FC929863

Overview
NameFC929863
Unique NameFC929863
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length706
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig13920 contig Ccv1_Contig13920:76..781. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929863 vs. ExPASy Swiss-Prot
Match: PAPA2_CARPA (Chymopapain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 6.243e-46
Identity = 90/186 (48.39%), Postives = 132/186 (70.97%), Query Frame = 3
Query:  144 DEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKR-TSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYK 698
            + ++ +F++W++KH K Y ++ EK  RFEIF++NL +IDE N +N +Y +GLN FADL+N+E++  ++G  F A+  T L+   +  +  +     P S+DWR KGAV  VK+QG+CGSCWAFSTIA VEGINKIVTG+L+ LSEQELVDCD  ++ GC GG    + +++ +N G+ T + YPY+
Sbjct:   42 ERLIQLFDSWMLKHNKIYESIDEKIYRFEIFRDNLMYIDETNKKNNSYWLGLNGFADLSNDEFKKKYVG--FVAEDFTGLEHFDNEDFTYKHVTNYPQSIDWRAKGAVTPVKNQGACGSCWAFSTIATVEGINKIVTGNLLELSEQELVDCD-KHSYGCKGGYQTTSLQYVANN-GVHTSKVYPYQ 223          
BLAST of FC929863 vs. ExPASy Swiss-Prot
Match: CYSP2_HORVU (Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=EPB2 PE=1 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 5.285e-45
Identity = 103/233 (44.21%), Postives = 133/233 (57.08%), Query Frame = 3
Query:    3 LKRWXLFRSPTMAMFLLFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSE-NRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYK 698
            L +  L  S   A+  +    + SA+ M     DK  ES+ + W        ++E W   H +      EK +RF  FK N  FI  HN   +  Y++ LNRF D+   E+R+  +G       +   S     Y       LP SVDWR+KGAV  VKDQG CGSCWAFST+ +VEGIN I TGSL+SLSEQEL+DCDT+ N+GC GGLMD AFE+I +NGG+ TE  YPY+
Sbjct:    4 LSKKLLVASMVAAVLAVAAVELCSAIPME----DKDLESEEALWD-------LYERWQSAH-RVRRHHAEKHRRFGTFKSNAHFIHSHNKRGDHPYRLHLNRFGDMDQAEFRATFVGDLRRDTPSKPPSVPGFMYAALNVSDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTADNDGCQGGLMDNAFEYIKNNGGLITEAAYPYR 224          
BLAST of FC929863 vs. ExPASy Swiss-Prot
Match: CYSP1_HORVU (Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=EPB1 PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 6.903e-45
Identity = 103/233 (44.21%), Postives = 132/233 (56.65%), Query Frame = 3
Query:    3 LKRWXLFRSPTMAMFLLFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSE-NRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYK 698
            L +  L  S   A+  +    + SA+ M     DK  ES+ + W        ++E W   H +      EK +RF  FK N  FI  HN   +  Y++ LNRF D+   E+R+  +G           S     Y       LP SVDWR+KGAV  VKDQG CGSCWAFST+ +VEGIN I TGSL+SLSEQEL+DCDT+ N+GC GGLMD AFE+I +NGG+ TE  YPY+
Sbjct:    4 LSKKLLVASMVAAVLAVAAVELCSAIPME----DKDLESEEALWD-------LYERWQSAH-RVRRHHAEKHRRFGTFKSNAHFIHSHNKRGDHPYRLHLNRFGDMDQAEFRATFVGDLRRDTPAKPPSVPGFMYAALNVSDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTADNDGCQGGLMDNAFEYIKNNGGLITEAAYPYR 224          
BLAST of FC929863 vs. ExPASy Swiss-Prot
Match: PAPA1_CARPA (Papain OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 7.143e-42
Identity = 93/217 (42.86%), Postives = 136/217 (62.67%), Query Frame = 3
Query:   51 LFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEA-LPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYK 698
            LF++   S  D SIV Y +   + +      + ++ +FE+W++KH K Y  + EK  RFEIFK+NL++IDE N +N +Y +GLN FAD++N+E++  + G+  G   T+   + S   +   G+  +P+ VDWR+KGAV  VK+QGSCGSCWAFS +  +EGI KI TG+L   SEQEL+DCD   + GCNGG    A + ++   GI     YPY+
