FC929840
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929840 vs. ExPASy Swiss-Prot
Match: HAOX2_MOUSE (Hydroxyacid oxidase 2 OS=Mus musculus GN=Hao2 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.950e-31 Identity = 84/189 (44.44%), Postives = 113/189 (59.79%), Query Frame = 1 Query: 97 LNEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEE-VAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTVDTPRLGRR----------EADIKNKMITPPLKNLEGL 630 L +F+ A+ L K +DF G A+D T +N+ AF RI RPR L DVS+ID TTI +I+API I+PTA H +A +GE +TA+AA N V+S +S T+E+ VAA+ + ++QLYV DI +VQR E GFKALV+TVD P LG R EA+IK K + P ++ GL Sbjct: 6 LADFKAQAQKQLSKTSWDFIEGEADDGITYNDNLAAFRRIRLRPRYLRDVSKIDTRTTIQGQEINAPICISPTAFHSIAWADGEKSTAKAAQKANICYVISSYASYTVEDIVAAAPGGLHWFQLYVQPDWDINKQMVQRIEALGFKALVVTVDAPVLGNRRGNKRSLLDLEANIKLKDLRSPGESKSGL 194
BLAST of FC929840 vs. ExPASy Swiss-Prot
Match: CYB2_YEAST (Cytochrome b2, mitochondrial OS=Saccharomyces cerevisiae GN=CYB2 PE=1 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.156e-30 Identity = 77/174 (44.25%), Postives = 103/174 (59.20%), Query Frame = 1 Query: 91 VNLNEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANP-EGEVATARAAASCNT-----IMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTVDTPRLGRREADIKNK 594 +NL +F+ LA L K + +Y+ GA DE T +EN A+HRI F+P+ILVDV ++D+ST +L + P ++ TAL KL NP EGE AR T I L+ S I E A S +++YQLYV R IT LV+ E+ G KAL +TVD P LG+RE D+K K Sbjct: 203 INLYDFEYLASQTLTKQAWAYYSSGANDEVTHRENHNAYHRIFFKPKILVDVRKVDISTDMLGSHVDVPFYVSATALCKLGNPLEGEKDVARGCGQGVTKVPQMISTLASCSPEEIIEAAPSDKQIQWYQLYVNSDRKITDDLVKNVEKLGVKALFVTVDAPSLGQREKDMKLK 376
BLAST of FC929840 vs. ExPASy Swiss-Prot
Match: MDLB_PSEPU ((S)-mandelate dehydrogenase OS=Pseudomonas putida GN=mdlB PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.231e-27 Identity = 68/177 (38.42%), Postives = 103/177 (58.19%), Query Frame = 1 Query: 76 MAAEPVNLNEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTVDTPRLGRREADIKNKMITP 606 M+ N+ ++++L + LPKM YD+ GGAEDE+ +K N + F + F+P+ LVDVSR L +L + S P++I PT L+ P+G++A ARAA VLS S+ +IE++A + ++QLYV R+I +V +A G+ LVLT D G RE D+ N+ P Sbjct: 1 MSQNLFNVEDYRKLRQKRLPKMVYDYLEGGAEDEYGVKHNRDVFQQWRFKPKRLVDVSRRSLQAEVLGKRQSMPLLIGPTGLNGALWPKGDLALARAATKAGIPFVLSTASNMSIEDLARQCDGDLWFQLYVI-HREIAQGMVLKALHTGYTTLVLTTDVAVNGYRERDLHNRFKIP 176
BLAST of FC929840 vs. ExPASy Swiss-Prot
Match: LLDD_AGRVS (L-lactate dehydrogenase [cytochrome] OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=lldD PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.309e-24 Identity = 61/168 (36.31%), Postives = 91/168 (54.17%), Query Frame = 1 Query: 103 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTVDTPRLGRREADIKNKMITP 606 +++E AR LP + + GGA EHT++ N++ + R R+L V +D+STT+ D +++ P+++AP L + GEV ARAA + LS S IEEV A+SN ++QLYV + R ++RA G + LV TVD P G R D + M P Sbjct: 8 DYREAARRRLPPFLFHYIDGGAYSEHTMRRNIDDLADLALRQRVLKSVGTVDISTTLFDEELAMPVVLAPVGLTGMYARRGEVQAARAAEKKGIPLTLSTVSVCPIEEVQAASNRPIWFQLYVLRDRGFMKNALERAWAAGIRKLVFTVDMPVPGARYRDAHSGMSGP 175
BLAST of FC929840 vs. ExPASy Swiss-Prot
Match: LLDD2_MYCTU (Putative L-lactate dehydrogenase [cytochrome] 2 OS=Mycobacterium tuberculosis GN=lldD2 PE=3 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 4.354e-23 Identity = 62/182 (34.07%), Postives = 98/182 (53.85%), Query Frame = 1 Query: 91 VNLNEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEE-VAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTVDTPRLGRREADIKNKMITPPLKNLEGLL 633 + + + + +A+ P+ +D+ GGAEDE ++ + F I F P IL DV+ + +L P IAPT +L + EGE+A ARAAA+ LS ++ IE+ V A +++QLY+++ RD + LV+R GF +++TVD P G R D++N M PP L +L Sbjct: 35 LTIQDLRRIAKRRTPRAAFDYADGGAEDELSIARARQGFRDIEFHPTILRDVTTVCAGWNVLGQPTVLPFGIAPTGFTRLMHTEGEIAGARAAAAAGIPFSLSTLATCAIEDLVIAVPQGRKWFQLYMWRDRDRSMALVRRVAAAGFDTMLVTVDVPVAGARLRDVRNGMSIPPALTLRTVL 216
