FC929855

Overview
NameFC929855
Unique NameFC929855
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11050 contig Ccv1_Contig11050:765..1476. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAOX_HUMAN (NADP-dependent malic enzyme OS=Homo sapiens GN=ME1 PE=1 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 5.690e-63
Identity = 128/236 (54.24%), Postives = 160/236 (67.80%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEY-GDNVFVPGQ 709
            G EY + L EFM AV   YG   LIQFEDF N NAF LL KY   +  FNDDIQGTASV +AGL++A++     L+DQ  LF GAGEA  GIA LI + + K+  +P E+  KKIWLVDSKGLIV  R  SL   K+ +AHEHE +K L   V  IKPT LIG +  G  F++++++ MA+ NE+PIIF+LSNPTS++EC+AE+ Y  ++GRAIFASGSPFDP          PGQ
Sbjct:  218 GSEYDDFLDEFMEAVSSKYGMNCLIQFEDFANVNAFRLLNKYRNQYCTFNDDIQGTASVAVAGLLAALRITKNKLSDQTILFQGAGEAALGIAHLIVMALEKE-GLPKEKAIKKIWLVDSKGLIVKGR-ASLTQEKEKFAHEHEEMKNLEAIVQEIKPTALIGVAAIGGAFSEQILKDMAAFNERPIIFALSNPTSKAECSAEQCYKITKGRAIFASGSPFDPVTLPNGQTLYPGQ 451          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAOM_HUMAN (NAD-dependent malic enzyme, mitochondrial OS=Homo sapiens GN=ME2 PE=1 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 7.431e-63
Identity = 120/237 (50.63%), Postives = 164/237 (69.20%), Query Frame = 2
Query:    8 QEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE-HEPVKE-LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGD-NVFVPGQ 709
            Q+Y +L+ EFM A+   YG   LIQFEDF NHNAF  L KY   +  FNDDIQGTA+V LAGL++A K +   +++ + LFLGAGEA  GIA LI + +  +  +  +E +KKIW+ D  GL+V  R   +  +++P+ H   E + +   DAVN +KP+ +IG +G GR FT +V+ AMAS+NE+P+IF+LSNPT+Q+ECTAEEAYT ++GR +FASGSPF P +  D  VF PGQ
Sbjct:  229 QQYDDLIDEFMKAITDRYGRNTLIQFEDFGNHNAFRFLRKYREKYCTFNDDIQGTAAVALAGLLAAQKVISKPISEHKILFLGAGEAALGIANLIVMSM-VENGLSEQEAQKKIWMFDKYGLLVKGRKAKIDSYQEPFTHSAPESIPDTFEDAVNILKPSTIIGVAGAGRLFTPDVIRAMASINERPVIFALSNPTAQAECTAEEAYTLTEGRCLFASGSPFGPVKLTDGRVFTPGQ 464          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAOX_RAT (NADP-dependent malic enzyme OS=Rattus norvegicus GN=Me1 PE=1 SV=2)

HSP 1 Score: 239.58 bits (610), Expect = 1.268e-62
Identity = 129/236 (54.66%), Postives = 159/236 (67.37%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGD-NVFVPGQ 709
            G EY   L EFM A    YG   LIQFEDF N NAF LL KY   +  FNDDIQGTASV +AGL++A++     L+DQ  LF GAGEA  GIA LI + + K+  +  E+ R+KIWLVDSKGLIV  R  SL   K+ +AHEHE +K L   V  IKPT LIG +  G  FT+++++ MA+ NE+PIIF+LSNPTS++EC+AEE Y  ++GRAIFASGSPFDP    D     PGQ
Sbjct:  218 GPEYDAFLDEFMEAASSKYGMNCLIQFEDFANLNAFRLLNKYRNKYCTFNDDIQGTASVAVAGLLAALRITKNKLSDQTVLFQGAGEAALGIAHLIVMAMEKE-GLSKEKARQKIWLVDSKGLIVKGRA-SLTEEKEVFAHEHEEMKNLEAIVQKIKPTALIGVAAIGGAFTEQILKDMAAFNERPIIFALSNPTSKAECSAEECYKVTKGRAIFASGSPFDPVTLPDGRTLFPGQ 451          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAOX_MOUSE (NADP-dependent malic enzyme OS=Mus musculus GN=Me1 PE=1 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 2.824e-62
