FC929861

Overview
NameFC929861
Unique NameFC929861
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length705
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig13920 contig Ccv1_Contig13920:33..737. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929861 vs. ExPASy Swiss-Prot
Match: CPR3_ARATH (Probable cysteine proteinase At4g11310 OS=Arabidopsis thaliana GN=At4g11310 PE=2 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.020e-52
Identity = 103/218 (47.25%), Postives = 147/218 (67.43%), Query Frame = 1
Query:   55 MGLFRSPTMAMFL-LFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDN 705
            MG  +S  + + + + + + ++A+DMS+VSYD  +   S     D E   +FE+W+VKHGK Y ++ EKE+R  IF++NLRFI+  N+EN +Y++GL  FADL+  EY+ +  GA     R  +    S+RY     + LP SVDWR +GAV EVKDQG C SCWAFST+ AVEG+NKIVTG L++LSEQ+L++C+   N GC GG ++ A+EFI+ N
Sbjct:    1 MGSAKSAMLILLVAMVIASCATAIDMSVVSYDDNNRLHSVF---DAEASLIFESWMVKHGKVYGSVAEKERRLTIFEDNLRFINNRNAENLSYRLGLTGFADLSLHEYKEVCHGADPRPPRNHVFMTSSDRYKTSADDVLPKSVDWRNEGAVTEVKDQGHCRSCWAFSTVGAVEGLNKIVTGELVTLSEQDLINCNKE-NNGCGGGKLETAYEFIMKN 214          
BLAST of FC929861 vs. ExPASy Swiss-Prot
Match: ORYB_ORYSJ (Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2)

HSP 1 Score: 198.364 bits (503), Expect = 3.225e-50
Identity = 106/214 (49.53%), Postives = 146/214 (68.22%), Query Frame = 1
Query:   85 MFLLFLFTVSSALDMSIVSYDKTHESKS-SSWRTDDEVMAMFEAWLVKHGKAY-NALG-EKEKRFEIFKENLRFIDEHNS---ENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTS-YNEGCNGGLMDYAFEFIIDN 705
            + LL +   ++A DMSI+SY+  H ++      T+ E  A ++ WL ++G    NALG E E+RF +F +NL+F+D HN+   E   +++G+NRFADLTNEE+R+  LGA+   +  +       RY     E LP+SVDWR+KGAVA VK+QG CGSCWAFS ++ VE IN++VTG +I+LSEQELV+C T+  N GCNGGLMD AF+FII N
Sbjct:   11 LLLLIVGAATAAPDMSIISYNAEHGARGLEEGPTEAEARAAYDLWLAENGGGSPNALGGEHERRFLVFWDNLKFVDAHNARADERGGFRLGMNRFADLTNEEFRATFLGAKVAERSRAA----GERYRHDGVEELPESVDWREKGAVAPVKNQGQCGSCWAFSAVSTVESINQLVTGEMITLSEQELVECSTNGQNSGCNGGLMDDAFDFIIKN 220          
BLAST of FC929861 vs. ExPASy Swiss-Prot
Match: CPR2_ARATH (Probable cysteine proteinase At3g43960 OS=Arabidopsis thaliana GN=At3g43960 PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.213e-50
Identity = 102/198 (51.52%), Postives = 140/198 (70.71%), Query Frame = 1
Query:  121 LDMSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSE-NRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVA-EVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDT-SYNEGCNGGLMDYAFEFIIDN 705
            L + ++S      + + S R + EV+ M+E WLV++GK YN LGEKE+RF+IFK+NL+ I+EHNS+ NR+Y+ GLN+F+DLT +E+++ +LG +   K  S     + RY  + G+ LPD VDWR++GAV   VK QG CGSCWAF+   AVEGIN+I TG L+SLSEQEL+DCD  + N GC GG   +AFEFI +N
