FC929841

Overview
NameFC929841
Unique NameFC929841
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15053 contig Ccv1_Contig15053:1..710. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929841 vs. ExPASy Swiss-Prot
Match: LGUL_PSEPU (Lactoylglutathione lyase OS=Pseudomonas putida GN=gloA PE=1 SV=3)

HSP 1 Score: 171.785 bits (434), Expect = 3.259e-42
Identity = 85/159 (53.46%), Postives = 104/159 (65.41%), Query Frame = 3
Query:  135 PGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKMKGVAFIKDPDDYWIEI 611
            PG+    D AT  +    TM R+KD + SLDFY+RVLG  L+ + DF E KFSLYFL   D A+ PAD   R  W    P  +ELTHN GTE D DF  YH+GN++PRGFGHI ++V DV  ACERFE L V F K+   G+M  +AFIKDPD YW+E+
Sbjct:   10 PGVTAQADPATAQFVFNHTMLRVKDIEKSLDFYTRVLGFKLVDKRDFVEAKFSLYFLALVDPATIPADDDARHQWMKSIPGVLELTHNHGTERDADF-AYHHGNTDPRGFGHICVSVPDVVAACERFEALQVPFQKRLSDGRMNHLAFIKDPDGYWVEV 167          
BLAST of FC929841 vs. ExPASy Swiss-Prot
Match: LGUL_YEAST (Lactoylglutathione lyase OS=Saccharomyces cerevisiae GN=GLO1 PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.678e-30
Identity = 71/150 (47.33%), Postives = 95/150 (63.33%), Query Frame = 3
Query:  171 GYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFE-RLG--VEFAKKPDGGKMKGVAFIKDPDDYWIEI 611
            G     TM RIK+P  SL+FY  VLGM LL+  +    KF+LYFLGY          V +T   F   + +ELTHNWGTE+DP+F  YHNGNSEP+G+GHI I+ DD    C+  E + G  ++++ K + G+MK +AF+KDPD Y IE+
Sbjct:  180 GNKFNHTMIRIKNPTRSLEFYQNVLGMKLLRTSEHESAKFTLYFLGY---------GVPKTDSVFSCESVLELTHNWGTENDPNFH-YHNGNSEPQGYGHICISCDDAGALCKEIEVKYGDKIQWSPKFNQGRMKNIAFLKDPDGYSIEV 319          

HSP 2 Score: 130.568 bits (327), Expect = 8.327e-30
Identity = 69/157 (43.95%), Postives = 89/157 (56.69%), Query Frame = 3
Query:  180 MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVW----TFGKPATIELTHNWGTESDPDFKGYHNGNSEP-RGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKMKGVAFIKDPDDYWIEIFDLKTIGK 635
            +  T  R+KDP  ++ FY+   GM LL R DF E KFSLYFL +      P D + +        F     +ELTHNWGTE +PD+K  +NGN EP RGFGHI  +V D+ K CE  E  GV+F K+   G+ K +AF   PD YWIE+      G+
Sbjct:   23 LNHTCLRVKDPARTVKFYTEHFGMKLLSRKDFEEAKFSLYFLSF------PKDDIPKNKNGEPDVFSAHGVLELTHNWGTEKNPDYK-INNGNEEPHRGFGHICFSVSDINKTCEELESQGVKFKKRLSEGRQKDIAFALGPDGYWIELITYSREGQ 172          
BLAST of FC929841 vs. ExPASy Swiss-Prot
Match: LGUL_SCHPO (Lactoylglutathione lyase OS=Schizosaccharomyces pombe GN=glo1 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.962e-27
Identity = 67/180 (37.22%), Postives = 103/180 (57.22%), Query Frame = 3
Query:   87 LLSMASSEPKESPANNPGLHTARDEATNGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGN-SEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKMKGVAFIKDPDDYWIEIFDLK 623
