FC929854

Overview
NameFC929854
Unique NameFC929854
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929854 vs. ExPASy Swiss-Prot
Match: FOLD_BACC3 (Bifunctional protein folD OS=Bacillus cereus (strain 03BB102) GN=folD PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.465e-50
Identity = 107/216 (49.54%), Postives = 147/216 (68.06%), Query Frame = 3
Query:   66 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQSMMI 713
            A II G  VA+  R+++ EEV  L E+ G VPGLAV++VG    S+SYV  K K C +VGI S  I+ PE ++E  L++++  LN    ++GILVQLPLPKHI E+ ++  IS EKDVDGFHP+++G++ M G+D  FLPCTP G +EL+K + + I GK  VV+GRSNIVG PV  L L  +ATVT  HS T + + + + ADI+I A G+  M+
Sbjct:    3 AVIIKGNEVAEKKRAQLKEEVVKLKEQ-GIVPGLAVILVGEDPASRSYVKGKEKGCEQVGIYSELIEFPETITEERLLAEIDRLNGDDRINGILVQLPLPKHIEEKAIIERISPEKDVDGFHPISVGRM-MTGQD-TFLPCTPHGIVELVKETNLDISGKHVVVIGRSNIVGKPVGQLFLNENATVTYCHSKTQNMKELTKLADILIVAVGRPKMV 215          
BLAST of FC929854 vs. ExPASy Swiss-Prot
Match: FOLD_BACC0 (Bifunctional protein folD OS=Bacillus cereus (strain AH820) GN=folD PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.465e-50
Identity = 107/216 (49.54%), Postives = 147/216 (68.06%), Query Frame = 3
Query:   66 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQSMMI 713
            A II G  VA+  R+++ EEV  L E+ G VPGLAV++VG    S+SYV  K K C +VGI S  I+ PE ++E  L++++  LN    ++GILVQLPLPKHI E+ ++  IS EKDVDGFHP+++G++ M G+D  FLPCTP G +EL+K + + I GK  VV+GRSNIVG PV  L L  +ATVT  HS T + + + + ADI+I A G+  M+
Sbjct:    3 AVIIKGNEVAEKKRAQLKEEVVKLKEQ-GIVPGLAVILVGEDPASRSYVKGKEKGCEQVGIYSELIEFPETITEERLLAEIDRLNGDDRINGILVQLPLPKHIEEKAIIERISPEKDVDGFHPISVGRM-MTGQD-TFLPCTPHGIVELVKETNLDISGKHVVVIGRSNIVGKPVGQLFLNENATVTYCHSKTQNMKELTKLADILIVAVGRPKMV 215          
BLAST of FC929854 vs. ExPASy Swiss-Prot
Match: FOLD_BACAN (Bifunctional protein folD OS=Bacillus anthracis GN=folD PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.465e-50
Identity = 107/216 (49.54%), Postives = 147/216 (68.06%), Query Frame = 3
Query:   66 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQSMMI 713
            A II G  VA+  R+++ EEV  L E+ G VPGLAV++VG    S+SYV  K K C +VGI S  I+ PE ++E  L++++  LN    ++GILVQLPLPKHI E+ ++  IS EKDVDGFHP+++G++ M G+D  FLPCTP G +EL+K + + I GK  VV+GRSNIVG PV  L L  +ATVT  HS T + + + + ADI+I A G+  M+
Sbjct:    3 AVIIKGNEVAEKKRAQLKEEVVKLKEQ-GIVPGLAVILVGEDPASRSYVKGKEKGCEQVGIYSELIEFPETITEERLLAEIDRLNGDDRINGILVQLPLPKHIEEKAIIERISPEKDVDGFHPISVGRM-MTGQD-TFLPCTPHGIVELVKETNLDISGKHVVVIGRSNIVGKPVGQLFLNENATVTYCHSKTQNMKELTKLADILIVAVGRPKMV 215          
BLAST of FC929854 vs. ExPASy Swiss-Prot
