FC929840
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929840 vs. ExPASy Swiss-Prot
Match: LLDD_ECO81 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O81 (strain ED1a) GN=lldD PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.078e-21 Identity = 58/169 (34.32%), Postives = 87/169 (51.48%), Query Frame = 1 Query: 100 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTVDTPRLGRREADIKNKMITP 606 ++++ A+ LP + + GGA E+TL+ NVE + R RIL ++S + L TT+ + K+S P+ + P L + GEV A+AA + LS S IEEVA + ++QLYV + R ++RA+ G LV TVD P G R D + M P Sbjct: 7 SDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALGPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGP 175
BLAST of FC929840 vs. ExPASy Swiss-Prot
Match: LLDD_ECO7I (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=lldD PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.078e-21 Identity = 58/169 (34.32%), Postives = 87/169 (51.48%), Query Frame = 1 Query: 100 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTVDTPRLGRREADIKNKMITP 606 ++++ A+ LP + + GGA E+TL+ NVE + R RIL ++S + L TT+ + K+S P+ + P L + GEV A+AA + LS S IEEVA + ++QLYV + R ++RA+ G LV TVD P G R D + M P Sbjct: 7 SDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALGPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGP 175
BLAST of FC929840 vs. ExPASy Swiss-Prot
Match: LLDD_ECO45 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=lldD PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.078e-21 Identity = 58/169 (34.32%), Postives = 87/169 (51.48%), Query Frame = 1 Query: 100 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTVDTPRLGRREADIKNKMITP 606 ++++ A+ LP + + GGA E+TL+ NVE + R RIL ++S + L TT+ + K+S P+ + P L + GEV A+AA + LS S IEEVA + ++QLYV + R ++RA+ G LV TVD P G R D + M P Sbjct: 7 SDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALGPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGP 175
BLAST of FC929840 vs. ExPASy Swiss-Prot
Match: LLDD_ESCF3 (L-lactate dehydrogenase [cytochrome] OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=lldD PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.549e-20 Identity = 58/169 (34.32%), Postives = 88/169 (52.07%), Query Frame = 1 Query: 100 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTVDTPRLGRREADIKNKMITP 606 ++++ A+ LP + + GGA E+TL+ NVE ++ R R+L ++S + L TT+ + K+S P+ +AP L + GEV A AA + LS S IEEVA + ++QLYV + R ++RA+ G LV TVD P G R D + M P Sbjct: 7 SDYRAAAQRILPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAGAADAHGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGP 175
BLAST of FC929840 vs. ExPASy Swiss-Prot
Match: LLDD_CITK8 (L-lactate dehydrogenase [cytochrome] OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=lldD PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.549e-20 Identity = 58/169 (34.32%), Postives = 87/169 (51.48%), Query Frame = 1 Query: 100 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTVDTPRLGRREADIKNKMITP 606 ++++ A+ LP + + GGA E+TL+ NVE + R R+L ++S + L TT+ + K+S P+ +AP L + GEV A AA + LS S IEEVA + ++QLYV + R ++RA+ G LV TVD P G R D + M P Sbjct: 7 SDYRAAAQRILPPFLFHYIDGGAYAEYTLRRNVEDLSEVALRQRVLKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGP 175
BLAST of FC929840 vs. ExPASy Swiss-Prot
