FC929850
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929850 vs. ExPASy Swiss-Prot
Match: TBA_CANAL (Tubulin alpha chain OS=Candida albicans GN=TUB1 PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.347e-44 Identity = 90/230 (39.13%), Postives = 134/230 (58.26%), Query Frame = 2 Query: 83 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQL---ERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEDADECMVLDNEALYDICFQTLS-SPPYFCDLNH 760 MRE++ I GQ G QIG WE+ EHGI G D E + +++E G+YVPRA+ +DLEP +D VR+G + +F P+ + G+ A NN+A+GHYT G E++D +LD VR+ ++ CD LQGF H + ++ +Y + L F+V+P+P+VS +VVEPYN L+ H +E AD ++DNEA+YD+C + L + P F LN+ Sbjct: 1 MREVISINVGQAGCQIGNACWELYSQEHGIRPDGYLQEGLDRPKGGEEGFSTFFSETGSGKYVPRALYVDLEPNVIDEVRTGVYKDLFHPEQLIAGKEDAANNYARGHYTVGREILDDILDRVRRMSDQCDGLQGFLFTHSLGGGTGSGLGSLLLEQLSLDYGKKSKLEFAVYPAPQVSTSVVEPYNTVLTTHTTLEHADCTFMVDNEAIYDMCRRNLDIARPNFSSLNN 230
BLAST of FC929850 vs. ExPASy Swiss-Prot
Match: TBAN_GUITH (Tubulin alpha chain, nucleomorph OS=Guillardia theta GN=tubA PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.347e-44 Identity = 90/228 (39.47%), Postives = 137/228 (60.09%), Query Frame = 2 Query: 83 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQL--ERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEDADECMVLDNEALYDICFQTLS-SPPYFCDLN 757 MRE+L I GQ G Q+G WE+ C EHGI+ G D + + + + +++E S G+ VPR V +DLE G +D V++G + ++ P+ + G A NN+A+GHYT G E+I+ LD +RK ENC LQGF + + + ++ +Y + L F+V+PSP+VS VVEPYN+ L+ H L+E D +VLDNEA+Y+IC ++L+ P + +LN Sbjct: 1 MREVLSIHIGQAGIQVGNACWELYCLEHGINPDGSIIQDFNKKKNDDAFSTFFSETSTGKRVPRCVFLDLESGVIDEVKNGRYKNLYHPEQLICGNEDAANNYARGHYTIGKEIIEIALDRIRKLVENCSGLQGFLIFNSVGGGTGSGLGSLLLERLSLDYGKKSKLGFTVYPSPQVSTAVVEPYNSVLATHSLLEHTDVAVVLDNEAIYEICQRSLNIERPTYTNLN 228
BLAST of FC929850 vs. ExPASy Swiss-Prot
Match: TBG_USTVI (Tubulin gamma chain OS=Ustilago violacea GN=TUB4 PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.759e-44 Identity = 85/212 (40.09%), Postives = 128/212 (60.38%), Query Frame = 2 Query: 86 REILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEDADECMVLDNEALYDIC 715 REIL + GQ GNQIG++FW +C EHGI G + +R +V++ +A Y+PRAV++DLEP +DS++SGP+ ++ P+NF + GAGNNWAKG Y G + + V++++ +EAE D L+GF + H + ++ + YP +++ T+SVFP D VV+PYN+ LS+ +L AD +VLDN AL IC Sbjct: 3 REILTVSAGQAGNQIGSEFWSQLCAEHGISKEGVLEDWATDMTDRKDVFFYQADDEHYIPRAVMIDLEPRVLDSIKSGPYKNLYNPENFFYDPQGGGAGNNWAKG-YAAGERVYEEVMEMIDREAEGSDSLEGFMLLHSIAGGTGSGLGSYLLERMNDRYPKKLIQTYSVFPDADSGDVVVQPYNSLLSMKRLTNHADSVIVLDNAALSKIC 213
BLAST of FC929850 vs. ExPASy Swiss-Prot
Match: TBA8_RAT (Tubulin alpha-8 chain OS=Rattus norvegicus GN=Tuba8 PE=2 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 2.298e-44 Identity = 91/232 (39.22%), Postives = 135/232 (58.19%), Query Frame = 2 Query: 83 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERIN------VYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEDADECMVLDNEALYDICFQTLS-SPPYFCDLN 757 MRE + + GQ G QIG WE+ C EHGI G + Q +IN +++E G++VPRAV++DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E ID VLD +RK + C LQGF + H + ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E +D ++DNEA+YDIC + L P + +LN Sbjct: 1 MRECISVHVGQAGVQIGNACWELFCLEHGIQADGTFG----TQASKINDDDSFTTFFSETGNGKHVPRAVMVDLEPTVVDEVRAGTYRQLFHPEQLITGKEDAANNYARGHYTVGKESIDLVLDRIRKLTDACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLN 228
