FC929850
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929850 vs. ExPASy Swiss-Prot
Match: TBB_EUGGR (Tubulin beta chain OS=Euglena gracilis GN=TUBB PE=2 SV=1) HSP 1 Score: 344.354 bits (882), Expect = 4.129e-94 Identity = 169/215 (78.60%), Postives = 182/215 (84.65%), Query Frame = 2 Query: 83 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEDADECMVLDNEALYDICFQTL 727 MREI+HIQ GQCGNQIG+KFWEVI DE G+D GDSDLQLERINVYYNEA+GGRYVP A+LMDLEPGTMDSVR+GP+GQIFRPDNFVFGQ+GAGNNWAKGHYTEG ELIDSVLDVVRKEAE+CDCLQGFQ+ H ISKIREEYPDRMM+TFSV PSPKVSDTVVEPYN TLSVHQLVE+ADE M + NEALYDIC TL Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEQGVDPPD-IPGDSDLQLERINVYYNEATGGRYVP-AILMDLEPGTMDSVRAGPYGQIFRPDNFVFGQTGAGNNWAKGHYTEGPELIDSVLDVVRKEAESCDCLQGFQIAHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVIPSPKVSDTVVEPYNTTLSVHQLVENADEVMCIGNEALYDICLPTL 213
BLAST of FC929850 vs. ExPASy Swiss-Prot
Match: TBB1_HOMAM (Tubulin beta-1 chain OS=Homarus americanus PE=2 SV=1) HSP 1 Score: 343.969 bits (881), Expect = 5.393e-94 Identity = 168/231 (72.73%), Postives = 190/231 (82.25%), Query Frame = 2 Query: 83 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSG-DSDL---QLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEDADECMVLDNEALYDICFQTLS-SPPYFCDLNH 760 MREI+H+Q GQCGNQIG KFWE+I DEHGI TG+Y+G D DL QLERINVYYNE + G+YVPRAVL+DLEPGTMDSVR+GP GQ+F+PD+FVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE CDCLQGFQ+ H +SKIREE+PDR+M TFSV PSPKVSDTVVEPYNATLS+HQLVE+ DE +DNEALYDICF+TL P + DLNH Sbjct: 1 MREIVHLQTGQCGNQIGTKFWEIISDEHGIQPTGEYTGADKDLMELQLERINVYYNEGNQGKYVPRAVLVDLEPGTMDSVRAGPHGQLFKPDSFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEKCDCLQGFQLTHSLGGGTGSGMGTLLVSKIREEFPDRIMNTFSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLQNPTYGDLNH 231
BLAST of FC929850 vs. ExPASy Swiss-Prot
Match: TBB8B_HUMAN (Tubulin beta-8 chain B OS=Homo sapiens PE=1 SV=1) HSP 1 Score: 342.813 bits (878), Expect = 1.201e-93 Identity = 167/227 (73.57%), Postives = 186/227 (81.94%), Query Frame = 2 Query: 83 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEDADECMVLDNEALYDICFQTLSSP-PYFCDLNH 760 MREI+ Q GQCGNQIGAKFWEVI DEH ID G Y GDS LQLERINV+++EASGGRYVPRAVL+DLEPGTMDSV SGPFGQ+FRPDNF+ GQ GAGNNWAKG YTEGAEL +SV+DVVRKEAE+CDCLQGFQ+ H ISKIREEYPDR++ TFS+ PSPKVSDTVVEPYNATLSVHQL+E+ADE +DNEALYDIC +TL P P + DLNH Sbjct: 1 MREIVLTQTGQCGNQIGAKFWEVISDEHAIDSAGTYHGDSHLQLERINVHHHEASGGRYVPRAVLVDLEPGTMDSVHSGPFGQVFRPDNFISGQCGAGNNWAKGRYTEGAELTESVMDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIINTFSILPSPKVSDTVVEPYNATLSVHQLIENADETFCIDNEALYDICSRTLKLPTPTYGDLNH 227
BLAST of FC929850 vs. ExPASy Swiss-Prot
