FC929850
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929850 vs. ExPASy Swiss-Prot
Match: TBB2B_BOVIN (Tubulin beta-2B chain OS=Bos taurus GN=TUBB2B PE=1 SV=2) HSP 1 Score: 372.474 bits (955), Expect = 1.416e-102 Identity = 180/227 (79.30%), Postives = 195/227 (85.90%), Query Frame = 2 Query: 83 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEDADECMVLDNEALYDICFQTLS-SPPYFCDLNH 760 MREI+HIQ GQCGNQIGAKFWEVI DEHGID TG Y GDSDLQLERINVYYNEA+G +YVPRA+L+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+CDCLQGFQ+ H ISKIREEYPDR+M TFSV PSPKVSDTVVEPYNATLSVHQLVE+ DE +DNEALYDICF+TL + P + DLNH Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNH 227
BLAST of FC929850 vs. ExPASy Swiss-Prot
Match: TBB_PIG (Tubulin beta chain OS=Sus scrofa PE=1 SV=1) HSP 1 Score: 372.089 bits (954), Expect = 1.849e-102 Identity = 180/227 (79.30%), Postives = 195/227 (85.90%), Query Frame = 2 Query: 83 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEDADECMVLDNEALYDICFQTLS-SPPYFCDLNH 760 MREI+HIQ GQCGNQIGAKFWEVI DEHGID TG Y GDSDLQLERINVYYNEA+G +YVPRA+L+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+CDCLQGFQ+ H ISKIREEYPDR+M TFSV PSPKVSDTVVEPYNATLSVHQLVE+ DE +DNEALYDICF+TL + P + DLNH Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEAAGNKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNH 227
BLAST of FC929850 vs. ExPASy Swiss-Prot
Match: TBB7_CHICK (Tubulin beta-7 chain OS=Gallus gallus PE=2 SV=1) HSP 1 Score: 372.089 bits (954), Expect = 1.849e-102 Identity = 180/227 (79.30%), Postives = 196/227 (86.34%), Query Frame = 2 Query: 83 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEDADECMVLDNEALYDICFQTLS-SPPYFCDLNH 760 MREI+HIQ GQCGNQIGAKFWEVI DEHGID TG Y GDSDLQL+RI+VYYNEA+GG+YVPRA+L+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+CDCLQGFQ+ H ISKIREEYPDR+M TFSV PSPKVSDTVVEPYNATLSVHQLVE+ DE +DNEALYDICF+TL + P + DLNH Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNH 227
BLAST of FC929850 vs. ExPASy Swiss-Prot
Match: TBB5_XENTR (Tubulin beta chain OS=Xenopus tropicalis GN=tubb PE=2 SV=1) HSP 1 Score: 372.089 bits (954), Expect = 1.849e-102 Identity = 180/227 (79.30%), Postives = 196/227 (86.34%), Query Frame = 2 Query: 83 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEDADECMVLDNEALYDICFQTLS-SPPYFCDLNH 760 MREI+HIQ GQCGNQIGAKFWEVI DEHGID TG Y GDSDLQL+RI+VYYNEA+GG+YVPRA+L+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+CDCLQGFQ+ H ISKIREEYPDR+M TFSV PSPKVSDTVVEPYNATLSVHQLVE+ DE +DNEALYDICF+TL + P + DLNH Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNH 227
BLAST of FC929850 vs. ExPASy Swiss-Prot
Match: TBB5_XENLA (Tubulin beta chain OS=Xenopus laevis GN=tubb PE=2 SV=1) HSP 1 Score: 372.089 bits (954), Expect = 1.849e-102 Identity = 180/227 (79.30%), Postives = 196/227 (86.34%), Query Frame = 2 Query: 83 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEDADECMVLDNEALYDICFQTLS-SPPYFCDLNH 760 MREI+HIQ GQCGNQIGAKFWEVI DEHGID TG Y GDSDLQL+RI+VYYNEA+GG+YVPRA+L+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+CDCLQGFQ+ H ISKIREEYPDR+M TFSV PSPKVSDTVVEPYNATLSVHQLVE+ DE +DNEALYDICF+TL + P + DLNH Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNH 227
BLAST of FC929850 vs. ExPASy Swiss-Prot