Identity = 127/236 (53.81%), Postives = 158/236 (66.95%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGD-NVFVPGQ 709
            G EY   L EFM A    YG   LIQFEDF N NAF LL KY   +  FNDDIQGTASV +AGL++A++     L+DQ  LF GAGEA  GIA L+ + + K+  +  E  RKKIWLVDSKGLIV  R  SL   K+ +AHEHE +K L   V  IKPT LIG +  G  FT+++++ MA+ NE+PIIF+LS+PTS++EC+A+E Y  ++GRAIFASGSPFDP    D     PGQ
Sbjct:  218 GPEYDAFLDEFMEAASSKYGMNCLIQFEDFANRNAFRLLNKYRNKYCTFNDDIQGTASVAVAGLLAALRITKNKLSDQTVLFQGAGEAALGIAHLVVMAMEKE-GLSKENARKKIWLVDSKGLIVKGR-ASLTEEKEVFAHEHEEMKNLEAIVQKIKPTALIGVAAIGGAFTEQILKDMAAFNERPIIFALSSPTSKAECSADECYKVTKGRAIFASGSPFDPVTLPDGRTLFPGQ 451          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAOX_COLLI (NADP-dependent malic enzyme OS=Columba livia GN=ME1 PE=1 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 8.216e-62
Identity = 126/236 (53.39%), Postives = 160/236 (67.80%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEY-GDNVFVPGQ 709
            GQ Y +LL EFM AV   YG   LIQFEDF N NAF LL KY   +  FNDDIQGTASV +AGL++A++     L+D   LF GAGEA  GIA LI + + K+  +  EE  K+IW+VDSKGLIV  R  SL   K+ +AHEH  +K L D V  IKPT+LIG +  G  FT+++++ MA+ N++PIIF+LSNPTS++ECTAE+ Y +++GR IFASGSPFDP          PGQ
Sbjct:  207 GQAYDDLLDEFMEAVTSRYGMNCLIQFEDFANANAFRLLHKYRNKYCTFNDDIQGTASVAVAGLLAALRITKNRLSDHTVLFQGAGEAALGIANLIVMAMQKE-GVSKEEAIKRIWMVDSKGLIVKGR-ASLTPEKEHFAHEHCEMKNLEDIVKDIKPTVLIGVAAIGGAFTQQILQDMAAFNKRPIIFALSNPTSKAECTAEQLYKYTEGRGIFASGSPFDPVTLPSGQTLYPGQ 440          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAOM_MOUSE (NAD-dependent malic enzyme, mitochondrial OS=Mus musculus GN=Me2 PE=2 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 8.216e-62
Identity = 121/238 (50.84%), Postives = 165/238 (69.33%), Query Frame = 2
Query:    8 QEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH---EHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGD-NVFVPGQ 709
            Q Y +L+ EFM A+   YG   LIQFEDF NHNAF  L KY   +  FNDDIQGTA+V L+GL++A + +   +++ + LFLGAGEA  GIA LI L +  ++ +  EE ++KIW+ D  GL+V  R  S+   ++P+AH   E  P     DAVN +KP+++IG +G G  FT  V++AMAS+NE+PIIF+LSNPT+Q+ECTAE+AYT ++GR +FASGSPF+P +  D  VF PGQ
Sbjct:  229 QLYDDLMDEFMKAITDRYGRNTLIQFEDFGNHNAFRFLRKYQQKYCTFNDDIQGTAAVALSGLLAAQRVINKPVSEHKILFLGAGEAALGIANLIVLSMV-ESGLSEEEAQRKIWMFDKSGLLVKGRTASIDSNQEPYAHAAPESIPAT-FEDAVNKLKPSVIIGVAGAGPLFTHGVIKAMASINERPIIFALSNPTAQAECTAEDAYTLTEGRCLFASGSPFEPVKLQDGRVFTPGQ 464          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAOX_ANAPL (NADP-dependent malic enzyme OS=Anas platyrhynchos GN=ME1 PE=1 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 1.073e-61
