FC929854

Overview
NameFC929854
Unique NameFC929854
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929854 vs. ExPASy Swiss-Prot
Match: FOLD_STRP3 (Bifunctional protein folD OS=Streptococcus pyogenes serotype M3 GN=folD PE=3 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 7.770e-52
Identity = 108/214 (50.47%), Postives = 144/214 (67.29%), Query Frame = 3
Query:   72 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQSMMI 713
            +IDGKA+AQ ++ E+A +V  L +K G VPGLAV++VG    SQ YV  K +A   VG KS  + L E + + ELI+ +   NA   +HGILVQLPLP HIN++K++  I  +KDVDGFHP+N G L   GR PL +PCTP G +ELL+   V ++GK AV++GRSNIVG P++ LLL  +ATVT+ HS T   E + R AD++I A GQ   I
Sbjct:    4 LIDGKALAQKMQQELAAKVNNLKQKKGIVPGLAVILVGDDPASQVYVRNKERAALTVGFKSETVRLSEFICQEELIAVIERYNADNTIHGILVQLPLPNHINDKKIILAIDPKKDVDGFHPMNTGHL-WSGR-PLMVPCTPSGIMELLREYNVNLEGKHAVIIGRSNIVGKPMAQLLLDKNATVTLTHSRTRQLEEVCRCADVLIVAIGQGHFI 215          
BLAST of FC929854 vs. ExPASy Swiss-Prot
Match: FOLD_STRP1 (Bifunctional protein folD OS=Streptococcus pyogenes serotype M1 GN=folD PE=3 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 7.770e-52
Identity = 108/214 (50.47%), Postives = 144/214 (67.29%), Query Frame = 3
Query:   72 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQSMMI 713
            +IDGKA+AQ ++ E+A +V  L +K G VPGLAV++VG    SQ YV  K +A   VG KS  + L E + + ELI+ +   NA   +HGILVQLPLP HIN++K++  I  +KDVDGFHP+N G L   GR PL +PCTP G +ELL+   V ++GK AV++GRSNIVG P++ LLL  +ATVT+ HS T   E + R AD++I A GQ   I
Sbjct:    4 LIDGKALAQKMQQELAAKVNNLKQKKGIVPGLAVILVGDDPASQVYVRNKERAALTVGFKSETVRLSEFICQEELIAVIERYNADNTIHGILVQLPLPNHINDKKIILAIDPKKDVDGFHPMNTGHL-WSGR-PLMVPCTPSGIMELLREYNVNLEGKHAVIIGRSNIVGKPMAQLLLDKNATVTLTHSRTRQLEEVCRCADVLIVAIGQGHFI 215          
BLAST of FC929854 vs. ExPASy Swiss-Prot
Match: FOLD_CAMHC (Bifunctional protein folD OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=folD PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.015e-51
Identity = 108/215 (50.23%), Postives = 145/215 (67.44%), Query Frame = 3
Query:   72 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQSMMIK 716
            +IDGKA++  ++ E+  E   L+EK G VP LAV++VG  K SQ+YV+ K KAC   GI+S    L    SE+ LI  +  LN   +V GILVQLPLPKHI+E K+L +IS EKDVDGFH +N+G+L + G D  F+PCTP G + L K   + I GK AVV+GRSNIVG P++ LLL A+ATVT+ HS T +   I ++ADI++ A G+   +K
Sbjct:    3 LIDGKAISAKVKEEVKNEAAQLTEK-GVVPCLAVILVGDDKASQTYVNSKEKACKACGIRSLKYTLEANTSESALIDLIQSLNENDEVDGILVQLPLPKHIDENKILEKISCEKDVDGFHAVNVGRL-VSGLDG-FVPCTPCGIMRLFKEYDIEISGKNAVVIGRSNIVGKPMANLLLNANATVTVTHSKTQNLAKITKDADIIVVAIGKPNFLK 214          
BLAST of FC929854 vs. ExPASy Swiss-Prot
