FC929850
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929850 vs. ExPASy Swiss-Prot
Match: TBG2_ARATH (Tubulin gamma-2 chain OS=Arabidopsis thaliana GN=TUBG2 PE=2 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.720e-37 Identity = 81/228 (35.53%), Postives = 133/228 (58.33%), Query Frame = 2 Query: 86 REILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSP-KVSDTVVEPYNATLSVHQLVEDADECMVLDNEALYDICFQTLS-SPPYFCDLN 757 REI+ +Q GQCGNQIG +FW+ +C EHGI G + +R +V++ +A Y+PRA+L+DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D++ +EA+ D L+GF +CH + + + Y +++ T+SVFP+ + SD VV+PYN+ L++ +L +AD +VLDN AL I + L + P F N Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIPRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLTNPTFAQTN 229
BLAST of FC929850 vs. ExPASy Swiss-Prot
Match: TBA1_CHICK (Tubulin alpha-1 chain (Fragment) OS=Gallus gallus PE=1 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.720e-37 Identity = 74/182 (40.66%), Postives = 112/182 (61.54%), Query Frame = 2 Query: 215 ERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEDADECMVLDNEALYDICFQTLS-SPPYFCDLN 757 + N +++E G++VPRAV +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+ID VLD +RK A+ C LQGF V H + ++ +Y + L FS++P+ +VS VVEPYN+ L+ H +E +D ++DNEA+YDIC + L P + +LN Sbjct: 8 DSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFSVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPARQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLN 189
BLAST of FC929850 vs. ExPASy Swiss-Prot
Match: TBG_ENCCU (Tubulin gamma chain OS=Encephalitozoon cuniculi GN=TUB4 PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.553e-37 Identity = 79/210 (37.62%), Postives = 128/210 (60.95%), Query Frame = 2 Query: 83 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFP-SPKVSDTVVEPYNATLSVHQLVEDADECMVLDNEAL 703 MRE++ +Q GQCGNQ+GA+FW+ +C EHGI G DL +R +V++ +A +VPRA+L+DLEP + S F ++ GAGNNW G Y G + + V+D++++EAE CD L+ F + H + +I+EE+P +++ T+S+FP + + SD VV+PYN+ L++H+L+E++D +V+DN +L Sbjct: 1 MREVVTLQVGQCGNQMGAEFWKTLCKEHGISMCGVLQDSRDLG-DRKDVFFYQADDNVFVPRAILVDLEPRVISQAPS-----FFSQESIFLSNEGGGAGNNWGHG-YCVGKAMGNDVIDMIQREAEGCDALETFLLLHSIAGGTGSGFGSLLLERIKEEFPKKIVQTYSIFPNNDESSDVVVQPYNSVLTLHRLIENSDCIVVMDNSSL 203
BLAST of FC929850 vs. ExPASy Swiss-Prot
Match: TBG1_ARATH (Tubulin gamma-1 chain OS=Arabidopsis thaliana GN=TUBG1 PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 4.640e-37 Identity = 81/228 (35.53%), Postives = 133/228 (58.33%), Query Frame = 2 Query: 86 REILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSP-KVSDTVVEPYNATLSVHQLVEDADECMVLDNEALYDICFQTLS-SPPYFCDLN 757 REI+ +Q GQCGNQIG +FW+ +C EHGI G + +R +V++ +A Y+PRA+L+DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D++ +EA+ D L+GF +CH + + + Y +++ T+SVFP+ + SD VV+PYN+ L++ +L +AD +VLDN AL I + L + P F N Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIPRALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALGRIAVERLHLTNPTFAQTN 229
BLAST of FC929850 vs. ExPASy Swiss-Prot
Match: TBG_PLAFO (Tubulin gamma chain OS=Plasmodium falciparum (isolate NF54) GN=G-TUB PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.034e-36 Identity = 74/218 (33.94%), Postives = 131/218 (60.09%), Query Frame = 2 Query: 86 REILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFP--SPKVSDTVVEPYNATLSVHQLVEDADECMVLDNEALYDICFQTL 727 REI+ +Q GQCGNQIG +FW+ +C+EH ID G ++ L +R ++++ +A ++P A+L DLEP ++S+++ + ++ P+N + GAGNNW G Y++G ++ + ++D++ +E +N D L+GF + H + + + Y +M+ TFSVFP + + SD VV+PYN+ L++ +L+ D +V+DN +L I + L Sbjct: 3 REIITLQCGQCGNQIGVEFWKQLCNEHNIDQEGILKNNNFLNEDRKDIFFYQADDEHFIPGALLFDLEPRVINSIQTSEYRNLYNPENMFISKEGGGAGNNWGCG-YSQGHKVEEEIIDMIDREVDNSDNLEGFILSHSIAGGTGSGMGSYLLELLNDNYSKKMIQTFSVFPLLTNESSDVVVQPYNSILTLKRLILSTDSVVVIDNTSLNRIFVERL 219
BLAST of FC929850 vs. ExPASy Swiss-Prot
