FC929840
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929840 vs. ExPASy Swiss-Prot
Match: LLDD_ECO55 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli (strain 55989 / EAEC) GN=lldD PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.120e-21 Identity = 59/169 (34.91%), Postives = 88/169 (52.07%), Query Frame = 1 Query: 100 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTVDTPRLGRREADIKNKMITP 606 ++++ A+ LP + + GGA E+TL+ NVE + R RIL ++S + L TT+ + K+S P+ +AP L + GEV A+AA + LS S IEEVA + ++QLYV + R ++RA+ G LV TVD P G R D + M P Sbjct: 7 SDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGP 175
BLAST of FC929840 vs. ExPASy Swiss-Prot
Match: LLDD_ECO24 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=lldD PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.120e-21 Identity = 59/169 (34.91%), Postives = 88/169 (52.07%), Query Frame = 1 Query: 100 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTVDTPRLGRREADIKNKMITP 606 ++++ A+ LP + + GGA E+TL+ NVE + R RIL ++S + L TT+ + K+S P+ +AP L + GEV A+AA + LS S IEEVA + ++QLYV + R ++RA+ G LV TVD P G R D + M P Sbjct: 7 SDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGP 175
BLAST of FC929840 vs. ExPASy Swiss-Prot
Match: LLDD_CHRSD (L-lactate dehydrogenase [cytochrome] OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=lldD PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.120e-21 Identity = 60/165 (36.36%), Postives = 86/165 (52.12%), Query Frame = 1 Query: 103 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTVDTPRLGRREADIKNKM 597 +++ A+ LP + + GGA EHTL+ NVE I R R+L D+S + L T + ++ P+ +AP L + GEV ARAAAS LS S I EVA++ ++QLYV + R +++RA+ G K LV TVD P G R D + M Sbjct: 8 DYRHAAKRRLPPFLFHYADGGAYAEHTLRRNVEDLAGIALRQRVLKDMSHLSLETELFGEPLAMPVALAPVGLAGMYARRGEVQAARAAASKGIPFTLSTVSVCPIAEVASAIERPLWFQLYVLRDRGFMKHVLERAKAAGVKTLVFTVDMPVPGARYRDAHSGM 172
BLAST of FC929840 vs. ExPASy Swiss-Prot
Match: LLDD_XANCB (L-lactate dehydrogenase [cytochrome] OS=Xanthomonas campestris pv. campestris (strain B100) GN=lldD PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.322e-21 Identity = 62/176 (35.23%), Postives = 90/176 (51.14%), Query Frame = 1 Query: 100 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTVDTPRLGRREADIKNKMITP--PLKNL 621 ++++ A LP + + GGA EHTL+ NV I R R+L ++S + LST + ++ P+ +AP L + GEV ARAAA+ LS S IEEVA + + ++QLYV K R ++RA+ G LV TVD P G R D + M P PL+ + Sbjct: 7 SDYRAAAEARLPPFLFHYMDGGAYAEHTLRRNVSDLADIALRQRVLRNMSDLSLSTELFGETLAMPVALAPVGLTGMYARRGEVQAARAAAARGIPFTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMRNALERAKAAGVTTLVFTVDMPTPGARYRDAHSGMSGPNAPLRRM 182
BLAST of FC929840 vs. ExPASy Swiss-Prot
Match: LLDD_VIBCM (L-lactate dehydrogenase [cytochrome] OS=Vibrio cholerae serotype O1 (strain M66-2) GN=lldD PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.322e-21 Identity = 59/168 (35.12%), Postives = 88/168 (52.38%), Query Frame = 1 Query: 103 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTVDTPRLGRREADIKNKMITP 606 +++ A+ LP + + GG+ EHTL+ N + I R R+L D+S + L T + K++ PI ++P L + GEV A+AA + LS S IEEVA S + ++QLYV K R +++RA+ G K LV TVD P G R D+ + M P Sbjct: 8 DYRAAAKAKLPPFLFHYIDGGSYGEHTLRRNTDDLADIALRQRVLSDMSELSLETELFGEKMALPIALSPVGLTGMYARRGEVQAAQAAEAKGIPFTLSTVSVCPIEEVAPSIHRPIWFQLYVLKDRGFMKNVLERAKAAGVKNLVFTVDMPVPGARYRDMHSGMSGP 175
BLAST of FC929840 vs. ExPASy Swiss-Prot
