FC929861

Overview
NameFC929861
Unique NameFC929861
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length705
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig13920 contig Ccv1_Contig13920:33..737. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929861 vs. ExPASy Swiss-Prot
Match: CATV_GVXN (Viral cathepsin OS=Xestia c-nigrum granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.532e-28
Identity = 80/215 (37.21%), Postives = 119/215 (55.35%), Query Frame = 1
Query:   85 MFLLFLFTVS----SALDMSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYL-PRV--GEA---LPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFII 699
            MFL ++F V+    +   +S ++YD ++  +            +F  ++VK+ K Y    EKE RFEIFK+NL  I+  N+   +    +N  AD+++ E     L    G K + ++ ++ N +  P V  G++   +PDS DWR + +V  VK Q  CGSCWAFS +A +E +  I     + LSEQ+LVDCD   N GCNGGLM +AFE II
Sbjct:   11 MFLPWVFCVALLTLNVCAVSYIAYDMSNAQE------------LFNEFVVKYNKVYKDDQEKEARFEIFKQNLADINARNALEDSAMFEINSRADISSNEL----LQKLTGLKLSLMRGEKKNSFCTPTVISGDSSGKVPDSFDWRDRNSVTSVKMQKECGSCWAFSAVANIESLYHIKHNVSLDLSEQQLVDCD-KVNNGCNGGLMSWAFEGII 208          
BLAST of FC929861 vs. ExPASy Swiss-Prot
Match: CATL2_HUMAN (Cathepsin L2 OS=Homo sapiens GN=CTSL2 PE=1 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 5.919e-28
Identity = 75/179 (41.90%), Postives = 99/179 (55.31%), Query Frame = 1
Query:  184 DDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVG----LNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDN 705
            D  +   +  W   H + Y A  E+  R  ++++N++ I+ HN E    K G    +N F D+TNEE+R M +G     K    K  R   +L      LP SVDWRKKG V  VK+Q  CGSCWAFS   A+EG     TG L+SLSEQ LVDC     N+GCNGG M  AF+++ +N
Sbjct:   22 DQNLDTKWYQWKATHRRLYGA-NEEGWRRAVWEKNMKMIELHNGEYSQGKHGFTMAMNAFGDMTNEEFRQM-MGCFRNQKFRKGKVFREPLFLD-----LPKSVDWRKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGFMARAFQYVKEN 193          
BLAST of FC929861 vs. ExPASy Swiss-Prot
Match: CATK_RABIT (Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.919e-28
Identity = 69/171 (40.35%), Postives = 97/171 (56.73%), Query Frame = 1
Query:  205 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDN 705
            +E W   + K YN+  ++  R  I+++NL+ I  HN E      TY++ +N   D+T+EE      G +    R+         Y+P      PDS+D+RKKG V  VK+QG CGSCWAFS++ A+EG  K  TG L++LS Q LVDC  S N GC GG M  AF+++  N
Sbjct:   26 WELWKKTYSKQYNSKVDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPPSRSH---SNDTLYIPDWEGRTPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-VSENYGCGGGYMTNAFQYVQRN 192          
BLAST of FC929861 vs. ExPASy Swiss-Prot
Match: CYSP2_HOMAM (Digestive cysteine proteinase 2 OS=Homarus americanus GN=LCP2 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 7.731e-28
Identity = 71/168 (42.26%), Postives = 102/168 (60.71%), Query Frame = 1
Query:  223 KHGKAYNALGEKEKRFEIFKENLRFIDEHNSENR----TYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDS--VDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYN-EGCNGGLMDYAFEFIIDN 705
            K+G+ Y    E   R  IF++N ++I+E N +      T+ + +N+F D+T EE+ ++  G          +S   + + P+  E  P +  VDWR KGAV  VKDQG CGSCWAFST  ++EG + + TGSLISL+EQ+LVDC   Y  +GCNGG M+ AF++I  N