Sbjct:   13 LSVLLISISLGVVTATESQRNEGEVLTMYEQWLVENGKNYNGLGEKERRFKIFKDNLKRIEEHNSDPNRSYERGLNKFSDLTADEFQASYLGGKMEKKSLS---DVAERYQYKEGDVLPDEVDWRERGAVVPRVKRQGECGSCWAFAATGAVEGINQITTGELVSLSEQELIDCDRGNDNFGCAGGGAVWAFEFIKEN 207          
BLAST of FC929861 vs. ExPASy Swiss-Prot
Match: CYSP_HEMSP (Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN102 PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.601e-49
Identity = 100/204 (49.02%), Postives = 134/204 (65.69%), Query Frame = 1
Query:  103 FTVSSALDMSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSE-NRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTS--LKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDN 705
            F   + + +S +S  ++         ++D +  ++E W   H  A + L EK +RF +FKEN++FI E N + +  YK+ LN+F D+TN+E+RS + G++    R+   ++    +     VG     S+DWR KGAV  VKDQG CGSCWAFSTIA+VEGIN+I TG L+SLSEQELVDCDTSYNEGCNGGLMDYAFEFI  N
Sbjct:    6 FIALALVALSFLSIAQSIPFTEKDLASEDSLWNLYEKWRTHHTVARD-LDEKNRRFNVFKENVKFIHEFNQKKDAPYKLALNKFGDMTNQEFRSKYAGSKIQHHRSQRGIQKNTGSFMYENVGSLPAASIDWRAKGAVTGVKDQGQCGSCWAFSTIASVEGINQIKTGELVSLSEQELVDCDTSYNEGCNGGLMDYAFEFIQKN 208          
BLAST of FC929861 vs. ExPASy Swiss-Prot
Match: CYSEP_RICCO (Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 8.784e-48
Identity = 98/200 (49.00%), Postives = 128/200 (64.00%), Query Frame = 1
Query:  100 LFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSN-RYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFI 696
            L  +S AL ++I      HE +  S   ++ +  ++E W   H     +L EK+KRF +FK N   +   N  ++ YK+ LN+FAD+TN E+R+ + G++    R      R N  ++    + +P SVDWRKKGAV  VKDQG CGSCWAFSTI AVEGIN+I T  L+SLSEQELVDCDT  N+GCNGGLMDYAFEFI
Sbjct:    6 LLALSLALVLAITESFDFHEKELES---EESLWGLYERWR-SHHTVSRSLHEKQKRFNVFKHNAMHVHNANKMDKPYKLKLNKFADMTNHEFRNTYSGSKVKHHRMFRGGPRGNGTFMYEKVDTVPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTDQNQGCNGGLMDYAFEFI 201          
BLAST of FC929861 vs. ExPASy Swiss-Prot
Match: CYSP1_ORYSJ (Cysteine protease 1 OS=Oryza sativa subsp. japonica GN=CP1 PE=2 SV=2)

HSP 1 Score: 186.422 bits (472), Expect = 1.268e-46
Identity = 110/226 (48.67%), Postives = 139/226 (61.50%), Query Frame = 1
Query:   79 MAMFLLFL--FTVSSALD----MSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKH------GKAYNALGEKEKRFEIFKENLRFIDEHNS---ENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAV-AEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDC-DTSYNEGCNGGLMDYAFEFIIDN 705
            MA FLL L  F   +A      MSI+ Y+  H  +    RT+ E  A ++ WL +H      G     +GE E+RF +F +NL+F+D HN+   E   +++G+NRFADLTN E+R+ +LG     +   +       Y     EALPDSVDWR KGAV A VK+QG CGSCWAFS +AAVEGINKIVTG L+SLSEQELV+C     N GCNGG+MD AF FI  N
