FC929850
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929850 vs. ExPASy Swiss-Prot
Match: TBA_GIBZE (Tubulin alpha chain OS=Gibberella zeae GN=TUB1 PE=3 SV=2) HSP 1 Score: 177.178 bits (448), Expect = 8.731e-44 Identity = 89/228 (39.04%), Postives = 134/228 (58.77%), Query Frame = 2 Query: 83 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQL--ERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEDADECMVLDNEALYDICFQTLS-SPPYFCDLN 757 MRE++ I GQ G QI WE+ C EHGI G + + Q + + +++E G++VPRA+ DLEP +D VR+G + +F P+ + G+ A NN+A+GHYT G ELID VLD +R+ A+NC LQGF V H + ++ +Y + L F V+P+P+ + +VVEPYN+ L+ H +E +D ++DNEA+YDIC + L P + +LN Sbjct: 1 MREVISINVGQAGCQIANSCWELYCLEHGIQPDGYLTEERKAQDPDQGFSTFFSETGNGKHVPRAIYCDLEPNVVDEVRTGAYRNLFHPEMMITGKEDASNNYARGHYTVGKELIDGVLDKIRRVADNCAGLQGFLVFHSFGGGTGSGFGALLMERLSVDYGKKSKLEFCVYPAPQTATSVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLGLERPNYENLN 228
BLAST of FC929850 vs. ExPASy Swiss-Prot
Match: TBA8_BOVIN (Tubulin alpha-8 chain OS=Bos taurus GN=TUBA8 PE=2 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 8.731e-44 Identity = 87/228 (38.16%), Postives = 132/228 (57.89%), Query Frame = 2 Query: 83 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDL--QLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEDADECMVLDNEALYDICFQTLS-SPPYFCDLN 757 MRE + + GQ G QIG WE+ C EHGI G + + + +++E G++VPRAV++DLEP +D VR+G + +F P+ + G+ A NN+A+GHYT G E ID VLD +RK + C LQGF + H + ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E +D ++DNEA+YDIC + L P + +LN Sbjct: 1 MRECISVHVGQAGVQIGNACWELFCLEHGIQADGTFGAQASKIHDDDSFTTFFSETGNGKHVPRAVMVDLEPTVVDEVRAGTYRHLFHPEQLITGKEDAANNYARGHYTVGKESIDLVLDRIRKLTDACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLN 228
BLAST of FC929850 vs. ExPASy Swiss-Prot
Match: TBA_MYCGR (Tubulin alpha chain OS=Mycosphaerella graminicola PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.140e-43 Identity = 92/232 (39.66%), Postives = 133/232 (57.33%), Query Frame = 2 Query: 83 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTG------KYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEDADECMVLDNEALYDICFQTLS-SPPYFCDLN 757 MRE++ + GQ G QI WE+ C EHGI G K + D D + +++E G+YVPR + DLEP +D VR+G + +F P+ + G+ A NN+A+GHYT G ELID VLD VR A+NC LQGF V H + ++ +Y + L F V+P+P+V+ +VVEPYN+ L+ H +E +D ++DNEA+YDIC + L P + +LN Sbjct: 1 MREVISLNVGQAGCQIANSCWELYCLEHGIQPDGYLTEERKAAEDDD----GFSTFFSETGNGKYVPRTIYADLEPNVVDEVRTGTYRSLFHPELMITGKEDASNNYARGHYTVGKELIDQVLDKVRHVADNCSGLQGFLVFHSFGGGTGSGFGALLMERLSVDYGKKCKLEFCVYPAPQVATSVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLGIERPNYENLN 228
BLAST of FC929850 vs. ExPASy Swiss-Prot
