FC929843

Overview
NameFC929843
Unique NameFC929843
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length709
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929843 vs. ExPASy Swiss-Prot
Match: DPH2_DEBHA (Diphthamide biosynthesis protein 2 OS=Debaryomyces hansenii GN=DPH2 PE=3 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 8.084e-17
Identity = 51/138 (36.96%), Postives = 75/138 (54.35%), Query Frame = 1
Query:   97 KFTRVALQ*F*FPDNLLKDSIRIVRALRAELGSLR----SSDGERSVDD----------KDIGLFVMADTTYGSCCVDEVGASHIDADCVIHYGHTCLSPTSTLPAFFVFGKASINTSNCIENLSKHALTNGKPILVL 468
            K+  V LQ   FPD+L+ DS  IV  L+ ELG +     SS+ + S D               L+++ADT+Y SCC+DEV A H+++D VIH+G  CL+   +LPA +VFGK S+   + I    +        IL++
Sbjct:   77 KYKHVTLQ---FPDSLICDSASIVHELQRELGLMPRTEDSSEVKCSADSCCKTGKVESPLSQKLWILADTSYSSCCIDEVAAGHVNSDLVIHFGDACLNVVESLPAAYVFGKPSLKLDSVITQFKEIYANRDSKILIM 211          
BLAST of FC929843 vs. ExPASy Swiss-Prot
Match: DPH2_CRYNE (Diphthamide biosynthesis protein 2 OS=Cryptococcus neoformans GN=DPH2 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.379e-16
Identity = 49/162 (30.25%), Postives = 81/162 (50.00%), Query Frame = 1
Query:   40 MDFELNYEIASTADFIYSRKFTRVALQ*F*FPDNLLKDSIRIVRALRAELGSLRSSDGERSVDDKDIGLFVMADTTYGSCCVDEVGASHIDADCVIHYGHTCLSPTSTLPAFFVFGKASINTSNCIENL---SKHALTNG--KPILVLYGLEYAHAIPHIRE 510
            M  E  +E+  T   +    +  + LQ   FPD LL  S+ + RA++  +    +              +V+AD+TYG+CC D +   H+ AD ++HYGH CL+PT  LP  +VF +  ++    +E+L   SK+ L     K I+V++ + Y      IR+
Sbjct:   39 MSIEEAFEVDETVRRVLEGDYKTIGLQ---FPDELLPSSVSVYRAIQTRIAHTGAQ------------AYVLADSTYGNCCPDVLSCLHLPADFLVHYGHACLTPTDALPVHYVFPRQKLDVKQAVESLLAASKNELDGDGRKGIVVVWDVSYDWLANDIRD 185          
BLAST of FC929843 vs. ExPASy Swiss-Prot
Match: DPH2_DICDI (Diphthamide biosynthesis protein 2 OS=Dictyostelium discoideum GN=dph2 PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.352e-16
Identity = 55/153 (35.95%), Postives = 82/153 (53.59%), Query Frame = 1
Query:   46 FELNYEIASTADFIYSRKFTRVALQ*F*FPDNLLKDSIRIVRALRAELGSLRSSDGERSVD-DKDIGLFVMADTTYGSCCVDEVGASHIDADCVIHYGHTCLSPTSTLPAFFVFG-KASINTSNCIENLSKHALTNGKP---ILVLYGLEYAH 489
            FE  ++++ +   I    F ++ALQ    PD LL  S  +            S+  + SV  +  I +F++ DT+YGSCCVDEV +SH+ +D +IHYGH+CLSP+S +P  +VFG K + N       L+K  L   K     ++ Y L Y H
Sbjct:   42 FEEYFQVSESISVIIKNNFKKIALQ---LPDYLLWASSEL------------SNKIQNSVPLEYGIKVFILGDTSYGSCCVDEVTSSHLKSDFIIHYGHSCLSPSSKIPVQYVFGKKKNFNVDKFSIELNK--LVESKKEENFVIFYDLLYHH 177          