Match: TBB5_RAT (Tubulin beta-5 chain OS=Rattus norvegicus GN=Tubb5 PE=1 SV=1) HSP 1 Score: 372.089 bits (954), Expect = 1.849e-102 Identity = 180/227 (79.30%), Postives = 196/227 (86.34%), Query Frame = 2 Query: 83 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEDADECMVLDNEALYDICFQTLS-SPPYFCDLNH 760 MREI+HIQ GQCGNQIGAKFWEVI DEHGID TG Y GDSDLQL+RI+VYYNEA+GG+YVPRA+L+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+CDCLQGFQ+ H ISKIREEYPDR+M TFSV PSPKVSDTVVEPYNATLSVHQLVE+ DE +DNEALYDICF+TL + P + DLNH Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNH 227
BLAST of FC929850 vs. ExPASy Swiss-Prot
Match: TBB5_PONAB (Tubulin beta chain OS=Pongo abelii GN=TUBB PE=2 SV=1) HSP 1 Score: 372.089 bits (954), Expect = 1.849e-102 Identity = 180/227 (79.30%), Postives = 196/227 (86.34%), Query Frame = 2 Query: 83 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEDADECMVLDNEALYDICFQTLS-SPPYFCDLNH 760 MREI+HIQ GQCGNQIGAKFWEVI DEHGID TG Y GDSDLQL+RI+VYYNEA+GG+YVPRA+L+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+CDCLQGFQ+ H ISKIREEYPDR+M TFSV PSPKVSDTVVEPYNATLSVHQLVE+ DE +DNEALYDICF+TL + P + DLNH Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNH 227
BLAST of FC929850 vs. ExPASy Swiss-Prot
Match: TBB5_PIG (Tubulin beta chain OS=Sus scrofa GN=TUBB PE=2 SV=1) HSP 1 Score: 372.089 bits (954), Expect = 1.849e-102 Identity = 180/227 (79.30%), Postives = 196/227 (86.34%), Query Frame = 2 Query: 83 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEDADECMVLDNEALYDICFQTLS-SPPYFCDLNH 760 MREI+HIQ GQCGNQIGAKFWEVI DEHGID TG Y GDSDLQL+RI+VYYNEA+GG+YVPRA+L+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+CDCLQGFQ+ H ISKIREEYPDR+M TFSV PSPKVSDTVVEPYNATLSVHQLVE+ DE +DNEALYDICF+TL + P + DLNH Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNH 227
BLAST of FC929850 vs. ExPASy Swiss-Prot
Match: TBB5_PANTR (Tubulin beta chain OS=Pan troglodytes GN=TUBB PE=3 SV=1) HSP 1 Score: 372.089 bits (954), Expect = 1.849e-102 Identity = 180/227 (79.30%), Postives = 196/227 (86.34%), Query Frame = 2 Query: 83 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEDADECMVLDNEALYDICFQTLS-SPPYFCDLNH 760 MREI+HIQ GQCGNQIGAKFWEVI DEHGID TG Y GDSDLQL+RI+VYYNEA+GG+YVPRA+L+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+CDCLQGFQ+ H ISKIREEYPDR+M TFSV PSPKVSDTVVEPYNATLSVHQLVE+ DE +DNEALYDICF+TL + P + DLNH Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNH 227
BLAST of FC929850 vs. ExPASy Swiss-Prot
Match: TBB5_MOUSE (Tubulin beta-5 chain OS=Mus musculus GN=Tubb5 PE=1 SV=1) HSP 1 Score: 372.089 bits (954), Expect = 1.849e-102 Identity = 180/227 (79.30%), Postives = 196/227 (86.34%), Query Frame = 2 Query: 83 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVEDADECMVLDNEALYDICFQTLS-SPPYFCDLNH 760 MREI+HIQ GQCGNQIGAKFWEVI DEHGID TG Y GDSDLQL+RI+VYYNEA+GG+YVPRA+L+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+CDCLQGFQ+ H ISKIREEYPDR+M TFSV PSPKVSDTVVEPYNATLSVHQLVE+ DE +DNEALYDICF+TL + P + DLNH Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNH 227 The following BLAST results are available for this feature:
BLAST of FC929850 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 422
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929850 ID=FC929850; Name=FC929850; organism=Citrus clementina; type=EST; length=760bpback to top |