Match: FOLD_ANADF (Bifunctional protein folD OS=Anaeromyxobacter sp. (strain Fw109-5) GN=folD PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.015e-51
Identity = 115/215 (53.49%), Postives = 142/215 (66.05%), Query Frame = 3
Query:   72 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQSMMIK 716
            IIDGK +A  +R E+AE VR L    G  PGL+VV VG    S  YV  KRK C EVGI+S +  LP  VS+A+L++ V  LNA P VHGILVQLPLPKH++E  VL  I   KD DGFHP N+G L++ G      PCTP G + LL  + V  KGKRA+VVGRSNIVG P++ +LL+  ATVTI HS T D    V  ADIV+AA G++ +I+
Sbjct:    2 IIDGKLIAAKVRGEVAEAVRALKAS-GVAPGLSVVRVGDDPASAIYVRGKRKDCEEVGIRSDEHHLPATVSQADLLALVARLNADPTVHGILVQLPLPKHLDERAVLDAIDPRKDSDGFHPFNVGALSI-GIPGTPRPCTPAGVMRLLDEARVDPKGKRAIVVGRSNIVGKPMAAMLLERHATVTIAHSRTQDLAGEVARADIVVAAIGKAELIR 214          
BLAST of FC929854 vs. ExPASy Swiss-Prot
Match: FOLD_EXIS2 (Bifunctional protein folD OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=folD PE=3 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.731e-51
Identity = 111/216 (51.39%), Postives = 143/216 (66.20%), Query Frame = 3
Query:   66 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQSMMI 713
            A +IDGK VAQ+ R ++ EEV  L E+  + P L V+++G    SQSYV  K KA  E+G+ S  I LPE+  E+EL+  +  LNA   VHGILVQLPLPKHI+E KV+  I+ EKDVDGFHP+++GK+ +   +P FLPCTP G L L+K   V I G+  VVVGRS IVG PV +L L   ATVT  HS T D  ++ R+ADI+I A G   +I
Sbjct:    2 AVVIDGKQVAQSYRLKLKEEVARLKEERIQ-PKLTVILIGEDPASQSYVRGKEKAAQEIGMDSDLIRLPEETKESELLHLIERLNADASVHGILVQLPLPKHIDESKVIFAIAPEKDVDGFHPVSVGKMMI--GEPTFLPCTPNGILHLVKEMNVPIAGRHVVVVGRSQIVGKPVGMLFLNESATVTYCHSKTADLGAMTRQADILIVAVGVPKLI 214          
BLAST of FC929854 vs. ExPASy Swiss-Prot
Match: FOLD_BURCC (Bifunctional protein folD OS=Burkholderia cenocepacia (strain MC0-3) GN=folD PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.261e-51
Identity = 107/212 (50.47%), Postives = 146/212 (68.87%), Query Frame = 3
Query:   66 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQ 701
            A +IDG A+++T+R++ AE    L+ + G  PGLAV++VG    S+ YV  K KAC + G  S     P  +SEA+L++++HELN  P +HGILVQLPLP HI+  KV+  I+ EKDVDGFH  N G L M G+ PLF PCTP G +++ +  G+ ++G  AVV+GRSNIVG P++++LL A ATVTI HS T D  +  READIV+AA G+
Sbjct:    3 ALLIDGNALSKTLRAQAAERAAALTAR-GHQPGLAVILVGANPASEVYVRNKIKACEDNGFFSLKDAYPATLSEADLLARIHELNRDPKIHGILVQLPLPAHIDSHKVIEAIAPEKDVDGFHVANAGAL-MTGK-PLFRPCTPYGVMKMFEAHGIALQGANAVVIGRSNIVGKPMAMMLLDAGATVTICHSKTRDLAAHTREADIVVAAVGK 211          
BLAST of FC929854 vs. ExPASy Swiss-Prot
Match: FOLD_ACIBL (Bifunctional protein folD OS=Acidobacteria bacterium (strain Ellin345) GN=folD PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.261e-51