BLAST of FC929850 vs. ExPASy Swiss-Prot
Match: TBA8_MOUSE (Tubulin alpha-8 chain OS=Mus musculus GN=Tuba8 PE=1 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 2.298e-44 Identity = 91/232 (39.22%), Postives = 135/232 (58.19%), Query Frame = 2 Query: 83 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERIN------VYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEDADECMVLDNEALYDICFQTLS-SPPYFCDLN 757 MRE + + GQ G QIG WE+ C EHGI G + Q +IN +++E G++VPRAV++DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E ID VLD +RK + C LQGF + H + ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E +D ++DNEA+YDIC + L P + +LN Sbjct: 1 MRECISVHVGQAGVQIGNACWELFCLEHGIQADGTFG----TQASKINDDDSFTTFFSETGNGKHVPRAVMVDLEPTVVDEVRAGTYRQLFHPEQLITGKEDAANNYARGHYTVGKESIDLVLDRIRKLTDACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLN 228
BLAST of FC929850 vs. ExPASy Swiss-Prot
Match: TBA_AJECA (Tubulin alpha chain (Fragment) OS=Ajellomyces capsulata GN=TUB1 PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 3.001e-44 Identity = 87/220 (39.55%), Postives = 129/220 (58.64%), Query Frame = 2 Query: 83 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTG-----KYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEDADECMVLDNEALYDICFQTL 727 MRE++ + GQ G QI WE+ C EHGI G + + D D + N +++E G+YVPR + DLEP +D VR+GP+ +F P+ + G+ A NN+A+GHYT G E+ID LD VR+ A+NC LQGF V H + ++ +Y + L F V+P+P+ + +VVEPYN+ L+ H +E +D ++DNEA+YDIC + L Sbjct: 1 MREVVSLNVGQAGGQIANSCWELYCLEHGIQPDGYLTEERKAADPD---QGFNTFFSETGQGKYVPRTIYCDLEPNVVDEVRTGPYRALFHPEQMITGKEDASNNYARGHYTVGKEMIDQCLDKVRRVADNCSGLQGFLVFHSFGGGQGSGFGALLMERLSVDYGKKTKLEFCVYPAPQNATSVVEPYNSILTTHTTLEHSDVQFMVDNEAIYDICRRNL 217
BLAST of FC929850 vs. ExPASy Swiss-Prot
Match: TBA2_NEUCR (Tubulin alpha-B chain OS=Neurospora crassa GN=tba-2 PE=2 SV=2) HSP 1 Score: 178.718 bits (452), Expect = 3.001e-44 Identity = 92/231 (39.83%), Postives = 134/231 (58.01%), Query Frame = 2 Query: 83 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTG-----KYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEDADECMVLDNEALYDICFQTLS-SPPYFCDLN 757 MREI+ + GQ G QI WE+ C EHGI G + + D D + +++E G+YVPR + DLEP +D VR+G + +F P++ + G+ A NN+A+GHYT G ELID VLD VR+ A+NC LQGF V H + ++ +Y + L F V+P+P+ + +VVEPYN+ L+ H +E AD ++DNEA+YDIC + L P + +LN Sbjct: 1 MREIISLNVGQAGCQIANSCWELYCLEHGIQPDGYLTEERKAADPD---HGFSTFFSETGNGKYVPRTIYADLEPNVIDEVRTGAYRGLFHPEHMISGKEDASNNYARGHYTVGKELIDQVLDKVRRVADNCSGLQGFLVFHSFGGGTGSGFGALLMERLSVDYGKKSKLEFCVYPAPQTATSVVEPYNSILTTHTTLEHADCSFMVDNEAIYDICRRNLGLERPNYENLN 228