BLAST of FC929843 vs. ExPASy Swiss-Prot
Match: DPH2_ASHGO (Diphthamide biosynthesis protein 2 OS=Ashbya gossypii GN=DPH2 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.240e-16
Identity = 50/142 (35.21%), Postives = 74/142 (52.11%), Query Frame = 1
Query:   58 YEIASTADFIYSR-KFTRVALQ*F*FPDNLLKDSIRIVRALRAELGSLRSS---------------------DGERSVDDKDIGLFVMADTTYGSCCVDEVGASHIDADCVIHYGHTCLSPTSTLPAFFVFGKASINTSNCI 417
            Y I S AD + S  ++  + LQ   FPD+LL DS  +   L+A L  L+ +                     D + S D + I  +++ADT Y  CCVDEV A H+ AD V+H+G TCL+P  TLP  ++FG+  ++ +  I
Sbjct:   54 YAIESLADHLNSHAEYRSITLQ---FPDDLLFDSALVAEELQALLPDLQCARTDAPAQADTTCSCGTQKTCADSKDSADGRKI--WILADTAYSPCCVDEVAAEHVQADVVVHFGDTCLNPVETLPVVYIFGEPYLDRAKVI 190          
BLAST of FC929843 vs. ExPASy Swiss-Prot
Match: DPH2_CANGA (Diphthamide biosynthesis protein 2 OS=Candida glabrata GN=DPH2 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.938e-16
Identity = 47/136 (34.56%), Postives = 71/136 (52.21%), Query Frame = 1
Query:   97 KFTRVALQ*F*FPDNLLKDSIRIVRALRAELGSLRSSDGERSVDDKDIGLFVMADTTYGSCCVDEVGASHIDADCVIHYGHTCLSPTSTLPAFFVFGKASINTSNCIENLSKHALTNGKPILVLYGLEYAHAIPHI 504
            ++ ++ LQ   FPD L+KDS  I+RAL+ +L      DG    D      + +ADT Y +CCVDEV A H+  D VIH+G  CL+    LP  + FGK  ++T   +   ++      + I ++    Y H IP +
Sbjct:   68 EYVQITLQ---FPDTLVKDSSFIIRALQDKL------DG----DGAGRKFWALADTAYSACCVDEVAAEHVKGDLVIHFGDACLNAIQKLPVVYDFGKPFLDTDVLLACFTEEFKDKDQKICLMSNASYTHHIPDL 190          
BLAST of FC929843 vs. ExPASy Swiss-Prot
Match: DPH2_YARLI (Diphthamide biosynthesis protein 2 OS=Yarrowia lipolytica GN=DPH2 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.525e-15
Identity = 46/137 (33.58%), Postives = 73/137 (53.28%), Query Frame = 1
Query:   58 YEIASTADFIYSRKFTRVALQ*F*FPDNLLKDSIRIVRALRAELGSLRSSDGERSVDDKDIGLFVMADTTYGSCCVDEVGASHIDADCVIHYGHTCLSPTSTLPAFFVFGKASINTSNCIENLSKHALTNGKPILVL 468
            Y +    +++ S ++  +ALQ   FP N + DS  +VR L+  +             D  I LF++ADT Y  CCVD VGA+HI AD V+H+G  CL+P  T+P  +VF    I+    ++ L++      +P ++L
Sbjct:   33 YCLPQLTEYLNSHEYKSIALQ---FPANDVADSALVVRLLKQTV-------------DPSISLFILADTNYSPCCVDVVGANHIKADLVVHFGSACLNPV-TMPVVYVFCNPEIDVKVMVDQLTEQIKDAEQPNILL 152          
BLAST of FC929843 vs. ExPASy Swiss-Prot
Match: DPH2_PONAB (Diphthamide biosynthesis protein 2 OS=Pongo abelii GN=DPH2 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.794e-15
Identity = 51/152 (33.55%), Postives = 71/152 (46.71%), Query Frame = 1