            L+S + ++PK + +N              +    TM R+KDP+ S+ FY + LGM ++ + D P  KF+ YFL Y      P+D     +    +   +ELTHNWGTE +     YHNGN  + +G+GH+ I+VD++  AC +FE  G+ F KK   G+MK +AF+ DPD+YW+E+ + K
Sbjct:  150 LVSQSETKPKANISN--------------FRFNHTMVRVKDPEPSIAFYEK-LGMKVIDKADHPNGKFTNYFLAY------PSD-----LPRHDREGLLELTHNWGTEKESG-PVYHNGNDGDEKGYGHVCISVDNINAACSKFEAEGLPFKKKLTDGRMKDIAFLLDPDNYWVEVIEQK 302          

HSP 2 Score: 115.546 bits (288), Expect = 2.772e-25
Identity = 68/147 (46.26%), Postives = 88/147 (59.86%), Query Frame = 3
Query:  174 YFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEP-RGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKMKGVAFIKDPDDYWIEI 611
            Y +  TM R+KD   SL FY+ V GM L+ +  F E +FSL FL + D   A    V+R+     +   +ELT+N+GTE   +   Y NGN+EP RGFGHI  TVD++  AC   E  GV F KK   GKMK +AF  DPD+YWIE+
Sbjct:   10 YKLNHTMIRVKDLDKSLKFYTEVFGMKLIDQWVFEENEFSLSFLAF-DGPGALNHGVERSK----REGILELTYNFGTEKK-EGPVYINGNTEPKRGFGHICFTVDNIESACAYLESKGVSFKKKLSDGKMKHIAFALDPDNYWIEL 150          
BLAST of FC929841 vs. ExPASy Swiss-Prot
Match: LGUL_NEIMB (Lactoylglutathione lyase OS=Neisseria meningitidis serogroup B GN=gloA PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.142e-21
Identity = 63/150 (42.00%), Postives = 83/150 (55.33%), Query Frame = 3
Query:  189 TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKMKG----VAFIKDPDDYWIEIFDLKT 626
            TM R+ + + SLDFY  VLGM LL+R D+PE +F+L F+GY        D  D TV        +ELTHNW TE       Y  GN+    +GHI + VDD Y+ACER +R G    +  + G MK     +AF++DPD Y IE    K+
Sbjct:    6 TMLRVGNLEKSLDFYQNVLGMKLLRRKDYPEGRFTLAFVGY-------GDETDSTV--------LELTHNWDTER------YDLGNA----YGHIAVEVDDAYEACERVKRQGGNVVR--EAGPMKHGTTVIAFVEDPDGYKIEFIQKKS 128          
BLAST of FC929841 vs. ExPASy Swiss-Prot
Match: LGUL_NEIMA (Lactoylglutathione lyase OS=Neisseria meningitidis serogroup A GN=gloA PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.142e-21
Identity = 63/150 (42.00%), Postives = 83/150 (55.33%), Query Frame = 3
Query:  189 TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKMKG----VAFIKDPDDYWIEIFDLKT 626
            TM R+ + + SLDFY  VLGM LL+R D+PE +F+L F+GY        D  D TV        +ELTHNW TE       Y  GN+    +GHI + VDD Y+ACER +R G    +  + G MK     +AF++DPD Y IE    K+
Sbjct:    6 TMLRVGNLEKSLDFYQNVLGMKLLRRKDYPEGRFTLAFVGY-------GDETDSTV--------LELTHNWDTER------YDLGNA----YGHIAVEVDDAYEACERVKRQGGNVVR--EAGPMKHGTTVIAFVEDPDGYKIEFIQKKS 128          
BLAST of FC929841 vs. ExPASy Swiss-Prot
Match: LGUL_SYNY3 (Probable lactoylglutathione lyase OS=Synechocystis sp. (strain PCC 6803) GN=gloA PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.064e-19