Sbjct:   17 LFVYMGLSFGDFSIVGYSQNDLTST------ERLIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKKNNSYWLGLNVFADMSNDEFKEKYTGSIAGNYTTT---ELSYEEVLNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNEYSEQELLDCDRR-SYGCNGGYPWSALQ-LVAQYGIHYRNTYPYE 222          
BLAST of FC929863 vs. ExPASy Swiss-Prot
Match: PAPA4_CARPA (Papaya proteinase 4 OS=Carica papaya PE=1 SV=3)

HSP 1 Score: 169.859 bits (429), Expect = 1.218e-41
Identity = 90/208 (43.27%), Postives = 124/208 (59.62%), Query Frame = 3
Query:   72 SALDMSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPY 695
            S  D SIV Y +   + +      + ++ +F +W++KH K Y  + EK  RFEIFK+NL++IDE N     Y +GLN F+DL+N+E++  ++G+                ++      LP+SVDWR KGAV  VK QG C SCWAFST+A VEGINKI TG+L+ LSEQELVDCD   + GCN G    + +++  N GI     YPY
Sbjct:   24 SYCDFSIVGYSQDDLTST------ERLIQLFNSWMLKHNKNYKNVDEKLYRFEIFKDNLKYIDERNKMINGYWLGLNEFSDLSNDEFKEKYVGS---LPEDYTNQPYDEEFVNEDIVDLPESVDWRAKGAVTPVKHQGYCESCWAFSTVATVEGINKIKTGNLVELSEQELVDCD-KQSYGCNRGYQSTSLQYVAQN-GIHLRAKYPY 220          
BLAST of FC929863 vs. ExPASy Swiss-Prot
Match: CYSP5_DICDI (Cysteine proteinase 5 OS=Dictyostelium discoideum GN=cprE PE=2 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 1.591e-41
Identity = 86/179 (48.04%), Postives = 114/179 (63.69%), Query Frame = 3
Query:  162 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYK 698
            F  W++ H K+Y +  E   R+ IFK N+ ++ + NS+     +GLN FAD+TNEEYR+ +LG +F A  +SL   +  +       A   S DWR +GAV  VK+QG CG CW+FST  + EG +    G L+SLSEQ L+DC T  N GC+GGLM YAFE+II+N GIDTE  YPYK
Sbjct:   30 FTDWMITHQKSYTS-EEFGARYNIFKANMDYVQQWNSKGSETVLGLNNFADITNEEYRNTYLGTKFDA--SSLIGTQEEKVFTTSSAA---SKDWRSEGAVTPVKNQGQCGGCWSFSTTGSTEGAHFQSKGELVSLSEQNLIDCSTE-NSGCDGGLMTYAFEYIINNNGIDTESSYPYK 201          
BLAST of FC929863 vs. ExPASy Swiss-Prot
Match: BROM1_ANACO (Fruit bromelain OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.714e-41
Identity = 93/219 (42.47%), Postives = 131/219 (59.82%), Query Frame = 3
Query:   48 LLFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENR-TYKVGLNRFADLTNEEYRSMHLGARF--GAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPY 695
            L+FLF    A+  S         S +S    +D +M  FE W+ ++G+ Y    EK +RF+IFK N++ I+  NS N  +Y +G+N+F D+T  E+ + + G       +R  + S            A+P S+DWR  GAV EVK+Q  CGSCW+F+ IA VEGI KI TG L+SLSEQE++DC  SY  GC GG ++ A++FII N G+ TEE+YPY
Sbjct:    7 LVFLFLFLCAMWAS--------PSAASRDEPNDPMMKRFEEWMAEYGRVYKDDDEKMRRFQIFKNNVKHIETFNSRNENSYTLGINQFTDMTKSEFVAQYTGVSLPLNIEREPVVSFDDVNI-----SAVPQSIDWRDYGAVNEVKNQNPCGSCWSFAAIATVEGIYKIKTGYLVSLSEQEVLDCAVSY--GCKGGWVNKAYDFIISNNGVTTEENYPY 210          
BLAST of FC929863 vs. ExPASy Swiss-Prot
Match: CATS_MOUSE (Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.545e-41
Identity = 89/186 (47.85%), Postives = 115/186 (61.83%), Query Frame = 3
Query:  162 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY---NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYK 698
            ++ W   H K Y    E+E R  I+++NL+FI  HN E      TY+VG+N   D+TNEE     +  R GA R S +S ++  +       LPD+VDWR+KG V EVK QGSCG+CWAFS + A+EG  K+ TG LISLS Q LVDC       N+GC GG M  AF++IIDNGGI+ +  YPYK
Sbjct:   36 WDLWKKTHEKEYKDKNEEEVRRLIWEKNLKFIMIHNLEYSMGMHTYQVGMNDMGDMTNEE-----ISCRMGALRISRQSPKTVTFRSYSNRTLPDTVDWREKGCVTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEEKYGNKGCGGGYMTEAFQYIIDNGGIEADASYPYK 216          
BLAST of FC929863 vs. ExPASy Swiss-Prot