Sbjct:   15 MACFLLILAAFAPPAAAAPPDIMSIIRYNAEHGVRGLE-RTEAEARAAYDLWLARHRRGGGGGSRNGFIGEHERRFRVFWDNLKFVDAHNARADERGGFRLGMNRFADLTNGEFRATYLGTTPAGRGRRV----GEAYRHDGVEALPDSVDWRDKGAVVAPVKNQGQCGSCWAFSAVAAVEGINKIVTGELVSLSEQELVECARNGQNSGCNGGIMDDAFAFIARN 235          
BLAST of FC929861 vs. ExPASy Swiss-Prot
Match: CYSEP_VIGMU (Vignain OS=Vigna mungo PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 3.690e-46
Identity = 97/207 (46.86%), Postives = 131/207 (63.29%), Query Frame = 1
Query:   79 MAMFLLFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKR-SNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFI 696
            MAM  L    +S +L + + +    HE    S   ++ +  ++E W   H     +LGEK KRF +FK N+  +   N  ++ YK+ LN+FAD+TN E+RS + G++    +    S+  S  ++     ++P SVDWRKKGAV +VKDQG CGSCWAFSTI AVEGIN+I T  L+SLSEQELVDCD   N+GCNGGLM+ AFEFI
Sbjct:    1 MAMKKLLWVVLSLSLVLGVANSFDFHEKDLES---EESLWDLYERWR-SHHTVSRSLGEKHKRFNVFKANVMHVHNTNKMDKPYKLKLNKFADMTNHEFRSTYAGSKVNHHKMFRGSQHGSGTFMYEKVGSVPASVDWRKKGAVTDVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDKEENQGCNGGLMESAFEFI 203          
BLAST of FC929861 vs. ExPASy Swiss-Prot
Match: CYSEP_PHAVU (Vignain OS=Phaseolus vulgaris PE=2 SV=2)

HSP 1 Score: 182.57 bits (462), Expect = 1.832e-45
Identity = 94/205 (45.85%), Postives = 129/205 (62.93%), Query Frame = 1
Query:   85 MFLLFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSN-RYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFI 696
            ++++  F++   +  S   +DK   S+ S W        ++E W   H     +LGEK KRF +FK NL  +   N  ++ YK+ LN+FAD+TN E+RS + G++    R    +   N  ++     ++P SVDWRKKGAV +VKDQG CGSCWAFST+ AVEGIN+I T  L++LSEQELVDCD   N+GCNGGLM+ AFEFI
Sbjct:    7 LWVVLSFSLVLGVANSFDFHDKDLASEESLWD-------LYERWR-SHHTVSRSLGEKHKRFNVFKANLMHVHNTNKMDKPYKLKLNKFADMTNHEFRSTYAGSKVNHPRMFRGTPHENGAFMYEKVVSVPPSVDWRKKGAVTDVKDQGQCGSCWAFSTVVAVEGINQIKTNKLVALSEQELVDCDKEENQGCNGGLMESAFEFI 203          
BLAST of FC929861 vs. ExPASy Swiss-Prot
Match: PAPA3_CARPA (Caricain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 179.874 bits (455), Expect = 1.187e-44
Identity = 91/204 (44.61%), Postives = 128/204 (62.75%), Query Frame = 1
Query:   94 LFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDN 705
            LF+    S  D SIV Y +   + +      + ++ +F +W++ H K Y  + EK  RFEIFK+NL +IDE N +N +Y +GLN FADL+N+E+   ++G+   A   +++      ++      LP++VDWRKKGAV  V+ QGSCGSCWAFS +A VEGINKI TG L+ LSEQELVDC+   + GC GG   YA E++  N
Sbjct:   17 LFVHMSVSFGDFSIVGYSQDDLTST------ERLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKKNNSYWLGLNEFADLSNDEFNEKYVGSLIDA---TIEQSYDEEFINEDTVNLPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCERR-SHGCKGGYPPYALEYVAKN 210          