Identity = 110/216 (50.93%), Postives = 146/216 (67.59%), Query Frame = 3
Query:   66 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQSMMI 713
            ATI+DG  ++  I++E+A EV  L  K G  PGLAVV+VG    S+ YV  K KAC   GI S     P+ VS A+L+  V  LN   D+ GILVQLPLPK ++ +K+L  +S EKDVDGFHP+N+G L+     P  +PCTP GC+E+L+RS V ++G  AVVVGRS+IVG P+++LL  A+ATVTI HS T D  ++ R ADI++AA G+  MI
Sbjct:    3 ATILDGNKISAEIKTEVAAEVAELKAK-GLTPGLAVVLVGHNPASEIYVRNKVKACEMTGIYSEQHTPPDTVSTADLLQLVESLNRRNDIDGILVQLPLPKQVDSKKILLAVSPEKDVDGFHPMNVGYLSTV--RPGLVPCTPAGCMEILRRSNVPVEGADAVVVGRSDIVGKPIAMLLTNANATVTICHSKTHDLPAVCRRADILVAAIGRPGMI 215          
BLAST of FC929854 vs. ExPASy Swiss-Prot
Match: FOLD1_PSEMY (Bifunctional protein folD 1 OS=Pseudomonas mendocina (strain ymp) GN=folD1 PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.261e-51
Identity = 108/217 (49.77%), Postives = 145/217 (66.82%), Query Frame = 3
Query:   66 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQSMMIK 716
            A +IDGKA+A ++R +IA+ V    ++  + PGLAV++VG    SQ YVS KRK C EVG  S   DLP + S+A+L++ + ELN  P + GILVQLPLP+H++   +L  I  +KDVDGFHP NIG+LA   R PL  PCTPKG + LL+ +G  + G  AVVVG SNIVG P+++ LL A  TVT+ H  T D    V +ADIV+ AAG+  ++K
Sbjct:    3 AQLIDGKAIAASLRQQIAQRVAERRQQGLRAPGLAVILVGTDPASQVYVSHKRKDCEEVGFLSRAYDLPAETSQADLLALIDELNEDPTIDGILVQLPLPEHLDSSLLLERIRPDKDVDGFHPYNIGRLAQ--RMPLLRPCTPKGIMTLLESTGADLYGMHAVVVGASNIVGRPMAMELLLAGCTVTVTHRFTKDLAGHVGQADIVVVAAGKPGLVK 217          
BLAST of FC929854 vs. ExPASy Swiss-Prot
Match: FOLD_ACIF5 (Bifunctional protein folD OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=folD PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.953e-51
Identity = 106/213 (49.77%), Postives = 144/213 (67.61%), Query Frame = 3
Query:   75 IDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQSMMI 713
            IDGKA+AQ I ++I+        ++G+ PGLAVV+VG    S+ YV  KR+ CA VGI SF  +LP   +  +L++ + ELN    V GILVQLPLP H + E+++  I++EKDVDGFHP NIG+LA+  R PL   CTP G + LL+ SG+ IKGK AV+VG SNIVG P++L LL A ATVT+ H  T D  + V  A++++AAAG+  +I
Sbjct:    6 IDGKAIAQKIHADISLRSHAFLRQWGRSPGLAVVLVGADPASRIYVQKKRETCASVGIASFSANLPADTNPQQLLAHIGELNVNDAVDGILVQLPLPPHFDPEEIIEAIAVEKDVDGFHPYNIGRLAL--RAPLLRSCTPAGIMTLLQESGIDIKGKEAVIVGASNIVGRPMALELLLAGATVTVCHRFTRDLAAHVGRAELLVAAAGKPGLI 216          
BLAST of FC929854 vs. ExPASy Swiss-Prot
Match: FOLD_ACIF2 (Bifunctional protein folD OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=folD PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.953e-51
Identity = 106/213 (49.77%), Postives = 144/213 (67.61%), Query Frame = 3
