FC929817
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA_XANC8 (Glycogen synthase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=glgA PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.084e-13 Identity = 41/104 (39.42%), Postives = 59/104 (56.73%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKN-GMAQDLSWKGPAKKW 317 ADF+L+PSRFEPCGL Q++A R+G +PI +TGGL+DTV++G TGF S + A+ + RA T+ +L M+ M + W KK+ Sbjct: 363 ADFLLMPSRFEPCGLSQMYAQRFGCLPIAHATGGLIDTVDDGVTGFLFQQASAE----------ALRRCLERAFRTFRLPSLLSAMRRAAMLRPSGWDVAGKKY 456
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA_SYNPW (Glycogen synthase OS=Synechococcus sp. (strain WH7803) GN=glgA PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.084e-13 Identity = 52/142 (36.62%), Postives = 73/142 (51.41%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAG-SEPGIDGEEIAPLAKENVATP 413 +D L+PSRFEPCG+ QL+AMRYG VP+V GGLVDTV ++ TGF F +PVD + VR A ++ E+ + GM QD SW A +++ + +V G EP D + ++ A P Sbjct: 348 SDAFLMPSRFEPCGISQLYAMRYGCVPVVRKVGGLVDTVPPHDPRQKSGTGFCFDRF-------EPVDF--YTALVRAWEAFRHPESWKELQRRGMEQDYSWARSALEYDR--MYRDVCGLKEPSPDAAAVEQFSQGQEADP 478
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA_GEOSF (Glycogen synthase OS=Geobacter sp. (strain FRC-32) GN=glgA PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.084e-13 Identity = 46/107 (42.99%), Postives = 61/107 (57.01%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKWEE 323 +D L+PSR+EPCGL Q+ A+RYG VP+V TGGL DT+ +E + FS D A+ + RA+ Y +A +MMK GMA D SW A K+EE Sbjct: 372 SDIFLMPSRYEPCGLGQMIALRYGAVPVVRKTGGLADTIFDERDQPKEPNGFS-----FDEYTPEALWEALSRAVEAYSDKAAWKKMMKRGMAGDFSWNTSALKYEE 473
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA_XANOR (Glycogen synthase OS=Xanthomonas oryzae pv. oryzae GN=glgA PE=3 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.415e-13 Identity = 42/104 (40.38%), Postives = 59/104 (56.73%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA-LAEMMKNGMAQDLSWKGPAKKW 317 ADF+L+PSRFEPCGL Q++A R+G +PI +TGGL+DTV++G TGF SV+ A+ + RA T+ LA M + M + W K+ Sbjct: 398 ADFLLMPSRFEPCGLSQMYAQRFGCLPIAHATGGLIDTVDDGVTGFLFQHASVE----------ALRRCLERAFRTFRLPGLLAAMRRAAMLRPSGWDVAGNKY 491
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA_XANOP (Glycogen synthase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=glgA PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.415e-13 Identity = 42/104 (40.38%), Postives = 59/104 (56.73%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA-LAEMMKNGMAQDLSWKGPAKKW 317 ADF+L+PSRFEPCGL Q++A R+G +PI +TGGL+DTV++G TGF SV+ A+ + RA T+ LA M + M + W K+ Sbjct: 398 ADFLLMPSRFEPCGLSQMYAQRFGCLPIAHATGGLIDTVDDGVTGFLFQHASVE----------ALRRCLERAFRTFRLPGLLAAMRRAAMLRPSGWDVAGNKY 491
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA_XANOM (Glycogen synthase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=glgA PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.415e-13 Identity = 42/104 (40.38%), Postives = 59/104 (56.73%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA-LAEMMKNGMAQDLSWKGPAKKW 317 ADF+L+PSRFEPCGL Q++A R+G +PI +TGGL+DTV++G TGF SV+ A+ + RA T+ LA M + M + W K+ Sbjct: 398 ADFLLMPSRFEPCGLSQMYAQRFGCLPIAHATGGLIDTVDDGVTGFLFQHASVE----------ALRRCLERAFRTFRLPGLLAAMRRAAMLRPSGWDVAGNKY 491
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA_RHOPB (Glycogen synthase OS=Rhodopseudomonas palustris (strain BisB18) GN=glgA PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.415e-13 Identity = 43/114 (37.72%), Postives = 64/114 (56.14%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMK-NGMAQDLSWKGPAKKWEETLLNLEVA 347 AD +L+PSRFEPCGL QL A+RYG VP+VA GGL DTV + + + PV ++ + + A Y +A + ++ NGM D+SW+ PA+ + + +L A Sbjct: 370 ADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLSDTVVDA-NEMAIAAGVATGVQFSPVTGDMLAAALSKTRALYADRAAWQALQHNGMTADVSWRNPAQHYAQLYRSLLAA 482
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA_RHILO (Glycogen synthase OS=Rhizobium loti GN=glgA PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.415e-13 Identity = 42/105 (40.00%), Postives = 59/105 (56.19%), Query Frame = 3 Query: 12 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEE 323 D I+IPSRFEPCGL QL+ +RYG VP+VA TGGL DT+ + + + P + A+ +RR + Y A E + + GM D+SW A+K+ E Sbjct: 367 DAIIIPSRFEPCGLTQLYGLRYGCVPVVARTGGLADTIIDANEAAMAAGVATGLQFA-PNNGGAMLHAIRRLVDAYADPAAFETIQRQGMKADVSWDKSAEKYLE 470
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA_ELUMP (Glycogen synthase OS=Elusimicrobium minutum (strain Pei191) GN=glgA PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.415e-13 Identity = 42/108 (38.89%), Postives = 65/108 (60.19%), Query Frame = 3 Query: 9 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGPAKKWEE 323 +D L+PSRFEPCGL Q+ +MRYGTVPIV+ GGL+DTV+ +G T + G F ++ + ++ AL Y + ++KNGM +D SW A+++++ Sbjct: 373 SDIFLMPSRFEPCGLSQMISMRYGTVPIVSRVGGLLDTVKGYDGITKYATGFFILE------FSETGIERSLDYALKYYQDKRCWGMLIKNGMEKDFSWTKSAQEYQD 474
BLAST of FC929817 vs. ExPASy Swiss-Prot
Match: GLGA_AGRRK (Glycogen synthase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=glgA PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.415e-13 Identity = 41/103 (39.81%), Postives = 59/103 (57.28%), Query Frame = 3 Query: 12 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKW 317 D I+IPSRFEPCGL QL+ +RYG VPIVA TGGL DT+ + + + PV + +RRA+ + + + +M K GM D+SW A+++ Sbjct: 367 DAIIIPSRFEPCGLTQLYGLRYGCVPIVARTGGLNDTIIDANHAALQAKVATGIQ-FSPVTAEGLLQAIRRAIYLFQDRKVWTQMQKQGMKSDVSWGKSAERY 468 The following BLAST results are available for this feature:
BLAST of FC929817 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 238
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929817 ID=FC929817; Name=FC929817; organism=Citrus clementina; type=EST; length=707bpback to top |