Match: TBB2_TRIVE (Tubulin beta-2 chain OS=Trichoderma virens PE=2 SV=1) HSP 1 Score: 342.813 bits (878), Expect = 1.201e-93 Identity = 162/227 (71.37%), Postives = 187/227 (82.38%), Query Frame = 2 Query: 83 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEDADECMVLDNEALYDICFQTLS-SPPYFCDLNH 760 MREI+HIQ GQCGNQIGA FW+ I EHG+D G Y G S+LQLER+NVY+NEA+ +YVPRAVL+DLEPGTMD+VR+GPFGQ+FRPDNF+FGQS AGNNWAKGHYTEGAEL+D+VLDV+R+EAE CDCLQGFQ+ H ISKIREE+PDRMM TFSV PSPKVSDTVVEPYNATLSVHQLVE++DE +DNEALYDIC +TL S P + DLN+ Sbjct: 1 MREIVHIQTGQCGNQIGAAFWQTISGEHGLDSNGIYGGSSELQLERMNVYFNEANNNKYVPRAVLVDLEPGTMDAVRAGPFGQLFRPDNFIFGQSSAGNNWAKGHYTEGAELVDNVLDVIRREAEGCDCLQGFQITHSLGGGTGSGMGTLLISKIREEFPDRMMATFSVVPSPKVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYDICMRTLKLSNPAYGDLNY 227
BLAST of FC929850 vs. ExPASy Swiss-Prot
Match: TBB_PORPU (Tubulin beta chain OS=Porphyra purpurea GN=TUBB1 PE=3 SV=1) HSP 1 Score: 342.428 bits (877), Expect = 1.569e-93 Identity = 162/226 (71.68%), Postives = 185/226 (81.86%), Query Frame = 2 Query: 83 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEDADECMVLDNEALYDICFQTLSSP-PYFCDLN 757 MREI+HIQ GQCGNQIGAKFWEVI +EHGID +G Y+G SDLQL+R VYYNE SGGRYVPRAVL+DLEPG +D++++GP G ++RPDNFV GQSGAGNNWAKGHYTEGAEL+DSVLDVVR+EAE CDCLQGFQV H +SKIREE+PDRMM T+SV PSPKVSDTVVEPYN TLSVHQLVE+AD +DNEALY+IC+ TL P P + DLN Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISEEHGIDSSGAYNGTSDLQLDRAEVYYNEGSGGRYVPRAVLVDLEPGVLDTIKAGPHGGLYRPDNFVAGQSGAGNNWAKGHYTEGAELVDSVLDVVRREAEGCDCLQGFQVTHSLGGGTGSGMGTLLVSKIREEFPDRMMCTYSVMPSPKVSDTVVEPYNCTLSVHQLVENADAVFCIDNEALYNICYNTLKKPEPAYPDLN 226
BLAST of FC929850 vs. ExPASy Swiss-Prot
Match: TBB_PORYE (Tubulin beta chain OS=Porphyra yezoensis GN=TUBB1 PE=3 SV=1) HSP 1 Score: 341.273 bits (874), Expect = 3.496e-93 Identity = 162/226 (71.68%), Postives = 184/226 (81.42%), Query Frame = 2 Query: 83 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEDADECMVLDNEALYDICFQTLSSP-PYFCDLN 757 MREI+HIQ GQCGNQIGAKFWEVI +EHGID +G Y G SDLQL+R VYYNE SGGRYVPRAVL+DLEPG +D++++GP G ++RPDNFV GQSGAGNNWAKGHYTEGAEL+DSVLDVVR+EAE CDCLQGFQV H +SKIREE+PDRMM T+SV PSPKVSDTVVEPYN TLSVHQLVE+AD +DNEALY+IC+ TL P P + DLN Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISEEHGIDSSGAYIGTSDLQLDRAEVYYNEGSGGRYVPRAVLVDLEPGVLDTIKAGPHGGLYRPDNFVAGQSGAGNNWAKGHYTEGAELVDSVLDVVRREAEGCDCLQGFQVTHSLGGGTGSGMGTLLVSKIREEFPDRMMCTYSVMPSPKVSDTVVEPYNCTLSVHQLVENADAVFCIDNEALYNICYNTLKKPEPAYPDLN 226
BLAST of FC929850 vs. ExPASy Swiss-Prot
Match: TBB2_EMENI (Tubulin beta-2 chain OS=Emericella nidulans GN=tubC PE=3 SV=2) HSP 1 Score: 340.502 bits (872), Expect = 5.963e-93 Identity = 160/227 (70.48%), Postives = 187/227 (82.38%), Query Frame = 2 Query: 83 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEDADECMVLDNEALYDICFQTLS-SPPYFCDLNH 760 MREI+H+Q GQCGNQ+G+ FW+ I EHG+D +G Y+GDSDLQLER+NVY+NEA G +YVPRAVL+DLEPGTMD++RSGP G ++RPDNF++GQS AGNNWAKGHYTEGAEL+D V+DVVR+EAE+CDCLQGFQV H ISKIREE+PDRMM TFSV PSPKVSDTVVEPYNATLSVHQLVE +DE LDN+ALYDIC +TL S P + DLNH Sbjct: 1 MREIVHLQTGQCGNQVGSAFWQTISGEHGLDASGIYTGDSDLQLERMNVYFNEAGGNKYVPRAVLIDLEPGTMDALRSGPNGALYRPDNFIYGQSSAGNNWAKGHYTEGAELVDQVIDVVRREAESCDCLQGFQVTHSLGGGTGSGMGTLLISKIREEFPDRMMATFSVMPSPKVSDTVVEPYNATLSVHQLVEHSDETFCLDNDALYDICIRTLKLSSPSYGDLNH 227