Match: CYSP2_MAIZE (Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.630e-41
Identity = 84/180 (46.67%), Postives = 114/180 (63.33%), Query Frame = 3
Query:  162 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNE-GCNGGLMDYAFEFIIDNGGIDTEEDYPYK 698
            F  + V++GK+Y +  E  KRF IF E+L+ +   N +  +Y++G+NRFAD++ EE+R+  LGA      T       N  +     ALP++ DWR+ G V+ VK+QG CGSCW FST  A+E      TG  ISLSEQ+LVDC  ++N  GCNGGL   AFE+I  NGG+DTEE YPY+
Sbjct:   59 FARFAVRYGKSYESAAEVHKRFRIFSESLQLVRSTNRKGLSYRLGINRFADMSWEEFRATRLGAAQNCSATLT----GNHRMRAAAVALPETKDWREDGIVSPVKNQGHCGSCWTFSTTGALEAAYTQATGKPISLSEQQLVDCGFAFNNFGCNGGLPSQAFEYIKYNGGLDTEESYPYQ 234          
BLAST of FC929863 vs. ExPASy Swiss-Prot
Match: ORYC_ORYSJ (Oryzain gamma chain OS=Oryza sativa subsp. japonica GN=Os09g0442300 PE=2 SV=2)

HSP 1 Score: 166.392 bits (420), Expect = 1.347e-40
Identity = 84/179 (46.93%), Postives = 111/179 (62.01%), Query Frame = 3
Query:  162 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNE-GCNGGLMDYAFEFIIDNGGIDTEEDYPY 695
            F  + V+HGK Y    E ++RF IF E+L  +   N     Y++G+NRFAD++ EE+++  LGA      T   + R      R   ALP++ DWR+ G V+ VKDQG CGSCW FST  ++E      TG  +SLSEQ+LVDC T+YN  GC+GGL   AFE+I  NGG+DTEE YPY
Sbjct:   62 FARFAVRHGKRYGDAAEVQRRFRIFSESLELVRSTNRRGLPYRLGINRFADMSWEEFQASRLGAAQNCSATLAGNHRM-----RDAAALPETKDWREDGIVSPVKDQGHCGSCWTFSTTGSLEAAYTQATGKPVSLSEQQLVDCATAYNNFGCSGGLPSQAFEYIKYNGGLDTEEAYPY 235          
The following BLAST results are available for this feature:
BLAST of FC929863 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
PAPA2_CARPA6.243e-4648.39Chymopapain OS=Carica papaya PE=1 SV=2[more]
CYSP2_HORVU5.285e-4544.21Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=E... [more]
CYSP1_HORVU6.903e-4544.21Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=E... [more]
PAPA1_CARPA7.143e-4242.86Papain OS=Carica papaya PE=1 SV=1[more]
PAPA4_CARPA1.218e-4143.27Papaya proteinase 4 OS=Carica papaya PE=1 SV=3[more]
CYSP5_DICDI1.591e-4148.04Cysteine proteinase 5 OS=Dictyostelium discoideum ... [more]
BROM1_ANACO2.714e-4142.47Fruit bromelain OS=Ananas comosus PE=1 SV=1[more]
CATS_MOUSE3.545e-4147.85Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1[more]
CYSP2_MAIZE4.630e-4146.67Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=... [more]
ORYC_ORYSJ1.347e-4046.93Oryzain gamma chain OS=Oryza sativa subsp. japonic... [more]

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Properties
Property NameValue
Genbank descriptionC34001C04EF PostHarvC1 Citrus clementina cDNA clone C34001C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929863 ID=FC929863; Name=FC929863; organism=Citrus clementina; type=EST; length=706bp
TTCTCAAAAGATGGGNTTTGTTTAGATCACCAACCATGGCCATGTTTTTA
CTTTTTCTCTTCACTGTTTCATCTGCCTTGGACATGTCGATTGTATCTTA
TGATAAAACCCATGAGTCAAAATCTAGCAGCTGGAGGACCGACGATGAGG
TTATGGCTATGTTCGAGGCCTGGCTCGTGAAGCATGGCAAGGCTTATAAC
GCTTTGGGTGAAAAAGAGAAGAGGTTTGAGATCTTTAAGGAAAATCTTAG
GTTTATTGATGAACATAACTCAGAGAACCGGACCTACAAGGTTGGGTTGA
ACCGGTTTGCTGATTTGACCAACGAGGAGTACCGGTCCATGCATCTGGGT
GCACGCTTTGGTGCTAAAAGGACTTCCTTGAAATCAAAGAGGAGCAACCG
TTATCTGCCACGTGTCGGCGAGGCGTTGCCGGACTCTGTTGATTGGAGGA
AGAAAGGAGCTGTCGCTGAAGTTAAAGATCAAGGAAGCTGTGGGAGTTGC
TGGGCATTTTCAACCATTGCAGCTGTAGAGGGTATAAACAAGATTGTTAC
AGGTAGCCTGATCTCACTATCCGAGCAGGAGTTGGTGGATTGTGATACAT
CATATAATGAAGGATGTAATGGTGGTTTGATGGACTATGCATTCGAGTTC
ATTATTGATAATGGAGGTATTGACACAGAAGAAGATTACCCCTACAAGCC
ATTGAT
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