BLAST of FC929861 vs. ExPASy Swiss-Prot
Match: PAPA2_CARPA (Chymopapain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 176.022 bits (445), Expect = 1.714e-43
Identity = 85/174 (48.85%), Postives = 124/174 (71.26%), Query Frame = 1
Query:  187 DEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKR-TSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDN 705
            + ++ +F++W++KH K Y ++ EK  RFEIF++NL +IDE N +N +Y +GLN FADL+N+E++  ++G  F A+  T L+   +  +  +     P S+DWR KGAV  VK+QG+CGSCWAFSTIA VEGINKIVTG+L+ LSEQELVDCD  ++ GC GG    + +++ +N
Sbjct:   42 ERLIQLFDSWMLKHNKIYESIDEKIYRFEIFRDNLMYIDETNKKNNSYWLGLNGFADLSNDEFKKKYVG--FVAEDFTGLEHFDNEDFTYKHVTNYPQSIDWRAKGAVTPVKNQGACGSCWAFSTIATVEGINKIVTGNLLELSEQELVDCD-KHSYGCKGGYQTTSLQYVANN 212          
The following BLAST results are available for this feature:
BLAST of FC929861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
CPR3_ARATH2.020e-5247.25Probable cysteine proteinase At4g11310 OS=Arabidop... [more]
ORYB_ORYSJ3.225e-5049.53Oryzain beta chain OS=Oryza sativa subsp. japonica... [more]
CPR2_ARATH4.213e-5051.52Probable cysteine proteinase At3g43960 OS=Arabidop... [more]
CYSP_HEMSP1.601e-4949.02Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN10... [more]
CYSEP_RICCO8.784e-4849.00Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1[more]
CYSP1_ORYSJ1.268e-4648.67Cysteine protease 1 OS=Oryza sativa subsp. japonic... [more]
CYSEP_VIGMU3.690e-4646.86Vignain OS=Vigna mungo PE=1 SV=1[more]
CYSEP_PHAVU1.832e-4545.85Vignain OS=Phaseolus vulgaris PE=2 SV=2[more]
PAPA3_CARPA1.187e-4444.61Caricain OS=Carica papaya PE=1 SV=2[more]
PAPA2_CARPA1.714e-4348.85Chymopapain OS=Carica papaya PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionC34001C01EF PostHarvC1 Citrus clementina cDNA clone C34001C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929861 ID=FC929861; Name=FC929861; organism=Citrus clementina; type=EST; length=705bp
CATCAATCCATCTTCTTCTCCCAAAAAGAAAAAAAAAAGTTCTTTTCTCA
AAAGATGGGTTTGTTTAGATCACCAACCATGGCCATGTTTTTACTTTTTC
TCTTCACTGTTTCATCTGCCTTGGACATGTCGATTGTATCTTATGATAAA
ACCCATGAGTCAAAATCTAGCAGCTGGAGGACCGACGATGAGGTTATGGC
TATGTTCGAGGCCTGGCTCGTGAAGCATGGCAAGGCTTATAACGCTTTGG
GTGAAAAAGAGAAGAGGTTTGAGATCTTTAAGGAAAATCTTAGGTTTATT
GATGAACATAACTCAGAGAACCGGACCTACAAGGTTGGGTTGAACCGGTT
TGCTGATTTGACCAACGAGGAGTACCGGTCCATGCATCTGGGTGCACGCT
TTGGTGCTAAAAGGACTTCCTTGAAATCAAAGAGGAGCAACCGTTATCTG
CCACGTGTCGGCGAGGCGTTGCCGGACTCTGTTGATTGGAGGAAGAAAGG
AGCTGTCGCTGAAGTTAAAGATCAAGGAAGCTGTGGGAGTTGCTGGGCAT
TTTCAACCATTGCAGCTGTAGAGGGTATAAACAAGATTGTTACAGGTAGC
CTGATCTCACTATCCGAGCAGGAGTTGGTGGATTGTGATACATCATATAA
TGAAGGATGTAATGGTGGTTTGATGGACTATGCATTCGAGTTCATTATTG
ATAAT
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