Query:   43 DFELNYEIASTADFIYSRKFTRVALQ*F*FPDNLLKDSIRIVRALRAELGSLRSSDGERSVDDKDIGLFVMADTTYGSCCVDEVGASHIDADCVIHYGHTCLSPTS-TLPAFFVFGKASINTSNCIENLSKHALTNGKPILVLYGLEYAHAI 495
            D +  YE+   A F+      RVALQ   FPD LL D++ +   L    GS                +F++ DT YGSCCVD +GA    A  VIH+G  CLSP +  LP  FV  + S+    C++           P+++L     AHA+
Sbjct:   28 DLDRVYELERVAGFVRDLGCERVALQ---FPDQLLGDAVAVAARLEETTGSK---------------MFILGDTAYGSCCVDVLGAEQAGAQAVIHFGPACLSPPARPLPVTFVLCRRSVALELCVKAFEAQNPDPKAPVVLLSEPACAHAL 161          
BLAST of FC929843 vs. ExPASy Swiss-Prot
Match: DPH2_HUMAN (Diphthamide biosynthesis protein 2 OS=Homo sapiens GN=DPH2 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.202e-14
Identity = 50/152 (32.89%), Postives = 71/152 (46.71%), Query Frame = 1
Query:   43 DFELNYEIASTADFIYSRKFTRVALQ*F*FPDNLLKDSIRIVRALRAELGSLRSSDGERSVDDKDIGLFVMADTTYGSCCVDEVGASHIDADCVIHYGHTCLSPTS-TLPAFFVFGKASINTSNCIENLSKHALTNGKPILVLYGLEYAHAI 495
            D +  YE+   A F+      RVALQ   FPD LL D++ +   L    GS                +F++ DT YGSCCVD +GA    A  +IH+G  CLSP +  LP  FV  + S+    C++           P+++L     AHA+
Sbjct:   28 DLDGVYELERVAGFVRDLGCERVALQ---FPDQLLGDAVAVAARLEETTGSK---------------MFILGDTAYGSCCVDVLGAEQAGAQALIHFGPACLSPPARPLPVAFVLRQRSVALELCVKAFEAQNPDPKAPVVLLSEPACAHAL 161          
BLAST of FC929843 vs. ExPASy Swiss-Prot
Match: DPH2_CRIGR (Diphthamide biosynthesis protein 2 OS=Cricetulus griseus GN=DPH2 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.406e-14
Identity = 50/152 (32.89%), Postives = 70/152 (46.05%), Query Frame = 1
Query:   43 DFELNYEIASTADFIYSRKFTRVALQ*F*FPDNLLKDSIRIVRALRAELGSLRSSDGERSVDDKDIGLFVMADTTYGSCCVDEVGASHIDADCVIHYGHTCLS-PTSTLPAFFVFGKASINTSNCIENLSKHALTNGKPILVLYGLEYAHAI 495
            D +  YE+     F+      RVALQ   FPD LL D+  +   L    GS                +F++ DT YGSCCVD +GA    A+ ++H+G  CLS P S LP  FV G+ S+    C +           P+++L     AHA+
Sbjct:   28 DLDRVYELERVTKFVCDLGCQRVALQ---FPDQLLGDAGAVAVRLEEVTGSK---------------MFILGDTAYGSCCVDVLGAEQAGAEALVHFGPACLSPPASLLPITFVLGQRSVALELCAKAFEARNPDPTAPVVLLSEPACAHAL 161          
BLAST of FC929843 vs. ExPASy Swiss-Prot
Match: DPH2_BOVIN (Diphthamide biosynthesis protein 2 OS=Bos taurus GN=DPH2 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.366e-14
Identity = 49/152 (32.24%), Postives = 69/152 (45.39%), Query Frame = 1
Query:   43 DFELNYEIASTADFIYSRKFTRVALQ*F*FPDNLLKDSIRIVRALRAELGSLRSSDGERSVDDKDIGLFVMADTTYGSCCVDEVGASHIDADCVIHYGHTCLSPTS-TLPAFFVFGKASINTSNCIENLSKHALTNGKPILVLYGLEYAHAI 495