Match: TBA_ASHGO (Tubulin alpha chain OS=Ashbya gossypii GN=TUB1 PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.140e-43 Identity = 92/235 (39.15%), Postives = 137/235 (58.30%), Query Frame = 2 Query: 83 MREILHIQG-GQCGNQIGAKFWEVICDEHGIDHTG-------KYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEDADECMVLDNEALYDICFQTLS-SPPYFCDLNH 760 MRE++ + GQ G QIG WE+ EHGI G K G E + ++NE G++VPRAV +DLEP +D VR+G + ++F P+ + G+ A NN+A+GHYT G EL+D +LD +RK ++ CD LQGF H + ++ +Y + L F+V+P+P+VS +VVEPYN L+ H +E AD ++DNEA+Y++C + L S P F +LN+ Sbjct: 1 MREVISVNAVGQAGCQIGNACWELYSLEHGIRPDGYLQEGLTKPKGGE----EGFSTFFNETGSGKFVPRAVYVDLEPNVIDEVRTGAYRELFHPEQLISGKEDAANNYARGHYTVGRELLDDILDRIRKISDQCDGLQGFLFTHSLGGGTGSGLGSLLLEQLSIDYGKKSKLEFAVYPAPQVSTSVVEPYNTVLTTHTTLEHADCTFMVDNEAIYEMCKKNLDISRPSFANLNN 231
BLAST of FC929850 vs. ExPASy Swiss-Prot
Match: TBA2_CHICK (Tubulin alpha-2 chain OS=Gallus gallus PE=2 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.489e-43 Identity = 86/226 (38.05%), Postives = 131/226 (57.96%), Query Frame = 2 Query: 83 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEDADECMVLDNEALYDICFQTLS-SPPYFCDLN 757 MRE + + GQ G QIG WE+ C EH I G +S D + ++ E S +YVPRA+++DLEP +D VR+G + +F P+ + G+ A NN+A+GHYT G + +D V D +RK A++C LQGF + H + ++ EY + L F+++P+P+ S VVEPYN+ L+ H +E +D ++DNEA+YDIC + L P + +LN Sbjct: 1 MRECISVHIGQAGVQIGNACWELFCLEHSIQPDGTFS-DPPSSDDSFATFFRETSMSKYVPRAIMVDLEPTVVDEVRTGTYRHLFHPEQLITGKEDAANNYARGHYTVGKDKVDMVSDRIRKLADSCSGLQGFLIFHSFGGGTGSGFTSLLMERLSVEYGKKSKLEFAIYPAPQASSAVVEPYNSVLTTHTTLEHSDCVFMVDNEAIYDICHRNLDIERPTYTNLN 225
BLAST of FC929850 vs. ExPASy Swiss-Prot
Match: TBA_ONCKE (Tubulin alpha chain OS=Oncorhynchus keta PE=2 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 4.333e-43 Identity = 87/219 (39.73%), Postives = 129/219 (58.90%), Query Frame = 2 Query: 110 GQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQL--ERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEDADECMVLDNEALYDICFQTLS-SPPYFCDLN 757 GQ G Q+G WE+ C EHGI G+ D + N +++E G++VPRA+ +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+ID VLD RK A+ C LQGF + H + ++ +Y + L F+V+P+P+VS VVEPYN+ L+ H +E +D ++DNEA+YDIC + L P + +LN Sbjct: 4 GQAGVQMGNACWELYCLEHGIQPDGQMPSDKTCGGGDDSFNTFFSETGAGKHVPRAIFVDLEPTVIDEVRTGIYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDIVLDRTRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLN 222
BLAST of FC929850 vs. ExPASy Swiss-Prot
Match: TBG_EMENI (Tubulin gamma chain OS=Emericella nidulans GN=mipA PE=2 SV=2) HSP 1 Score: 174.096 bits (440), Expect = 7.391e-43 Identity = 80/208 (38.46%), Postives = 128/208 (61.54%), Query Frame = 2 Query: 86 REILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQS--GAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEDADECMVLDNEAL 703 REI+ IQ GQCGN +G++FW+ +C EHGI G + +R +V++ ++ RY+PRA+L+DLEP ++ ++SGP+ I+ P+NF GQ GAGNNW G Y G + + V D++ +EA+ D L+GF H + ++ + +P +++ T+SVFP + +D VV PYN+ L++ +L ++AD +VLDN AL Sbjct: 3 REIITIQAGQCGNNVGSQFWQQLCLEHGISQDGNLEEFATEGGDRKDVFFYQSDDTRYIPRAILLDLEPRVLNGIQSGPYKNIYNPENFFIGQQGIGAGNNWGAG-YAAGEVVQEEVFDMIDREADGSDSLEGFMFLHSIAGGTGSGLGSFLLERMNDRFPKKLIQTYSVFPDTQAADVVVNPYNSLLAMRRLTQNADSVVVLDNAAL 209