Match: LLDD_VIBCH (L-lactate dehydrogenase [cytochrome] OS=Vibrio cholerae GN=lldD PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.322e-21 Identity = 59/168 (35.12%), Postives = 88/168 (52.38%), Query Frame = 1 Query: 103 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTVDTPRLGRREADIKNKMITP 606 +++ A+ LP + + GG+ EHTL+ N + I R R+L D+S + L T + K++ PI ++P L + GEV A+AA + LS S IEEVA S + ++QLYV K R +++RA+ G K LV TVD P G R D+ + M P Sbjct: 8 DYRAAAKAKLPPFLFHYIDGGSYGEHTLRRNTDDLADIALRQRVLSDMSELSLETELFGEKMALPIALSPVGLTGMYARRGEVQAAQAAEAKGIPFTLSTVSVCPIEEVAPSIHRPIWFQLYVLKDRGFMKNVLERAKAAGVKNLVFTVDMPVPGARYRDMHSGMSGP 175
BLAST of FC929840 vs. ExPASy Swiss-Prot
Match: LLDD_ENTS8 (L-lactate dehydrogenase [cytochrome] OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=lldD PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.322e-21 Identity = 58/166 (34.94%), Postives = 87/166 (52.41%), Query Frame = 1 Query: 100 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTVDTPRLGRREADIKNKM 597 ++++ A+ LP + + GGA E+TLK NVE ++ R R+L ++S + L TT+ + +S P+ + P L + GEV ARAA++ LS S IEEVA N ++QLYV + R ++RA+ G LV TVD P G R D + M Sbjct: 7 SDYRAAAQRILPPFLFHYIDGGAYAEYTLKRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALGPVGLCGMYARRGEVQAARAASAKGIPFTLSTVSVCPIEEVAPVMNRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGM 172
BLAST of FC929840 vs. ExPASy Swiss-Prot
Match: LLDD_ALCFA (L-lactate dehydrogenase [cytochrome] OS=Alcaligenes faecalis GN=lldD PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.322e-21 Identity = 58/168 (34.52%), Postives = 86/168 (51.19%), Query Frame = 1 Query: 103 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTVDTPRLGRREADIKNKMITP 606 +++ A+ LP + + GGA EHTL+ NV+ + R R+L D+S++D S + K+S P+ ++P L + GEV ARAA + +S S IEEVA + ++QLYV K R ++RA+ G LV TVD P G R D + M P Sbjct: 8 DYRRAAQKRLPPFLFHYIDGGAYAEHTLRRNVDDLAEVALRQRVLKDMSQLDTSIDLFGEKLSMPVALSPVGLTGMYARRGEVQAARAADARGIPFTMSSVSVCPIEEVAPRLSRPMWFQLYVLKDRGFMRNALERAQAAGCSTLVFTVDMPVPGARYRDAHSGMSGP 175
BLAST of FC929840 vs. ExPASy Swiss-Prot
Match: LLDD_ACIBY (L-lactate dehydrogenase [cytochrome] OS=Acinetobacter baumannii (strain AYE) GN=lldD PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.951e-21 Identity = 60/169 (35.50%), Postives = 85/169 (50.30%), Query Frame = 1 Query: 100 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTVDTPRLGRREADIKNKMITP 606 N+++ A+ LP + + GGA E+TLK NV+ I R R+L D+S + L T + + +S P+ +AP L + GEV A AA LS S IEEVA + N ++QLYV + R ++RA+ G LV TVD P G R D + M P Sbjct: 7 NDYRAAAQRRLPPFLFHYIDGGAYAEYTLKRNVQDLSEIALRQRVLNDMSALSLETKLFNETLSMPVALAPVGLTGMYARRGEVQAAMAADKKGIPFTLSTVSVCPIEEVAPAINRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPVPGARYRDAHSGMSGP 175
BLAST of FC929840 vs. ExPASy Swiss-Prot
Match: LLDD_ACIBT (L-lactate dehydrogenase [cytochrome] OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=lldD PE=3 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 6.951e-21 Identity = 60/169 (35.50%), Postives = 85/169 (50.30%), Query Frame = 1 Query: 100 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTVDTPRLGRREADIKNKMITP 606 N+++ A+ LP + + GGA E+TLK NV+ I R R+L D+S + L T + + +S P+ +AP L + GEV A AA LS S IEEVA + N ++QLYV + R ++RA+ G LV TVD P G R D + M P Sbjct: 7 NDYRAAAQRRLPPFLFHYIDGGAYAEYTLKRNVQDLSEIALRQRVLNDMSALSLETKLFNETLSMPVALAPVGLTGMYARRGEVQAAMAADKKGIPFTLSTVSVCPIEEVAPAINRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPVPGARYRDAHSGMSGP 175 The following BLAST results are available for this feature:
BLAST of FC929840 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 127
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929840 ID=FC929840; Name=FC929840; organism=Citrus clementina; type=EST; length=703bpback to top |