Identity = 56/149 (37.58%), Postives = 81/149 (54.36%), Query Frame = 3
Query:  177 FMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKMKG----VAFIKDPDDYWIEI 611
            F+  TM R+ D   SL FY  +LGM+LL++ D+P  +F+L F+GY   +               + A IELTHNWGT+       Y  GN    GFGHI + V+D+Y  C++    G +  ++P  G MK     +AF++DPD Y IE+
Sbjct:    2 FLLHTMIRVGDLDKSLQFYCDILGMNLLRKKDYPSGEFTLAFVGYGKES---------------ENAVIELTHNWGTDK------YDLGN----GFGHIALGVEDIYSTCDKIRDKGGKVVREP--GPMKHGTTVIAFVEDPDGYKIEL 123          
BLAST of FC929841 vs. ExPASy Swiss-Prot
Match: LGUL_VIBCH (Probable lactoylglutathione lyase OS=Vibrio cholerae GN=gloA PE=3 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.473e-18
Identity = 56/149 (37.58%), Postives = 80/149 (53.69%), Query Frame = 3
Query:  189 TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKMKG----VAFIKDPDDYWIEIFDLK 623
            TM R+ D   S++FY++V+GMSLL++ +  E K++L FLGY D +                 A IELT+NWG         Y  GN+    +GHI I VDD+Y  C+  +  G    ++P  G +KG    +AF+KDPD Y IE+   K
Sbjct:    9 TMLRVGDLDKSIEFYTQVMGMSLLRKNENTEYKYTLAFLGYGDESQG---------------AVIELTYNWGVAD------YEKGNA----YGHIAIGVDDIYATCDTIKAAGGIVTREP--GPVKGGTTHIAFVKDPDGYMIELIQNK 130          
BLAST of FC929841 vs. ExPASy Swiss-Prot
Match: LGUL_SALTY (Lactoylglutathione lyase OS=Salmonella typhimurium GN=gloA PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.513e-18
Identity = 57/153 (37.25%), Postives = 83/153 (54.25%), Query Frame = 3
Query:  189 TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKMKG----VAFIKDPDDYWIEIFDLKTIGK 635
            TM R+ D + S+ FY+ VLGM LL+  + PE K+SL F+GY                   + A IELT+NWG ES      Y  GN+    +GHI ++VD+  +ACER  + G    +  + G +KG    +AF++DPD Y IE+ + K  G+
Sbjct:    6 TMLRVGDLQRSIAFYTNVLGMKLLRTSENPEYKYSLAFVGYGPET---------------EEAVIELTYNWGVES------YDMGNA----YGHIALSVDNAAEACERIRQNGGNVTR--EAGPVKGGSTIIAFVEDPDGYKIELIEAKDAGR 131          
BLAST of FC929841 vs. ExPASy Swiss-Prot
Match: LGUL_SALTI (Lactoylglutathione lyase OS=Salmonella typhi GN=gloA PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.513e-18
Identity = 57/153 (37.25%), Postives = 83/153 (54.25%), Query Frame = 3
Query:  189 TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKMKG----VAFIKDPDDYWIEIFDLKTIGK 635
            TM R+ D + S+ FY+ VLGM LL+  + PE K+SL F+GY                   + A IELT+NWG ES      Y  GN+    +GHI ++VD+  +ACER  + G    +  + G +KG    +AF++DPD Y IE+ + K  G+
Sbjct:    6 TMLRVGDLQRSIAFYTNVLGMKLLRTSENPEYKYSLAFVGYGPET---------------EEAVIELTYNWGVES------YDMGNA----YGHIALSVDNAAEACERIRQNGGNVTR--EAGPVKGGSTIIAFVEDPDGYKIELIEAKDAGR 131          
BLAST of FC929841 vs. ExPASy Swiss-Prot