Sbjct:   26 KYGRQYVDAEEDSYRRVIFEQNQKYIEEFNKKYENGEVTFNLAMNKFGDMTLEEFNAVMKG------NIPRRSAPVSVFYPKK-ETGPQATEVDWRTKGAVTPVKDQGQCGSCWAFSTTGSLEGQHFLKTGSLISLAEQQLVDCSRPYGPQGCNGGWMNDAFDYIKAN 186          
BLAST of FC929861 vs. ExPASy Swiss-Prot
Match: CATK_CANFA (Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 7.731e-28
Identity = 71/173 (41.04%), Postives = 100/173 (57.80%), Query Frame = 1
Query:  205 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNR--YLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDN 705
            ++ W   + K YN+  ++  R  I+++NL+ I  HN E      TY++ +N   D+T+EE      G +     +     RSN   Y+P      PDSVD+RKKG V  VK+QG CGSCWAFS++ A+EG  K  TG L++LS Q LVDC  S N+GC GG M  AF+++  N
Sbjct:   27 WDLWKKTYRKQYNSKVDELSRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPPSHS-----RSNDTLYIPDWESRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-VSENDGCGGGYMTNAFQYVQKN 193          
BLAST of FC929861 vs. ExPASy Swiss-Prot
Match: CPGP2_ZINOF (Zingipain-2 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.010e-27
Identity = 57/79 (72.15%), Postives = 68/79 (86.08%), Query Frame = 1
Query:  469 LPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDN 705
            LPDS+DWR+ GAV  VK+QG CGSCWAFST+AAVEGIN+IVTG LISLSEQ+LVDC T+ N GC GG M+ AF+FI++N
Sbjct:    3 LPDSIDWRENGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDCTTA-NHGCRGGWMNPAFQFIVNN 80          
BLAST of FC929861 vs. ExPASy Swiss-Prot
Match: CATLL_FASHE (Cathepsin L-like proteinase OS=Fasciola hepatica GN=Cat-1 PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.722e-27
Identity = 67/173 (38.73%), Postives = 103/173 (59.54%), Query Frame = 1
Query:  202 MFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENR----TYKVGLNRFADLTNEEYRSMHLGARFGAKRT---SLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFI 696
            ++  W   + K YN   ++ +R  I+++N++ I EHN  +     TY +GLN+F D+T EE+++ +L     A       +  + +NR       A+PD +DWR+ G V EVKDQG+CGSCWAFST   +EG       + IS SEQ+LVDC   + N GC+GGLM+ A++++
Sbjct:   20 LWHQWKRMYNKEYNGADDQHRR-NIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAKYLTEMSRASDILSHGVPYEANNR-------AVPDKIDWRESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPWGNNGCSGGLMENAYQYL 184          
BLAST of FC929861 vs. ExPASy Swiss-Prot
Match: CYSP_TRYCR (Cruzipain OS=Trypanosoma cruzi PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.938e-27
Identity = 69/178 (38.76%), Postives = 100/178 (56.18%), Query Frame = 1
Query:  166 SSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFII 699
            ++S   ++ + + F  +  KHG+ Y +  E+  R  +F+ENL     H + N     G+  F+DLT EE+RS +     GA   +   +R+   +       P +VDWR +GAV  VKDQG CGSCWAFS I  VE    +    L +LSEQ LV CD + + GC+GGLM+ AFE+I+
Sbjct:   25 TASLHAEETLTSQFAEFKQKHGRVYESAAEEAFRLSVFRENLFLARLHAAANPHATFGVTPFSDLTREEFRSRYHN---GAAHFAAAQERARVPVKVEVVGAPAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKT-DSGCSGGLMNNAFEWIV 198          
BLAST of FC929861 vs. ExPASy Swiss-Prot
Match: CYSP3_HOMAM (Digestive cysteine proteinase 3 OS=Homarus americanus GN=LCP3 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.938e-27
Identity = 66/166 (39.76%), Postives = 97/166 (58.43%), Query Frame = 1
Query:  223 KHGKAYNALGEKEKRFEIFKENLRFIDEHNSENR----TYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDN 705
