817; organism=Citrus clementina; type=EST; length=707bpback to top |