Match: LLDD1_MYCTU (Putative L-lactate dehydrogenase [cytochrome] 1 OS=Mycobacterium tuberculosis GN=lldD1 PE=3 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 1.549e-20 Identity = 60/148 (40.54%), Postives = 87/148 (58.78%), Query Frame = 1 Query: 109 QELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTVD 552 Q+ A+ LPK Y +E T+ +NV AF + F P ++ + DLSTT++ ++S P+II+PT + + +P GEVA ARAAA+ T+M LS +S IEEV A +N F+Q+Y RD A V+RA + G LV+T D Sbjct: 13 QQRAKRRLPKSVYSSLIAASEKGITVADNVAAFSELGFAPHVIGATDKRDLSTTVMGQEVSLPVIISPTGV-QAVDPGGEVAVARAAAARGTVMGLSSFASKPIEEVIA-ANPKTFFQVYWQGGRDALAERVERARQAGAVGLVVTTD 158
BLAST of FC929840 vs. ExPASy Swiss-Prot
Match: LLDD_XANC5 (L-lactate dehydrogenase [cytochrome] OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=lldD PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.022e-20 Identity = 59/169 (34.91%), Postives = 86/169 (50.89%), Query Frame = 1 Query: 100 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTVDTPRLGRREADIKNKMITP 606 ++++ A+ LP + + GGA EHTL+ NV + R R+L ++S + LST + ++ P+ +AP L + GEV ARAAA+ LS S IEEVA + ++QLYV K R ++RA+ G LV TVD P G R D + M P Sbjct: 7 SDYRAAAQARLPPFLFHYIDGGAYAEHTLRRNVSDLADVALRQRVLRNMSDLRLSTELFGETLAMPVALAPVGLTGMYARRGEVQAARAAAARGIPFTLSTVSVCPIEEVAPAIERPMWFQLYVLKDRGFMRNALERAKAAGVTTLVFTVDMPTPGARYRDAHSGMSGP 175
BLAST of FC929840 vs. ExPASy Swiss-Prot
Match: LLDD_ECO27 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=lldD PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.022e-20 Identity = 58/169 (34.32%), Postives = 86/169 (50.89%), Query Frame = 1 Query: 100 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTVDTPRLGRREADIKNKMITP 606 ++++ A+ LP + + GGA E+TL NVE + R RIL ++S + L TT+ + K+S P+ + P L + GEV A+AA + LS S IEEVA + ++QLYV + R ++RA+ G LV TVD P G R D + M P Sbjct: 7 SDYRAAAQRILPPFLFHYMDGGAYSEYTLHRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALGPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGP 175
BLAST of FC929840 vs. ExPASy Swiss-Prot
Match: LLDD_XANAC (L-lactate dehydrogenase [cytochrome] OS=Xanthomonas axonopodis pv. citri GN=lldD PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.641e-20 Identity = 59/169 (34.91%), Postives = 85/169 (50.30%), Query Frame = 1 Query: 100 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTVDTPRLGRREADIKNKMITP 606 ++++ A LP + + GGA EHTL+ NV + R R+L ++S + LST + ++ P+ +AP L + GEV ARAAA+ LS S IEEVA + ++QLYV K R ++RA+ G LV TVD P G R D + M P Sbjct: 7 SDYRAAAEARLPPFLFHYIDGGAYAEHTLRRNVSDLADVALRQRVLRNMSDLRLSTELFGETLAMPVALAPVGLTGMYARRGEVQAARAAAARGIPFTLSTVSVCPIEEVAPAIERPMWFQLYVLKDRGFMRNALERAKAAGVTTLVFTVDMPTPGARYRDAHSGMSGP 175
BLAST of FC929840 vs. ExPASy Swiss-Prot
Match: LLDD_VIBPA (L-lactate dehydrogenase [cytochrome] OS=Vibrio parahaemolyticus GN=lldD PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.450e-20 Identity = 57/168 (33.93%), Postives = 85/168 (50.60%), Query Frame = 1 Query: 103 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTVDTPRLGRREADIKNKMITP 606 +++ A+ LP + + GG+ DE TLK N + + R R+L D++ + L T I K++ PI +AP L + GEV A+AA +S S IEEVA + ++QLYV K R +++RA+ G LV TVD P G R D+ + M P Sbjct: 8 DYRAAAKAKLPPFLFHYIDGGSYDERTLKRNTDDLGDVALRQRVLRDMTDLSLETEIFGEKLAMPIALAPVGLTGMYARRGEVQAAKAAEKKGIPFTMSTVSVCPIEEVAPAIERPMWFQLYVLKDRGFMKNVLERAKAAGVTTLVFTVDMPVPGARYRDMHSGMSGP 175 The following BLAST results are available for this feature:
BLAST of FC929840 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 127
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929840 ID=FC929840; Name=FC929840; organism=Citrus clementina; type=EST; length=703bpback to top |