            ++G+ Y    E+  R  +F++N + I++ N +      T+KV +N+F D+TNEE+ ++  G + G++      +    +    G    D VDWR K  V  VKDQ  CGSCWAFS   A+EG + +    L+SLSEQ+LVDC T Y N+GC GG M  AF++I DN
Sbjct:   26 QYGRKYGDAKEELYRQRVFQQNEQLIEDFNKKFENGEVTFKVAMNQFGDMTNEEFNAVMKGYKKGSR-----GEPKAVFTAEAGPMAAD-VDWRTKALVTPVKDQEQCGSCWAFSATGALEGQHFLKNDELVSLSEQQLVDCSTDYGNDGCGGGWMTSAFDYIKDN 185          
BLAST of FC929861 vs. ExPASy Swiss-Prot
Match: CATL2_PARTE (Cathepsin L 2 OS=Paramecium tetraurelia GN=GSPATT00022898001 PE=3 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 2.938e-27
Identity = 68/173 (39.31%), Postives = 99/173 (57.23%), Query Frame = 1
Query:  202 MFEAWLVKHGKAYNALGEKEKRFEIFKENLRFID--EHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDW--RKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDN 705
            ++  W +K+ + Y +  ++  RF++F +NL +I   + ++E+ TY + LN+FAD++ +E+ S +L  R   K   L +  +N             VDW   KK     VK+QGSCGSCWAFS + A+E    I       LSEQ+LVDC   Y NEGCNGG MD AFE++ DN
Sbjct:   25 LYANWKMKYNRRYTSQRDEMYRFKVFSDNLNYIRAFQDSTESATYTLELNQFADMSQQEFASTYLSLRV-PKTAKLNASNANFQYKGA------EVDWTDNKKVKYPAVKNQGSCGSCWAFSAVGALEINTDIELNKKYELSEQDLVDCSGPYDNEGCNGGWMDSAFEYVADN 190          
The following BLAST results are available for this feature:
BLAST of FC929861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
CATV_GVXN4.532e-2837.21Viral cathepsin OS=Xestia c-nigrum granulosis viru... [more]
CATL2_HUMAN5.919e-2841.90Cathepsin L2 OS=Homo sapiens GN=CTSL2 PE=1 SV=2[more]
CATK_RABIT5.919e-2840.35Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 ... [more]
CYSP2_HOMAM7.731e-2842.26Digestive cysteine proteinase 2 OS=Homarus america... [more]
CATK_CANFA7.731e-2841.04Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1[more]
CPGP2_ZINOF1.010e-2772.15Zingipain-2 OS=Zingiber officinale PE=1 SV=1[more]
CATLL_FASHE1.722e-2738.73Cathepsin L-like proteinase OS=Fasciola hepatica G... [more]
CYSP_TRYCR2.938e-2738.76Cruzipain OS=Trypanosoma cruzi PE=1 SV=1[more]
CYSP3_HOMAM2.938e-2739.76Digestive cysteine proteinase 3 OS=Homarus america... [more]
CATL2_PARTE2.938e-2739.31Cathepsin L 2 OS=Paramecium tetraurelia GN=GSPATT0... [more]

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Properties
Property NameValue
Genbank descriptionC34001C01EF PostHarvC1 Citrus clementina cDNA clone C34001C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929861 ID=FC929861; Name=FC929861; organism=Citrus clementina; type=EST; length=705bp
CATCAATCCATCTTCTTCTCCCAAAAAGAAAAAAAAAAGTTCTTTTCTCA
AAAGATGGGTTTGTTTAGATCACCAACCATGGCCATGTTTTTACTTTTTC
TCTTCACTGTTTCATCTGCCTTGGACATGTCGATTGTATCTTATGATAAA
ACCCATGAGTCAAAATCTAGCAGCTGGAGGACCGACGATGAGGTTATGGC
TATGTTCGAGGCCTGGCTCGTGAAGCATGGCAAGGCTTATAACGCTTTGG
GTGAAAAAGAGAAGAGGTTTGAGATCTTTAAGGAAAATCTTAGGTTTATT
GATGAACATAACTCAGAGAACCGGACCTACAAGGTTGGGTTGAACCGGTT
TGCTGATTTGACCAACGAGGAGTACCGGTCCATGCATCTGGGTGCACGCT
TTGGTGCTAAAAGGACTTCCTTGAAATCAAAGAGGAGCAACCGTTATCTG
CCACGTGTCGGCGAGGCGTTGCCGGACTCTGTTGATTGGAGGAAGAAAGG
AGCTGTCGCTGAAGTTAAAGATCAAGGAAGCTGTGGGAGTTGCTGGGCAT
TTTCAACCATTGCAGCTGTAGAGGGTATAAACAAGATTGTTACAGGTAGC
CTGATCTCACTATCCGAGCAGGAGTTGGTGGATTGTGATACATCATATAA
TGAAGGATGTAATGGTGGTTTGATGGACTATGCATTCGAGTTCATTATTG
ATAAT
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