BLAST of FC929850 vs. ExPASy Swiss-Prot
Match: TBA1_EMENI (Tubulin alpha-1 chain OS=Emericella nidulans GN=tubA PE=3 SV=2) HSP 1 Score: 174.096 bits (440), Expect = 7.391e-43 Identity = 87/228 (38.16%), Postives = 133/228 (58.33%), Query Frame = 2 Query: 83 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQL--ERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEDADECMVLDNEALYDICFQTLS-SPPYFCDLN 757 MRE++ + GQ G QI WE+ C EHGI G + + + + +++E G+YVPR + DLEP +D VR+G + +F P+N + G+ A NN+A+GHYT G E+ID VLD VR+ A++C LQGF V H + ++ +Y + L F V+P+P+ + +VVEPYN+ L+ H +E +D ++DNEA+YDIC + L P + +LN Sbjct: 1 MREVISLNVGQAGCQIANSCWELYCLEHGIQPDGYLTEERKKEDPDHGFSTFFSETGQGKYVPRTIYADLEPNVVDEVRTGTYRSLFHPENLITGKEDASNNYARGHYTVGKEMIDQVLDKVRRMADSCSGLQGFLVFHSFGGGTGSGFGALLMERLSVDYGKKSKLEFCVYPAPQNATSVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLGIERPSYENLN 228
BLAST of FC929850 vs. ExPASy Swiss-Prot
Match: TBA_SORMA (Tubulin alpha chain OS=Sordaria macrospora GN=TUBA PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.647e-42 Identity = 90/231 (38.96%), Postives = 133/231 (57.58%), Query Frame = 2 Query: 83 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTG-----KYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEDADECMVLDNEALYDICFQTLS-SPPYFCDLN 757 MREI+ + GQ G QI WE+ C EHGI G + + D D + +++E G+YVPR + DLEP +D VR+G + +F P++ + G+ A NN+A+GHYT G ELID VLD VR+ A+NC LQGF V H + ++ +Y + L F V+P+P+ + +VVEPY+ L+ + +E AD ++DNEA+YDIC + L P + +LN Sbjct: 1 MREIISLNVGQAGCQIANSCWELYCLEHGIQPDGYLTEERKAADPD---HGFSTFFSETGNGKYVPRTIYADLEPNVIDEVRTGAYRGLFHPEHMISGKEDASNNYARGHYTVGKELIDQVLDKVRRVADNCSGLQGFLVFHSFGGGTGSGFGALLMERLSVDYGKKSKLEFCVYPAPQTATSVVEPYHNFLTTNTTLEQADCSFMVDNEAIYDICRRNLGLERPNYENLN 228
BLAST of FC929850 vs. ExPASy Swiss-Prot
Match: TBG_CHLRE (Tubulin gamma chain OS=Chlamydomonas reinhardtii GN=TUBG PE=3 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.809e-42 Identity = 84/217 (38.71%), Postives = 135/217 (62.21%), Query Frame = 2 Query: 86 REILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPS-PKVSDTVVEPYNATLSVHQLVEDADECMVLDNEALYDICFQTL 727 REI+++Q GQCGNQ+G++FW +C EHGI G+ + L +R +V++ +A +Y+PRA+L+DLEP ++ +++ +F P+N + GAGNNWA G YT+G + +++LD++ +EAE CD L+GF +CH + I + Y +++ T+SVFP+ + SD VV+PYN+ L++ +L AD +VLDN AL I + L Sbjct: 3 REIINLQVGQCGNQVGSEFWRKLCQEHGIAKDGRLEDFATLGGDRKDVFFYQADDEQYIPRAILLDLEPRVINGIQTSDLRNLFNPENIFISKEGGGAGNNWASG-YTQGEAVQETLLDMIDREAEYCDSLEGFNMCHSIAGGTGSGMGSYMLELISDRYSKKLIQTYSVFPNQSESSDVVVQPYNSLLTLKRLTLHADAVVVLDNTALDKIAVERL 218 The following BLAST results are available for this feature:
BLAST of FC929850 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 422
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929850 ID=FC929850; Name=FC929850; organism=Citrus clementina; type=EST; length=760bpback to top |