Query:   75 IDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQSMMI 713
            IDGKA+AQ I ++I+        ++G+ PGLAVV+VG    S+ YV  KR+ CA VGI SF  +LP   +  +L++ + ELN    V GILVQLPLP H + E+++  I++EKDVDGFHP NIG+LA+  R PL   CTP G + LL+ SG+ IKGK AV+VG SNIVG P++L LL A ATVT+ H  T D  + V  A++++AAAG+  +I
Sbjct:    6 IDGKAIAQKIHADISLRSHAFLRQWGRSPGLAVVLVGADPASRIYVQKKRETCASVGIASFSANLPADTNPQQLLAHIGELNVNDAVDGILVQLPLPPHFDPEEIIEAIAVEKDVDGFHPYNIGRLAL--RAPLLRSCTPAGIMTLLQESGIDIKGKEAVIVGASNIVGRPMALELLLAGATVTVCHRFTRDLAAHVGRAELLVAAAGKPGLI 216          
The following BLAST results are available for this feature:
BLAST of FC929854 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FOLD_STRP37.770e-5250.47Bifunctional protein folD OS=Streptococcus pyogene... [more]
FOLD_STRP17.770e-5250.47Bifunctional protein folD OS=Streptococcus pyogene... [more]
FOLD_CAMHC1.015e-5150.23Bifunctional protein folD OS=Campylobacter hominis... [more]
FOLD_ANADF1.015e-5153.49Bifunctional protein folD OS=Anaeromyxobacter sp. ... [more]
FOLD_EXIS21.731e-5151.39Bifunctional protein folD OS=Exiguobacterium sibir... [more]
FOLD_BURCC2.261e-5150.47Bifunctional protein folD OS=Burkholderia cenocepa... [more]
FOLD_ACIBL2.261e-5150.93Bifunctional protein folD OS=Acidobacteria bacteri... [more]
FOLD1_PSEMY2.261e-5149.77Bifunctional protein folD 1 OS=Pseudomonas mendoci... [more]
FOLD_ACIF52.953e-5149.77Bifunctional protein folD OS=Acidithiobacillus fer... [more]
FOLD_ACIF22.953e-5149.77Bifunctional protein folD OS=Acidithiobacillus fer... [more]

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Properties
Property NameValue
Genbank descriptionC34001B06EF PostHarvC1 Citrus clementina cDNA clone C34001B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929854 ID=FC929854; Name=FC929854; organism=Citrus clementina; type=EST; length=717bp
GGAGCAATTAATTAGAGTTATCCATCTCTAGTTCTAGAATAATGGCGGCA
CCGTCAGATCAGAAGGCCACCATAATCGACGGCAAAGCCGTCGCTCAGAC
CATCCGATCTGAAATCGCAGAAGAAGTCCGCCTCCTTTCTGAAAAATATG
GCAAGGTGCCTGGACTGGCAGTAGTAATAGTGGGTGGCAGAAAAGACTCT
CAAAGCTATGTGAGCATGAAGAGAAAGGCTTGTGCTGAAGTTGGGATTAA
GTCTTTTGACATAGACCTCCCCGAGCAAGTCTCCGAGGCCGAGCTTATCA
GCAAGGTTCACGAGCTTAACGCAATGCCTGATGTACATGGTATATTGGTT
CAACTTCCATTGCCGAAGCATATAAATGAAGAGAAAGTTTTAGGTGAGAT
AAGCCTTGAGAAGGATGTTGATGGCTTTCATCCTTTGAACATTGGCAAGC
TCGCAATGAAAGGCAGAGACCCCCTCTTCCTTCCTTGCACGCCCAAGGGA
TGCCTTGAACTTCTGAAACGAAGTGGTGTTACTATAAAGGGTAAAAGGGC
TGTTGTGGTGGGTCGAAGTAACATTGTTGGACTCCCAGTTTCATTGCTGC
TGCTGAAAGCTGATGCCACTGTAACCATAGTCCATTCACATACCCCTGAT
CCTGAAAGTATCGTTCGTGAAGCTGACATTGTTATTGCTGCAGCCGGACA
AAGCATGATGATCAAGG
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