FC929840
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929840 vs. ExPASy Swiss-Prot
Match: LLDD_PSEPK (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas putida (strain KT2440) GN=lldD PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.814e-22 Identity = 67/189 (35.45%), Postives = 96/189 (50.79%), Query Frame = 1 Query: 103 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTVDTPRLGRREADIKNKMI--TPPLKN-LEGLLSTEVSSDTG 660 +++ A+ LP + + GGA EHTL+ NV I R R+L ++S + L T + D +S P+ +AP L + GEV ARAAA+ +S S IEEVA + N ++QLYV K R ++RA+ G K LV TVD P G R D + M PL+ L+ + E + D G Sbjct: 8 DYRAAAQRKLPPFLFHYADGGAYAEHTLRHNVSDLAGIALRQRVLNNMSELSLETKLFDETLSMPVALAPVGLTGMYARRGEVQAARAAAAHGIPFTMSTVSVCPIEEVAPAINRPMWFQLYVLKDRGFMRNALERAKAAGVKTLVFTVDMPVPGARYRDAHSGMSGKNGPLRRVLQAMTHPEWAWDVG 196
BLAST of FC929840 vs. ExPASy Swiss-Prot
Match: LLDD_PSEPG (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas putida (strain GB-1) GN=lldD PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.814e-22 Identity = 67/189 (35.45%), Postives = 97/189 (51.32%), Query Frame = 1 Query: 103 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTVDTPRLGRREADIKNKMI--TPPLKN-LEGLLSTEVSSDTG 660 +++ A+ LP + + GGA EHTL+ NV I R R+L ++S + LST + D +S P+ +AP L + GEV ARAAA+ +S S IEEVA + + ++QLYV K R ++RA+ G K LV TVD P G R D + M PL+ L+ + E + D G Sbjct: 8 DYRAAAQRKLPPFLFHYADGGAYAEHTLRHNVSDLASIALRQRVLNNMSELSLSTRLFDETLSMPVALAPVGLTGMYARRGEVQAARAAAAHGIPFTMSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMRNALERAKAAGVKTLVFTVDMPVPGARYRDAHSGMSGKNGPLRRVLQAMTHPEWAWDVG 196
BLAST of FC929840 vs. ExPASy Swiss-Prot
Match: LLDD_PSEP1 (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=lldD PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.814e-22 Identity = 67/189 (35.45%), Postives = 96/189 (50.79%), Query Frame = 1 Query: 103 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTVDTPRLGRREADIKNKMI--TPPLKN-LEGLLSTEVSSDTG 660 +++ A+ LP + + GGA EHTL+ NV I R R+L ++S + L T + D +S P+ +AP L + GEV ARAAA+ +S S IEEVA + N ++QLYV K R ++RA+ G K LV TVD P G R D + M PL+ L+ + E + D G Sbjct: 8 DYRAAAQRKLPPFLFHYADGGAYAEHTLRHNVSDLAGIALRQRVLNNMSELSLETKLFDETLSMPVALAPVGLTGMYARRGEVQAARAAAAHGIPFTMSTVSVCPIEEVAPAINRPMWFQLYVLKDRGFMRNALERAKAAGVKTLVFTVDMPVPGARYRDAHSGMSGKNGPLRRVLQAMTHPEWAWDVG 196
BLAST of FC929840 vs. ExPASy Swiss-Prot
Match: LLDD_ERWCT (L-lactate dehydrogenase [cytochrome] OS=Erwinia carotovora subsp. atroseptica GN=lldD PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.287e-22 Identity = 61/168 (36.31%), Postives = 87/168 (51.79%), Query Frame = 1 Query: 103 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTVDTPRLGRREADIKNKMITP 606 +++ A+ LP + + GGA EHTL+ N I R RIL ++S + L T + K++ P+++AP L + GEV ARAAA LS S IEEVA + + ++QLYV K R + ++RA+ G K LV TVD P G R D + M P Sbjct: 8 DYRAAAQRRLPPFLFHYIDGGAYGEHTLRRNTADLADIALRQRILKNMSDLSLETQLFGEKLAMPVVLAPVGLTGMYARRGEVQAARAAAQKGIPFTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMRSALERAQAAGVKTLVFTVDMPTPGARYRDAHSGMSGP 175
BLAST of FC929840 vs. ExPASy Swiss-Prot
Match: LLDD_XANP2 (L-lactate dehydrogenase [cytochrome] OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=lldD PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.211e-22 Identity = 62/169 (36.69%), Postives = 87/169 (51.48%), Query Frame = 1 Query: 100 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTVDTPRLGRREADIKNKMITP 606 ++++E AR LP + + GGA E TL+ NVE + R R+L V +DLSTT+L ++S P+ +AP L + GEV A+AA LS S +IEEV + ++QLYV K R ++RA G + LV TVD P G R D + M P Sbjct: 7 SDYREAARRRLPPFLFHYIDGGAYAEATLRRNVEDLSDLALRQRVLKSVGEVDLSTTLLKQQLSMPVGLAPVGLTGMYARRGEVQAAQAATQKGIPFTLSTVSVCSIEEVQSQVGKPIWFQLYVLKDRGFMKNALERAWAAGIRTLVFTVDMPVPGARYRDAHSGMSGP 175
BLAST of FC929840 vs. ExPASy Swiss-Prot