Match: TBG_ANEPH (Tubulin gamma chain OS=Anemia phyllitidis GN=TUBG PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.763e-36 Identity = 81/229 (35.37%), Postives = 133/229 (58.08%), Query Frame = 2 Query: 86 REILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSP-KVSDTVVEPYNATLSVH-QLVEDADECMVLDNEALYDICFQTLSSP-PYFCDLN 757 REI+ +Q GQCGNQIG +FW+ +C EHGI G + +R +V++ +A Y+PRA+L+DLEP ++ +++ + ++ +N GAGNNWA G Y +G ++ + ++D++ +EA+ D L+GF +CH + + + Y +++ T+SVFP+ + SD VV+PYN+ L+++ +L +AD +VLDN AL I L P P F N Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKEGMLEDFATQGGDRKDVFFYQADDEHYIPRALLLDLEPRVINGIQNSEYRNLYNHENVFVADHGGGAGNNWASG-YHQGEQVEEDIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLEALNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLNKRLTINADCVVVLDNTALNRIAVDRLHIPNPTFAQTN 230
BLAST of FC929850 vs. ExPASy Swiss-Prot
Match: TBA1_ENTHI (Tubulin alpha-1 chain OS=Entamoeba histolytica GN=TUB1 PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 5.130e-36 Identity = 80/231 (34.63%), Postives = 128/231 (55.41%), Query Frame = 2 Query: 83 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERI--------NVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEDADECMVLDNEALYDICFQTLS--SPPYF 745 MRE++ I GQ G Q+G K WE+ C EHGI G +S+ + I N ++ E GR+VPRA+ +D EP +D +++G + ++ P++ + G+ A +N+AKG T L++ +D +RK ENC LQGF + + K+ ++Y + L ++PSPK+S VVEPYNA L+ H +++ + ++DNE++Y IC + L SP YF Sbjct: 1 MREVITINIGQAGCQLGNKCWELFCLEHGIQPDGTAIANSNEKRSVITGGIDTAYNAFFQELQNGRHVPRAIFVDTEPTVIDEIKTGEYCGLYHPEHLICGKEDASSNFAKGK-TGYEPLLNQTMDAIRKATENCTGLQGFFIYNSVGGGTGSGFTAALCEKLADKYTKKTKLNTVIWPSPKLSSGVVEPYNAVLNTHAMMKFVNCTFMVDNESIYKICQKQLGVHSPSYF 230
BLAST of FC929850 vs. ExPASy Swiss-Prot
Match: TBG_CANGA (Tubulin gamma chain OS=Candida glabrata GN=TUB4 PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.949e-35 Identity = 80/221 (36.20%), Postives = 124/221 (56.11%), Query Frame = 2 Query: 89 EILHIQGGQCGNQIGAKFWEVICDEHGIDHTG--KYSGD-SDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQS--GAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEDADECMVLDNEALYDICFQTLSSP 736 EI+ IQ GQCGN +G FW + EHGID G KY+ D + ++ + N ++ + + RYVPRA+++DLEP + V+S F +F P N GAGN+W+ G Y G + D ++D++ +E ++ D +GFQ+ H + + + Y + T+SVFPS K S+ VV PYN L++ +L EDAD ++ DN AL ++ +T P Sbjct: 4 EIITIQVGQCGNHVGKYFWNQLLKEHGIDKDGYSKYNDDLTHIREDDTNPFFKQITNNRYVPRAIMIDLEPAAVTDVQSS-FNDLFNPRNTWVSSEGLGAGNSWSTG-YDRGVQNQDRIMDIIDRELDSTDNFEGFQLLHSVAGGTGSGLGSSLLEALTDRYSKSFITTYSVFPS-KQSEVVVGPYNTVLTLRRLCEDADASIIFDNNALLNLTARTFRDP 221
BLAST of FC929850 vs. ExPASy Swiss-Prot
Match: TBG_CAEEL (Tubulin gamma chain OS=Caenorhabditis elegans GN=tbg-1 PE=1 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 5.672e-35 Identity = 77/209 (36.84%), Postives = 122/209 (58.37%), Query Frame = 2 Query: 92 ILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVS-DTVVEPYNATLSVHQLVEDADECMVLDNEALY 706 ++ + GQCGNQ+ FW+ + DEHGI+ G+ + + D+ ++ ++Y +A YVPRAVL+DLEP ++ + P F +F DN GAGNNWA G Y +G E+ + ++D++ +EAEN + L G H + ++RE +P +++ T+SVF + S D VV PYN LS+ +L+E+ D +VLDN AL+ Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDIIIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDVVVHPYNWVLSMQRLIENPDHVVVLDNAALH 213
BLAST of FC929850 vs. ExPASy Swiss-Prot
Match: TBG_RETFI (Tubulin gamma chain OS=Reticulomyxa filosa PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.677e-34 Identity = 77/217 (35.48%), Postives = 127/217 (58.53%), Query Frame = 2 Query: 86 REILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPS-PKVSDTVVEPYNATLSVHQLVEDADECMVLDNEALYDICFQTL 727 REI+ +Q GQCGNQIG +FW + EHGI G + +R +V++ +A Y+PRA+L+DLEP ++S++ F ++ P+N GAGNNWA G YT E + ++D++ +E +N D L+GF + H + ++ + YP +++ T+SVFP+ + S VV PYN+ L++ +L+ +AD +V+DN +L+ I + L Sbjct: 3 REIITLQVGQCGNQIGTEFWGRLIAEHGIGPDGIVKEFATEGTDRKDVFFYQADDQHYIPRALLIDLEPRVINSLQESEFKNLWNPENVYIDSQGGGAGNNWAVG-YTHATEKYEHIMDMIDRE-DNSDSLEGFVLTHSIAGGTGSGFGSHMLEQLTDRYPKKIIQTYSVFPNDSERSSVVVHPYNSVLALKRLILNADAVVVIDNTSLHRIADERL 217 The following BLAST results are available for this feature:
BLAST of FC929850 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 422
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929850 ID=FC929850; Name=FC929850; organism=Citrus clementina; type=EST; length=760bpback to top |