Identity = 126/236 (53.39%), Postives = 158/236 (66.95%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEY-GDNVFVPGQ 709
            GQ Y +LL EFM AV   YG   LIQFEDF N NAF LL KY   +  FNDDIQGTASV +AGL++A++     L+D   LF GAGEA  GIA LI + + K+  +  E   K+IW+VDSKGLIV  R  SL   K  +AHEH  +K L D V  IKP++LIG +  G  FTKE+++ MA+ N++PIIF+LSNPTS++ECTAE+ Y +++GR IFASGSPFDP          PGQ
Sbjct:  207 GQAYDDLLDEFMEAVTSRYGMNCLIQFEDFANANAFRLLHKYRNKYCTFNDDIQGTASVAVAGLLAALRITKNRLSDHTVLFQGAGEAALGIANLIVMAMEKE-GVSKEAAVKRIWMVDSKGLIVKGRA-SLTAEKTRFAHEHAEMKNLEDIVKDIKPSVLIGVAAIGGAFTKEILQDMAAFNKRPIIFALSNPTSKAECTAEQCYKYTEGRGIFASGSPFDPVTLPNGKTLYPGQ 440          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAON_HUMAN (NADP-dependent malic enzyme, mitochondrial OS=Homo sapiens GN=ME3 PE=2 SV=2)

HSP 1 Score: 224.557 bits (571), Expect = 4.220e-58
Identity = 116/236 (49.15%), Postives = 157/236 (66.53%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGD-NVFVPGQ 709
            G+ Y +LL EFM AV   +G   LIQFEDF N NAF LL KY   + +FNDDIQGTASV +AG+++A++     L++  F+F GAGEA  GIA L+ + + K+  +P  E  +KIW+VDSKGLIV  R   L H K+ +A +H  V  L + V  +KPT +IG +     FT++++  MAS +E+PIIF+LSNPTS++ECTAE+ Y  ++GR IFASGSPF      D   F+PGQ
Sbjct:  253 GKAYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCMFNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKE-GVPKAEATRKIWMVDSKGLIVKGR-SHLNHEKEMFAQDHPEVNSLEEVVRLVKPTAIIGVAAIAGAFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGKTFIPGQ 486          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAON_MOUSE (NADP-dependent malic enzyme, mitochondrial OS=Mus musculus GN=Me3 PE=1 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.228e-57
Identity = 116/236 (49.15%), Postives = 156/236 (66.10%), Query Frame = 2
Query:    5 GQEYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGD-NVFVPGQ 709
            G+EY +LL EFM AV   +G   LIQFEDF N NAF LL KY   + +FNDDIQGTASV +AG+++A++     L++  F+F GA EA  GIA L+ + + K+  +P  E  KKIW+VDSKGLIV  R   L H K+ +A +H  V  L + V  +KPT +IG +     FT++++  MAS +E+PI+F+LSNPTS++ECTAE+ Y  ++GR IFASGSPF      D   F PGQ
Sbjct:  253 GEEYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYCMFNDDIQGTASVAVAGILAALRITKNRLSNHVFVFQGADEAAMGIAHLLVMALEKE-GIPKTEAIKKIWMVDSKGLIVKGR-SHLNHEKEMFAQDHPEVNSLEEVVRLVKPTAIIGVAAIAGAFTEQILRDMASFHERPIVFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLEDGRTFTPGQ 486          
BLAST of FC929855 vs. ExPASy Swiss-Prot
Match: MAOX_DICDI (NADP-dependent malic enzyme OS=Dictyostelium discoideum GN=malA PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 4.665e-57
Identity = 112/235 (47.66%), Postives = 158/235 (67.23%), Query Frame = 2