Match: FOLD_BACAH (Bifunctional protein folD OS=Bacillus thuringiensis (strain Al Hakam) GN=folD PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.465e-50
Identity = 107/216 (49.54%), Postives = 147/216 (68.06%), Query Frame = 3
Query:   66 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQSMMI 713
            A II G  VA+  R+++ EEV  L E+ G VPGLAV++VG    S+SYV  K K C +VGI S  I+ PE ++E  L++++  LN    ++GILVQLPLPKHI E+ ++  IS EKDVDGFHP+++G++ M G+D  FLPCTP G +EL+K + + I GK  VV+GRSNIVG PV  L L  +ATVT  HS T + + + + ADI+I A G+  M+
Sbjct:    3 AVIIKGNEVAEKKRAQLKEEVVKLKEQ-GIVPGLAVILVGEDPASRSYVKGKEKGCEQVGIYSELIEFPETITEERLLAEIDRLNGDDRINGILVQLPLPKHIEEKAIIERISPEKDVDGFHPISVGRM-MTGQD-TFLPCTPHGIVELVKETNLDISGKHVVVIGRSNIVGKPVGQLFLNENATVTYCHSKTQNMKELTKLADILIVAVGRPKMV 215          
BLAST of FC929854 vs. ExPASy Swiss-Prot
Match: FOLD_BACAC (Bifunctional protein folD OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=folD PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.465e-50
Identity = 107/216 (49.54%), Postives = 147/216 (68.06%), Query Frame = 3
Query:   66 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQSMMI 713
            A II G  VA+  R+++ EEV  L E+ G VPGLAV++VG    S+SYV  K K C +VGI S  I+ PE ++E  L++++  LN    ++GILVQLPLPKHI E+ ++  IS EKDVDGFHP+++G++ M G+D  FLPCTP G +EL+K + + I GK  VV+GRSNIVG PV  L L  +ATVT  HS T + + + + ADI+I A G+  M+
Sbjct:    3 AVIIKGNEVAEKKRAQLKEEVVKLKEQ-GIVPGLAVILVGEDPASRSYVKGKEKGCEQVGIYSELIEFPETITEERLLAEIDRLNGDDRINGILVQLPLPKHIEEKAIIERISPEKDVDGFHPISVGRM-MTGQD-TFLPCTPHGIVELVKETNLDISGKHVVVIGRSNIVGKPVGQLFLNENATVTYCHSKTQNMKELTKLADILIVAVGRPKMV 215          
BLAST of FC929854 vs. ExPASy Swiss-Prot
Match: FOLD_BACAA (Bifunctional protein folD OS=Bacillus anthracis (strain A0248) GN=folD PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.465e-50
Identity = 107/216 (49.54%), Postives = 147/216 (68.06%), Query Frame = 3
Query:   66 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQSMMI 713
            A II G  VA+  R+++ EEV  L E+ G VPGLAV++VG    S+SYV  K K C +VGI S  I+ PE ++E  L++++  LN    ++GILVQLPLPKHI E+ ++  IS EKDVDGFHP+++G++ M G+D  FLPCTP G +EL+K + + I GK  VV+GRSNIVG PV  L L  +ATVT  HS T + + + + ADI+I A G+  M+
Sbjct:    3 AVIIKGNEVAEKKRAQLKEEVVKLKEQ-GIVPGLAVILVGEDPASRSYVKGKEKGCEQVGIYSELIEFPETITEERLLAEIDRLNGDDRINGILVQLPLPKHIEEKAIIERISPEKDVDGFHPISVGRM-MTGQD-TFLPCTPHGIVELVKETNLDISGKHVVVIGRSNIVGKPVGQLFLNENATVTYCHSKTQNMKELTKLADILIVAVGRPKMV 215          
BLAST of FC929854 vs. ExPASy Swiss-Prot
Match: FOLD_ACTSZ (Bifunctional protein folD OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=folD PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.465e-50