Match: LLDD_PSEMY (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas mendocina (strain ymp) GN=lldD PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.211e-22 Identity = 67/189 (35.45%), Postives = 97/189 (51.32%), Query Frame = 1 Query: 103 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTVDTPRLGRREADIKNKMITP--PLKN-LEGLLSTEVSSDTG 660 +++ A LP + + GGA EHTL+ NV I R R+L ++S +DLST + K+S P+ +AP L + GEV A+AAA+ LS S IEEVA + + ++QLYV K R ++RA+ G LV TVD P G R D + M P PL+ L+ + + + D G Sbjct: 8 DYRAAAERKLPPFLFHYADGGAYAEHTLRRNVADLSNIELRQRVLKNMSELDLSTELFGEKMSMPVGLAPVGLTGMYARRGEVQAAKAAAAKGIPFTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMRNALERAKAAGCSTLVFTVDMPVPGARYRDAHSGMSGPNGPLRRVLQAMTHPQWAWDVG 196
BLAST of FC929840 vs. ExPASy Swiss-Prot
Match: LLDD_PSEE4 (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas entomophila (strain L48) GN=lldD PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.211e-22 Identity = 63/175 (36.00%), Postives = 91/175 (52.00%), Query Frame = 1 Query: 103 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTVDTPRLGRREADIKNKMITP--PLKNL 621 +++ A+ LP + + GGA EHTL+ NV I R R+L ++S + L T + D +S P+ +AP L + GEV ARAAA+ +S S IEEVA + + ++QLYV K R ++RA+ G K LV TVD P G R D + M P PL+ + Sbjct: 8 DYRAAAQRKLPPFLFHYADGGAYAEHTLRHNVSDLASIALRQRVLKNMSDLSLETRLFDETLSMPVALAPVGLTGMYARRGEVQAARAAAAHGIPFTMSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMRNALERAKAAGVKTLVFTVDMPVPGARYRDAHSGMSGPNAPLRRV 182
BLAST of FC929840 vs. ExPASy Swiss-Prot
Match: LLDD_SERP5 (L-lactate dehydrogenase [cytochrome] OS=Serratia proteamaculans (strain 568) GN=lldD PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.401e-21 Identity = 61/168 (36.31%), Postives = 87/168 (51.79%), Query Frame = 1 Query: 103 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTVDTPRLGRREADIKNKMITP 606 +++ A+ LP + + GGA EHTL+ N E I R RIL ++S + L T++ K++ P+I+ P L + GEV A+AAA LS S IEEVA + + ++QLYV K R ++RA+ G K LV TVD P G R D + M P Sbjct: 8 DYRAAAQAKLPPFLFHYIDGGAYAEHTLRRNTEDLAGIALRQRILRNMSDLSLETSLFGEKLAMPVILGPVGLTGMYARRGEVQAAKAAAQKGIPFTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMRNALERAKAAGVKTLVFTVDMPVPGARYRDAHSGMSGP 175
BLAST of FC929840 vs. ExPASy Swiss-Prot
Match: LLDD_PSEPW (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas putida (strain W619) GN=lldD PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.401e-21 Identity = 65/189 (34.39%), Postives = 95/189 (50.26%), Query Frame = 1 Query: 103 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTVDTPRLGRREADIKNKMI---TPPLKNLEGLLSTEVSSDTG 660 +++ A+ LP + + GGA EHTL+ NV I R R+L ++S + L T + D +S P+ +AP L + GEV ARAAA+ +S S IEEVA + + ++QLYV K R ++RA+ G K LV TVD P G R D + M P + L+ + E + D G Sbjct: 8 DYRAAAQRKLPPFLFHYADGGAYAEHTLRHNVSDLAGIALRQRVLKNMSELSLETRLFDETLSMPVALAPVGLTGMYARRGEVQAARAAAAHGIPFTMSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMRNALERAKAAGVKTLVFTVDMPVPGARYRDAHSGMSGANGPMRRVLQAMTHPEWAWDVG 196
BLAST of FC929840 vs. ExPASy Swiss-Prot
Match: LLDD_PSEAE (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas aeruginosa GN=lldD PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.829e-21 Identity = 64/189 (33.86%), Postives = 95/189 (50.26%), Query Frame = 1 Query: 103 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTVDTPRLGRREADIKNKMITP---PLKNLEGLLSTEVSSDTG 660 +++ A+ LP + + GGA E+TL+ NVE I R R+L ++S + L T + D ++ P+ +AP L + GEV ARAAA+ LS S IEEVA + + ++QLYV K R ++RA+ G LV TVD P G R D + M P P + L+ + + D G Sbjct: 8 DYRAAAQRKLPPFLFHYIDGGAYAEYTLRRNVEDLSAIALRQRVLKNMSELSLETRLFDETLAMPVALAPVGLTGMYARRGEVQAARAAAAKGVPFTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMRNALERAKAAGVTTLVFTVDMPVPGARYRDAHSGMSGPYAAPRRILQAMTHPAWAWDVG 196 The following BLAST results are available for this feature:
BLAST of FC929840 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 127
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929840 ID=FC929840; Name=FC929840; organism=Citrus clementina; type=EST; length=703bpback to top |