BLAST of FC929850 vs. ExPASy Swiss-Prot
Match: TBA_DICDI (Tubulin alpha chain OS=Dictyostelium discoideum GN=tubA PE=1 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 3.919e-44 Identity = 94/233 (40.34%), Postives = 138/233 (59.23%), Query Frame = 2 Query: 86 REILHIQGGQCGNQIGAKFWEVICDEHGIDHTG------KYSGDSDLQLERINVYYNEASGGR-YVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEY-PDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEDADECMVLDNEALYDICFQTLS-SPPYFCDLN 757 REI+ I GQ G Q+G WE+ C EHGI+ G K S D + + + +++E++ G+ VPRA+ +DLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G ELID +D +R+ A+ CD LQGF V H + K+ +Y + L F V+PSP+VS +VVEPYN+ LS H L+E D +LDNEA+Y+IC +L P + +LN Sbjct: 3 REIISIHIGQAGVQVGNSCWELYCLEHGIERDGSIPADRKQSSDVNNLNKDLGTFFSESTNGKKVVPRAIFLDLEPTVIDEIRTGDYKNLFHPEQLITGKEDAANNYARGHYTVGKELIDVCVDRIRRLADQCDGLQGFLVFHSVGGGTGSGFGSLLLQKLALDYGGKKSKLDFCVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSFMLDNEAIYNICKNSLDIEKPTYTNLN 235
BLAST of FC929850 vs. ExPASy Swiss-Prot
Match: TBA3_YEAST (Tubulin alpha-3 chain OS=Saccharomyces cerevisiae GN=TUB3 PE=1 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 3.919e-44 Identity = 91/229 (39.74%), Postives = 132/229 (57.64%), Query Frame = 2 Query: 83 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQL---ERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEDADECMVLDNEALYDICFQTLS-SPPYFCDLN 757 MRE++ I GQ G QIG WE+ EHGI G E + +++E G++VPRA+ +DLEP +D VR+G F ++F P+ + G+ A NN+A+GHYT G E++D V + +RK A+ CD LQGF H + + EY + L F+V+P+P++S +VVEPYN L+ H +E AD ++DNEA+YDIC + L S P F +LN Sbjct: 1 MREVISINVGQAGCQIGNACWELYSLEHGIKEDGHLEDGLSKPKGGEEGFSTFFHETGYGKFVPRAIYVDLEPNVIDEVRTGRFKELFHPEQLINGKEDAANNYARGHYTVGREIVDEVEERIRKMADQCDGLQGFLFTHSLGGGTGSGLGSLLLENLSYEYGKKSKLEFAVYPAPQLSTSVVEPYNTVLTTHTTLEHADCTFMVDNEAIYDICKRNLGISRPSFSNLN 229
BLAST of FC929850 vs. ExPASy Swiss-Prot
Match: TBA5_CHICK (Tubulin alpha-5 chain OS=Gallus gallus PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 6.685e-44 Identity = 88/228 (38.60%), Postives = 132/228 (57.89%), Query Frame = 2 Query: 83 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQL--ERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEDADECMVLDNEALYDICFQTLS-SPPYFCDLN 757 MRE + + GQ G Q+G WE+ C EHGI G+ D + + ++ E G++VPRA+ +DLEP +D VR+G + Q+F P+ + G+ NN+A+GHYT G E+ID VLD +RK A+ C LQGF H + ++ +Y + L FS++P+P+VS VVEPYN+ L+ H +E +D ++DNEA+YDIC + L P + +LN Sbjct: 1 MRECISVHVGQAGVQMGNTCWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGKHVPRAIFVDLEPTVIDEVRAGIYRQLFHPEQLITGKEDGANNYARGHYTIGKEIIDQVLDRIRKLADQCTGLQGFLCFHSFGGGTGSGFTSLLMERLSGDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLN 228 The following BLAST results are available for this feature:
BLAST of FC929850 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 422
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929850 ID=FC929850; Name=FC929850; organism=Citrus clementina; type=EST; length=760bpback to top |