Identity = 105/214 (49.07%), Postives = 141/214 (65.89%), Query Frame = 3
Query:   72 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQSMMI 713
            +I G  +A+  +SE+A ++R       +VPGLAV++VG    SQ YV  KRK+CAE+GI S   DLPE  +EAEL+S + +LN  P+V GILVQLPLPKHI+  KV+  I+  KDVDGFHP N+G+L    R P    CTP G ++LL+ +G  + G  AV+VG SNIVG P+++ LL A  TVT+ H  T D E  VR ADI++ A G++  I
Sbjct:    5 VISGTELAKKTKSEVAGQIRRYISLGRRVPGLAVILVGSDPASQVYVGSKRKSCAEIGIDSKSYDLPETTTEAELLSIIDDLNRNPNVDGILVQLPLPKHIDSTKVIERIAPNKDVDGFHPYNVGRLCQ--RIPTLRACTPYGIMKLLETTGQDLHGLHAVIVGASNIVGRPMAMELLLAGCTVTVTHRFTRDLEEHVRRADILVVAVGKAEFI 216          
BLAST of FC929854 vs. ExPASy Swiss-Prot
Match: FOLD_STAES (Bifunctional protein folD OS=Staphylococcus epidermidis (strain ATCC 12228) GN=folD PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.914e-50
Identity = 104/216 (48.15%), Postives = 152/216 (70.37%), Query Frame = 3
Query:   66 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQSMMI 713
            A I+DGK +A+  R  +  +V  L E YG  P L+V++VG    SQSYV  K+KA  ++G+ S  I L E  SE  ++S+++ LN    V GILVQ+PLPK ++E+KVL  I+ EKDVDGFHP+NIGKL +   +  F+PCTP G +E+LK + + ++GK AVV+GRS+IVG PVS LLL+A+ATVTI+HS T +  + +++AD++++A GQ  ++
Sbjct:    3 AKILDGKQIAKEYRQRLKNQVNDLKE-YGFTPKLSVILVGNDGASQSYVKSKKKAAEKIGMISEIIHLDESTSEEVVLSELNRLNNDDTVSGILVQVPLPKQVSEQKVLEAINPEKDVDGFHPINIGKLYID--EQTFVPCTPLGIMEILKHADINLEGKNAVVIGRSHIVGQPVSKLLLQANATVTILHSRTKNMNAHLKQADVIVSAVGQPGLV 215          
BLAST of FC929854 vs. ExPASy Swiss-Prot
Match: FOLD_STAEQ (Bifunctional protein folD OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=folD PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.914e-50
Identity = 104/216 (48.15%), Postives = 152/216 (70.37%), Query Frame = 3
Query:   66 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQSMMI 713
            A I+DGK +A+  R  +  +V  L E YG  P L+V++VG    SQSYV  K+KA  ++G+ S  I L E  SE  ++S+++ LN    V GILVQ+PLPK ++E+KVL  I+ EKDVDGFHP+NIGKL +   +  F+PCTP G +E+LK + + ++GK AVV+GRS+IVG PVS LLL+A+ATVTI+HS T +  + +++AD++++A GQ  ++
Sbjct:    3 AKILDGKQIAKEYRQRLKNQVNDLKE-YGFTPKLSVILVGNDGASQSYVKSKKKAAEKIGMISEIIHLDESTSEEVVLSELNRLNNDDTVSGILVQVPLPKQVSEQKVLEAINPEKDVDGFHPINIGKLYID--EQTFVPCTPLGIMEILKHADINLEGKNAVVIGRSHIVGQPVSKLLLQANATVTILHSRTKNMNAHLKQADVIVSAVGQPGLV 215          
BLAST of FC929854 vs. ExPASy Swiss-Prot
Match: FOLD_SILST (Bifunctional protein folD OS=Silicibacter sp. (strain TM1040) GN=folD PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.914e-50
Identity = 107/216 (49.54%), Postives = 141/216 (65.28%), Query Frame = 3