BLAST of FC929850 vs. ExPASy Swiss-Prot
Match: TBB2_TRIVI (Tubulin beta-2 chain OS=Trichoderma viride GN=tub2 PE=3 SV=1) HSP 1 Score: 340.117 bits (871), Expect = 7.787e-93 Identity = 161/227 (70.93%), Postives = 187/227 (82.38%), Query Frame = 2 Query: 83 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEDADECMVLDNEALYDICFQTLS-SPPYFCDLNH 760 MREI++IQ GQCGNQIGA FW+ I EHG+D G Y+G S+LQLER+NVY+NEAS +YVPRAVL+DLEPGTMD+VR+GPFGQ+FRPDNF+FGQS AGNNWAKGHYTEGAEL+D VLDVVR+EAE CDCLQGFQ+ H +SKIREE+PDRMM TFSV PSPKVSDTVVEPYNATLSVHQLVE++DE +DNEALYDIC +TL + P + DLN+ Sbjct: 1 MREIVYIQTGQCGNQIGAAFWQTISGEHGLDSNGIYNGSSELQLERMNVYFNEASNNKYVPRAVLVDLEPGTMDAVRAGPFGQLFRPDNFIFGQSSAGNNWAKGHYTEGAELVDQVLDVVRREAEGCDCLQGFQITHSLGGGTGSGMGTLLLSKIREEFPDRMMATFSVVPSPKVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYDICMRTLKLNNPAYGDLNY 227
BLAST of FC929850 vs. ExPASy Swiss-Prot
Match: TBB1_TRIVI (Tubulin beta-1 chain OS=Trichoderma viride GN=tub1 PE=3 SV=1) HSP 1 Score: 339.732 bits (870), Expect = 1.017e-92 Identity = 162/229 (70.74%), Postives = 188/229 (82.10%), Query Frame = 2 Query: 83 MREIL--HIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEDADECMVLDNEALYDICFQTLS-SPPYFCDLNH 760 MREI+ H+Q GQCGNQ+G+ FW+ I EHG+D +G Y G SD QL+R+NVY+NEAS +YVPRAVL+DLEPGTMD+VRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D VLDVVR+EAENC+CLQGFQ+ H ISKIREE+PDRMM TFSV PSPKVSDTVVEPYNATLS+HQLVE++D+ +DNEALYDIC +TL S P + DLNH Sbjct: 1 MREIVSVHLQTGQCGNQVGSAFWQTISGEHGLDSSGVYGGTSDQQLDRLNVYFNEASNNKYVPRAVLVDLEPGTMDAVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDQVLDVVRREAENCECLQGFQITHSLGGGTGSGMGTLLISKIREEFPDRMMATFSVVPSPKVSDTVVEPYNATLSMHQLVENSDKTFCIDNEALYDICMRTLKLSNPSYGDLNH 229
BLAST of FC929850 vs. ExPASy Swiss-Prot
Match: TBBN_GUITH (Tubulin beta chain, nucleomorph OS=Guillardia theta GN=tubB PE=3 SV=2) HSP 1 Score: 338.961 bits (868), Expect = 1.735e-92 Identity = 159/227 (70.04%), Postives = 185/227 (81.50%), Query Frame = 2 Query: 83 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEDADECMVLDNEALYDICFQTLS-SPPYFCDLNH 760 MREI+H+Q GQCGNQIGAKFWEVI EHG+D G Y G+ D Q+E+I+VYYNE SG R+VPRAVL+DLEPGTMDSVR+ +G++FRPDNFVFGQSGAGNNWAKGHYTEGAELI+S +D++RKE+E C+CLQGFQ+ H ISKIREEYPDRMM T+SV PSPKVSDTVVEPYN TLS+HQLVE+ADE +DNEALYDICF+TL P + DLNH Sbjct: 1 MREIVHVQVGQCGNQIGAKFWEVISHEHGVDTNGTYFGNKDNQIEKIDVYYNEVSGNRFVPRAVLVDLEPGTMDSVRASNYGRLFRPDNFVFGQSGAGNNWAKGHYTEGAELIESAMDIIRKESEQCECLQGFQIAHSLGGGTGSGMGTLLISKIREEYPDRMMCTYSVVPSPKVSDTVVEPYNCTLSIHQLVENADEVFCIDNEALYDICFRTLKLVTPSYGDLNH 227 The following BLAST results are available for this feature:
BLAST of FC929850 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 422
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929850 ID=FC929850; Name=FC929850; organism=Citrus clementina; type=EST; length=760bpback to top |