BLAST of FC929840 vs. ExPASy Swiss-Prot
Match: LLDD_PSEU2 (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas syringae pv. syringae (strain B728a) GN=lldD PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.699e-23 Identity = 64/190 (33.68%), Postives = 99/190 (52.11%), Query Frame = 1 Query: 100 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTVDTPRLGRREADIKNKMITP---PLKNLEGLLSTEVSSDTG 660 ++++ A+ LP+ +D+ GGA EHTL+ N I+ R R+L +V + L T + ++ PII++P L + GEV ARAAA+ LS S +IEEVA+ S+ ++QLYV K R ++RA+ G LV TVD P G R D + M P P + L+ + + + + G Sbjct: 7 SDYRAAAKRKLPRFLFDYIDGGAYAEHTLRANGSDLADISLRQRVLKNVDNVSLETRLFGESLAMPIILSPVGLSGMYARRGEVQVARAAANKRIPFCLSTVSVCSIEEVASQSDQAIWFQLYVLKDRGFMKNALERAKAAGVTTLVFTVDMPTPGARYRDAHSGMSGPYAAPRRILQAMTKPDWALNVG 196
BLAST of FC929840 vs. ExPASy Swiss-Prot
Match: LLDD_PSEFS (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas fluorescens (strain SBW25) GN=lldD PE=3 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 1.654e-22 Identity = 60/169 (35.50%), Postives = 89/169 (52.66%), Query Frame = 1 Query: 100 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTVDTPRLGRREADIKNKMITP 606 ++++ A+ LP+ +D+ GGA EHT++ N I+ R RIL +V + L TT+ ++ P+I++P L + GEV A+AAA+ LS S IEEVA+ S ++QLYV K R ++RA+ G LV TVD P G R D + M P Sbjct: 7 SDYRAAAQRKLPRFLFDYIDGGAYAEHTMRANSSDLAEISLRQRILRNVDNLSLKTTVFGQELDMPVILSPVGLTGMYARRGEVQAAKAAANKGVPFCLSTVSVCPIEEVASQSARAIWFQLYVLKDRGFMRNALERAQAAGVTTLVFTVDMPTPGARYRDAHSGMSGP 175
BLAST of FC929840 vs. ExPASy Swiss-Prot
Match: LLDD_CAUSK (L-lactate dehydrogenase [cytochrome] OS=Caulobacter sp. (strain K31) GN=lldD PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.654e-22 Identity = 64/168 (38.10%), Postives = 89/168 (52.98%), Query Frame = 1 Query: 103 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTVDTPRLGRREADIKNKMITP 606 +F+E AR LP+ +D+ GGA E TL NV I+ R R+L DVSR+ TT+ + + P+ +AP L + GEV ARAAA+ LS S + EV+ +S+A ++QLY+ + R L+ RA G ALV TVD P G R D + M P Sbjct: 8 DFREAARRQLPRFLFDYIDGGAYAERTLARNVSDLADISLRQRVLKDVSRVSTRTTLFGVEQTLPVALAPVGLTGMYARRGEVQAARAAAAKGVPFCLSTVSVCDLAEVSRASSAPIWFQLYMLRDRGFMRDLLARAADAGATALVFTVDMPVPGARYRDAHSGMTGP 175
BLAST of FC929840 vs. ExPASy Swiss-Prot
Match: LLDD_CAUCR (L-lactate dehydrogenase [cytochrome] OS=Caulobacter crescentus GN=lldD PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.822e-22 Identity = 62/168 (36.90%), Postives = 88/168 (52.38%), Query Frame = 1 Query: 103 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTVDTPRLGRREADIKNKMITP 606 +F+E AR LP+ +D+ GGA E T+ N++ I R R+L+DVS +D STT+ + + P+ +AP L + GE ARAAA+ LS S ++EV A+S ++QLYV + R L+ RA G LV TVD P G R D + M P Sbjct: 8 DFREAARRRLPRFLFDYIDGGAYAERTMARNIDDLADIALRQRVLMDVSVVDPSTTLFGVRQALPVALAPVGLTGMYARRGECQAARAAAAKGVPFCLSTVSVCDVDEVRAASATPFWFQLYVLRDRGFMRDLLARASAAGATTLVFTVDMPVPGARYRDAHSGMSGP 175
BLAST of FC929840 vs. ExPASy Swiss-Prot
Match: LLDD_CAUCN (L-lactate dehydrogenase [cytochrome] OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=lldD PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.822e-22 Identity = 62/168 (36.90%), Postives = 88/168 (52.38%), Query Frame = 1 Query: 103 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTVDTPRLGRREADIKNKMITP 606 +F+E AR LP+ +D+ GGA E T+ N++ I R R+L+DVS +D STT+ + + P+ +AP L + GE ARAAA+ LS S ++EV A+S ++QLYV + R L+ RA G LV TVD P G R D + M P Sbjct: 8 DFREAARRRLPRFLFDYIDGGAYAERTMARNIDDLADIALRQRVLMDVSVVDPSTTLFGVRQALPVALAPVGLTGMYARRGECQAARAAAAKGVPFCLSTVSVCDVDEVRAASATPFWFQLYVLRDRGFMRDLLARASAAGATTLVFTVDMPVPGARYRDAHSGMSGP 175 The following BLAST results are available for this feature:
BLAST of FC929840 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 127
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929840 ID=FC929840; Name=FC929840; organism=Citrus clementina; type=EST; length=703bpback to top |