Match: LGUL_HAEIN (Lactoylglutathione lyase OS=Haemophilus influenzae GN=gloA PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.287e-18
Identity = 58/150 (38.67%), Postives = 78/150 (52.00%), Query Frame = 3
Query:  189 TMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFERLGVEFAKKPDGGKMKG----VAFIKDPDDYWIEIFDLKT 626
            TM R+ D   S+ FY  VLGM LL+  + PE K++L FLGYED  SA               A IELT+NWG +       Y +G +    +GHI I VDD+Y  CE     G    +  + G +KG    +AF++DPD Y IE  + K+
Sbjct:    6 TMLRVGDLDRSIKFYQDVLGMRLLRTSENPEYKYTLAFLGYEDGESA---------------AEIELTYNWGVDK------YEHGTA----YGHIAIGVDDIYATCEAVRASGGNVTR--EAGPVKGGSTVIAFVEDPDGYKIEFIENKS 128          
The following BLAST results are available for this feature:
BLAST of FC929841 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
LGUL_PSEPU3.259e-4253.46Lactoylglutathione lyase OS=Pseudomonas putida GN=... [more]
LGUL_YEAST1.678e-3047.33Lactoylglutathione lyase OS=Saccharomyces cerevisi... [more]
LGUL_SCHPO2.962e-2737.22Lactoylglutathione lyase OS=Schizosaccharomyces po... [more]
LGUL_NEIMB4.142e-2142.00Lactoylglutathione lyase OS=Neisseria meningitidis... [more]
LGUL_NEIMA4.142e-2142.00Lactoylglutathione lyase OS=Neisseria meningitidis... [more]
LGUL_SYNY35.064e-1937.58Probable lactoylglutathione lyase OS=Synechocystis... [more]
LGUL_VIBCH1.473e-1837.58Probable lactoylglutathione lyase OS=Vibrio choler... [more]
LGUL_SALTY2.513e-1837.25Lactoylglutathione lyase OS=Salmonella typhimurium... [more]
LGUL_SALTI2.513e-1837.25Lactoylglutathione lyase OS=Salmonella typhi GN=gl... [more]
LGUL_HAEIN4.287e-1838.67Lactoylglutathione lyase OS=Haemophilus influenzae... [more]

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Properties
Property NameValue
Genbank descriptionC34001A02EF PostHarvC1 Citrus clementina cDNA clone C34001A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929841 ID=FC929841; Name=FC929841; organism=Citrus clementina; type=EST; length=710bp
GAGAGCCACCATAAAAACTTGGTCACCCCCTCGGATTTGACTTTACTCGC
TACTCACAACGGTCAAAGGCTTCGAATCGATTTCGGTTGCTTTCAATGGC
TTCCTCGGAGCCCAAAGAATCCCCCGCTAACAATCCGGGTCTTCACACCG
CCCGTGATGAAGCTACCAACGGATACTTCATGCAACAAACGATGTTTCGA
ATTAAGGACCCCAAAGTTAGTCTTGATTTCTATTCTCGTGTGTTGGGCAT
GTCGCTACTAAAGAGGTTGGATTTTCCAGAAATGAAATTTAGCCTATACT
TTTTGGGCTATGAGGATACTGCATCAGCTCCAGCTGACCCTGTTGATAGA
ACTGTTTGGACTTTTGGGAAGCCGGCTACAATTGAGCTGACTCATAACTG
GGGAACAGAAAGTGATCCCGACTTCAAAGGTTATCACAATGGGAATTCAG
AACCCCGTGGCTTTGGGCACATCGGCATCACTGTTGATGATGTATATAAG
GCATGTGAGAGGTTTGAACGTCTAGGGGTGGAATTTGCAAAGAAACCAGA
TGGTGGAAAAATGAAAGGCGTAGCATTCATTAAAGACCCTGATGACTATT
GGATTGAAATCTTTGACCTCAAAACAATTGGAAAAATTGGCGGTAGCACT
TGATATGACATTGCTCACTCAGGGAAGGCGGGATCCATTCATTGTAGTGT
TTGATAAATC
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