Query:   11 EYAELLHEFMTAVKQNYGERILIQFEDFVNHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEP--VKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQ 709
            EY  L+ EF+ A    +  ++++QFED  N + F+LL++Y   +L FNDDIQGT SV+L+G I+A++ +   + + R +FLGAG AG G+A+ I + +  +  +  EE RK  W VDSKGLI ++R + L   KK +A E     +K L++ V  +KPT +IG SG G +F++EV+E MA   EKPI+F+LSNPT+ +ECTAE+AY W+ GR IFASGSPF P EY    FVPGQ
Sbjct:  210 EYYPLVDEFLAAAFNKW-PKVIVQFEDISNDHCFNLLDEYRNKYLCFNDDIQGTGSVILSGFINAVRSVQKPIKEHRMVFLGAGSAGIGVADCI-MSLFDEAGVSKEEARKSFWFVDSKGLITTTRGDELTSQKKQYAREDYTYQLKSLLEVVRDVKPTAIIGLSGIGGSFSQEVIEEMAKHVEKPIVFALSNPTTNAECTAEQAYQWTDGRCIFASGSPFKPVEYKGKTFVPGQ 442          
The following BLAST results are available for this feature:
BLAST of FC929855 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
MAOX_HUMAN5.690e-6354.24NADP-dependent malic enzyme OS=Homo sapiens GN=ME1... [more]
MAOM_HUMAN7.431e-6350.63NAD-dependent malic enzyme, mitochondrial OS=Homo ... [more]
MAOX_RAT1.268e-6254.66NADP-dependent malic enzyme OS=Rattus norvegicus G... [more]
MAOX_MOUSE2.824e-6253.81NADP-dependent malic enzyme OS=Mus musculus GN=Me1... [more]
MAOX_COLLI8.216e-6253.39NADP-dependent malic enzyme OS=Columba livia GN=ME... [more]
MAOM_MOUSE8.216e-6250.84NAD-dependent malic enzyme, mitochondrial OS=Mus m... [more]
MAOX_ANAPL1.073e-6153.39NADP-dependent malic enzyme OS=Anas platyrhynchos ... [more]
MAON_HUMAN4.220e-5849.15NADP-dependent malic enzyme, mitochondrial OS=Homo... [more]
MAON_MOUSE1.228e-5749.15NADP-dependent malic enzyme, mitochondrial OS=Mus ... [more]
MAOX_DICDI4.665e-5747.66NADP-dependent malic enzyme OS=Dictyostelium disco... [more]

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Properties
Property NameValue
Genbank descriptionC34001B07EF PostHarvC1 Citrus clementina cDNA clone C34001B07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929855 ID=FC929855; Name=FC929855; organism=Citrus clementina; type=EST; length=712bp
TATTGGTCAGGAATATGCTGAACTGCTACATGAATTCATGACAGCTGTGA
AGCAGAATTATGGGGAGAGAATTCTCATTCAGTTTGAAGACTTTGTAAAC
CACAATGCCTTTGATCTGCTTGAAAAATATGGCACTACTCATCTTGTTTT
CAATGATGATATTCAGGGGACAGCATCTGTGGTCCTTGCAGGTCTTATTT
CAGCGATGAAATTTCTTGGAGGAAGCTTAGCCGACCAAAGATTTTTATTC
CTTGGTGCAGGAGAAGCTGGCACTGGAATAGCAGAACTCATAGCTCTTGA
GATATCCAAACAGACAAATATGCCGCTAGAAGAGACTCGCAAGAAGATTT
GGCTTGTGGATTCAAAGGGATTGATCGTCAGTTCCCGTTTAGAATCTCTC
CAACATTTCAAAAAGCCGTGGGCTCATGAACATGAACCTGTTAAGGAACT
AGTAGATGCCGTTAATGCAATCAAGCCAACAATTCTGATTGGAACATCAG
GACAAGGTCGAACATTTACTAAAGAAGTTGTTGAGGCTATGGCCTCCTTG
AATGAGAAACCCATTATTTTTTCTCTTTCCAACCCAACTTCACAGTCTGA
ATGCACCGCAGAAGAAGCCTATACGTGGAGCCAGGGCCGAGCCATTTTTG
CAAGTGGGAGCCCCTTTGACCCTTTCGAATATGGGGACAATGTTTTTGTG
CCTGGCCAGGCA
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