Query:   66 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQSMMI 713
            A IIDGKA A  +R ++ E V  L E++G  PGLAVV+VG    SQ YV  K K   EVG+ S++  L    SEA+L++ + +LN   +VHGILVQLPLPKH++E+ V+  I+ EKDVDGFH  N+G L    +    +PCTP GCL +L+    ++ G  AVV+GRSNIVG P++ LLL    TVTI HS T D   +VR ADIV+AA G+  M+
Sbjct:    3 AEIIDGKAFAAKVRGQVTEHVTRLKEEHGITPGLAVVLVGEDPASQVYVRSKGKQTVEVGMNSYEHKLDADTSEADLLALIDQLNKDSEVHGILVQLPLPKHLDEDLVINSIAPEKDVDGFHISNVGLLGTGQKS--MVPCTPLGCLMMLRDYHGSLSGLDAVVIGRSNIVGKPMAQLLLGDSCTVTIAHSRTKDLPEVVRRADIVVAAVGRPEMV 216          
The following BLAST results are available for this feature:
BLAST of FC929854 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FOLD_BACC31.465e-5049.54Bifunctional protein folD OS=Bacillus cereus (stra... [more]
FOLD_BACC01.465e-5049.54Bifunctional protein folD OS=Bacillus cereus (stra... [more]
FOLD_BACAN1.465e-5049.54Bifunctional protein folD OS=Bacillus anthracis GN... [more]
FOLD_BACAH1.465e-5049.54Bifunctional protein folD OS=Bacillus thuringiensi... [more]
FOLD_BACAC1.465e-5049.54Bifunctional protein folD OS=Bacillus anthracis (s... [more]
FOLD_BACAA1.465e-5049.54Bifunctional protein folD OS=Bacillus anthracis (s... [more]
FOLD_ACTSZ1.465e-5049.07Bifunctional protein folD OS=Actinobacillus succin... [more]
FOLD_STAES1.914e-5048.15Bifunctional protein folD OS=Staphylococcus epider... [more]
FOLD_STAEQ1.914e-5048.15Bifunctional protein folD OS=Staphylococcus epider... [more]
FOLD_SILST1.914e-5049.54Bifunctional protein folD OS=Silicibacter sp. (str... [more]

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Properties
Property NameValue
Genbank descriptionC34001B06EF PostHarvC1 Citrus clementina cDNA clone C34001B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929854 ID=FC929854; Name=FC929854; organism=Citrus clementina; type=EST; length=717bp
GGAGCAATTAATTAGAGTTATCCATCTCTAGTTCTAGAATAATGGCGGCA
CCGTCAGATCAGAAGGCCACCATAATCGACGGCAAAGCCGTCGCTCAGAC
CATCCGATCTGAAATCGCAGAAGAAGTCCGCCTCCTTTCTGAAAAATATG
GCAAGGTGCCTGGACTGGCAGTAGTAATAGTGGGTGGCAGAAAAGACTCT
CAAAGCTATGTGAGCATGAAGAGAAAGGCTTGTGCTGAAGTTGGGATTAA
GTCTTTTGACATAGACCTCCCCGAGCAAGTCTCCGAGGCCGAGCTTATCA
GCAAGGTTCACGAGCTTAACGCAATGCCTGATGTACATGGTATATTGGTT
CAACTTCCATTGCCGAAGCATATAAATGAAGAGAAAGTTTTAGGTGAGAT
AAGCCTTGAGAAGGATGTTGATGGCTTTCATCCTTTGAACATTGGCAAGC
TCGCAATGAAAGGCAGAGACCCCCTCTTCCTTCCTTGCACGCCCAAGGGA
TGCCTTGAACTTCTGAAACGAAGTGGTGTTACTATAAAGGGTAAAAGGGC
TGTTGTGGTGGGTCGAAGTAACATTGTTGGACTCCCAGTTTCATTGCTGC
TGCTGAAAGCTGATGCCACTGTAACCATAGTCCATTCACATACCCCTGAT
CCTGAAAGTATCGTTCGTGAAGCTGACATTGTTATTGCTGCAGCCGGACA
AAGCATGATGATCAAGG
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