            D +  YE+     F+      RVALQ   FPD LL D+  +   L    GS                +F++ DT YGSCCVD +GA    A  ++H+G  CLSP +  LP  FV G+ S+    C +           P+++L     AHA+
Sbjct:   28 DLDRVYELERVVGFVRDLGCQRVALQ---FPDQLLGDAGAVAALLEEATGSK---------------MFILGDTAYGSCCVDVLGAEQAGAQALVHFGPACLSPPARPLPVAFVLGQRSVALELCAKAFEAQNPDPTAPVVLLSEPSCAHAL 161          
The following BLAST results are available for this feature:
BLAST of FC929843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
DPH2_DEBHA8.084e-1736.96Diphthamide biosynthesis protein 2 OS=Debaryomyces... [more]
DPH2_CRYNE1.379e-1630.25Diphthamide biosynthesis protein 2 OS=Cryptococcus... [more]
DPH2_DICDI2.352e-1635.95Diphthamide biosynthesis protein 2 OS=Dictyosteliu... [more]
DPH2_ASHGO5.240e-1635.21Diphthamide biosynthesis protein 2 OS=Ashbya gossy... [more]
DPH2_CANGA8.938e-1634.56Diphthamide biosynthesis protein 2 OS=Candida glab... [more]
DPH2_YARLI1.525e-1533.58Diphthamide biosynthesis protein 2 OS=Yarrowia lip... [more]
DPH2_PONAB5.794e-1533.55Diphthamide biosynthesis protein 2 OS=Pongo abelii... [more]
DPH2_HUMAN2.202e-1432.89Diphthamide biosynthesis protein 2 OS=Homo sapiens... [more]
DPH2_CRIGR6.406e-1432.89Diphthamide biosynthesis protein 2 OS=Cricetulus g... [more]
DPH2_BOVIN8.366e-1432.24Diphthamide biosynthesis protein 2 OS=Bos taurus G... [more]

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Properties
Property NameValue
Genbank descriptionC34001A05EF PostHarvC1 Citrus clementina cDNA clone C34001A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929843 ID=FC929843; Name=FC929843; organism=Citrus clementina; type=EST; length=709bp
GAAGAGTGAAATACAGAGAGATTAGTAAACTCTTTGGACATGGACTTCGA
ATTAAATTACGAAATTGCCAGCACTGCCGATTTTATTTACAGTAGGAAAT
TCACTAGAGTTGCTTTGCAGTGATTTTAGTTTCCAGATAATTTATTGAAG
GATTCAATAAGAATAGTGCGAGCGCTGAGGGCCGAACTTGGGTCACTTAG
AAGTTCTGATGGTGAACGGAGTGTGGATGACAAAGATATTGGATTATTTG
TAATGGCAGACACAACTTATGGCAGCTGTTGTGTTGACGAGGTTGGAGCA
TCCCACATTGATGCCGATTGTGTCATACATTATGGACATACCTGTCTTAG
CCCGACATCGACTCTTCCCGCATTCTTTGTATTCGGAAAGGCTTCCATTA
ATACATCAAACTGCATTGAAAACTTATCAAAGCATGCTTTGACCAATGGC
AAACCTATTTTGGTTCTTTATGGATTGGAGTATGCGCATGCAATACCACA
TATTAGAGAAGCAGTGAAAGTAGCATCAAGCTCTTATGGGTCTGGGTCGA
AATTAGAAAGCAATTTTGCTGATGTTATGTGTTCAGTTATAACACCATCC
AAAGATCATAAAAGTTTATGTGGACCAGCTGGTGGCTGCACTGCTGATGA
GAGTTCTTACGCAGTAGCTGGTACTAGGCATACAATTGGAGGCTTGGTCT
GGAATATCC
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