FC929863

Overview
NameFC929863
Unique NameFC929863
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length706
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig13920 contig Ccv1_Contig13920:76..781. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929863 vs. ExPASy Swiss-Prot
Match: CATS_HUMAN (Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3)

HSP 1 Score: 160.229 bits (404), Expect = 9.654e-39
Identity = 83/184 (45.11%), Postives = 113/184 (61.41%), Query Frame = 3
Query:  171 WLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY--NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKPL 704
            W   +GK Y    E+  R  I+++NL+F+  HN E+     +Y +G+N   D+T+EE  S+       + R   + +R+  Y       LPDSVDWR+KG V EVK QGSCG+CWAFS + A+E   K+ TG L+SLS Q LVDC T    N+GCNGG M  AF++IIDN GID++  YPYK +
Sbjct:   31 WKKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSL-----MSSLRVPSQWQRNITYKSNPNRILPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAM 209          
BLAST of FC929863 vs. ExPASy Swiss-Prot
Match: ALEU_ARATH (Thiol protease aleurain OS=Arabidopsis thaliana GN=ALEU PE=1 SV=2)

HSP 1 Score: 159.458 bits (402), Expect = 1.647e-38
Identity = 86/179 (48.04%), Postives = 113/179 (63.13%), Query Frame = 3
Query:  162 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNE-GCNGGLMDYAFEFIIDNGGIDTEEDYPY 695
            F  +  ++GK Y  + E + RF IFKENL  I   N +  +YK+G+N+FADLT +E++   LGA   A+  S   K S++       ALP++ DWR+ G V+ VKDQG CGSCW FST  A+E       G  ISLSEQ+LVDC  ++N  GCNGGL   AFE+I  NGG+DTE+ YPY
Sbjct:   59 FARFTHRYGKKYQNVEEMKLRFSIFKENLDLIRSTNKKGLSYKLGVNQFADLTWQEFQRTKLGA---AQNCSATLKGSHKVTEA---ALPETKDWREDGIVSPVKDQGGCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDCAGAFNNYGCNGGLPSQAFEYIKSNGGLDTEKAYPY 231          
BLAST of FC929863 vs. ExPASy Swiss-Prot
Match: A494_ARATH (Probable cysteine proteinase A494 OS=Arabidopsis thaliana GN=At2g21430 PE=2 SV=2)

HSP 1 Score: 159.458 bits (402), Expect = 1.647e-38
Identity = 91/225 (40.44%), Postives = 128/225 (56.89%), Query Frame = 3
Query:   48 LLFLF-TVSSALDMSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD--------TSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPY 695
            L+F+F +VS   D  ++      E++     ++D     F  +  K GK Y ++ E   RF +FK NL     H   + + + G+ +F+DLT  E+R  HLG + G K    K       LP   + LP+  DWR +GAV  VK+QGSCGSCW+FST  A+EG + + TG L+SLSEQ+LVDCD         S + GCNGGLM+ AFE+ +  GG+  E+DYPY
Sbjct:   13 LIFVFVSVSVCGDEDVLIRQVVDETEPKVLSSEDH----FTLFKKKFGKVYGSIEEHYYRFSVFKANLLRAMRHQKMDPSARHGVTQFSDLTRSEFRRKHLGVKGGFKLP--KDANQAPILPT--QNLPEEFDWRDRGAVTPVKNQGSCGSCWSFSTTGALEGAHFLATGKLVSLSEQQLVDCDHECDPEEEGSCDSGCNGGLMNSAFEYTLKTGGLMREKDYPY 229          
BLAST of FC929863 vs. ExPASy Swiss-Prot
Match: CATS_BOVIN (Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 2.151e-38
Identity = 82/187 (43.85%), Postives = 116/187 (62.03%), Query Frame = 3
Query:  162 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY--NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKPL 704
            ++ W   +GK Y    E+  R  I+++NL+ +  HN E+     +Y++G+N   D+T+EE  S+       + R   +  R+  Y     + LPDS+DWR+KG V EVK QG+CGSCWAFS + A+E   K+ TG L+SLS Q LVDC T+   N+GCNGG M  AF++IIDN GID+E  YPYK +
Sbjct:   28 WDLWKKTYGKQYKEKNEEVARRLIWEKNLKTVTLHNLEHSMGMHSYELGMNHLGDMTSEEVISL-----MSSLRVPSQWPRNVTYKSDPNQKLPDSMDWREKGCVTEVKYQGACGSCWAFSAVGALEAQVKLKTGKLVSLSAQNLVDCSTAKYGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAM 209          
BLAST of FC929863 vs. ExPASy Swiss-Prot
Match: CATL_SARPE (Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.151e-38
Identity = 88/195 (45.13%), Postives = 116/195 (59.49%), Query Frame = 3
Query:  144 DEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNS----ENRTYKVGLNRFADLTNEEYRSM-----HLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYK 698
            D +   +  + ++H K Y    E+  R +IF EN   I +HN        +YK+GLN++AD+ + E++       H   +   +RT L       Y+P     +P SVDWR+ GAV  VKDQG CGSCWAFS+  A+EG +    G L+SLSEQ LVDC T Y N GCNGGLMD AF +I DNGGIDTE+ YPY+
Sbjct:   22 DLIKEEWHTYKLQHRKNYANEVEERFRMKIFNENRHKIAKHNQLFAQGKVSYKLGLNKYADMLHHEFKETMNGYNHTLRQLMRERTGLVGAT---YIPPAHVTVPKSVDWREHGAVTGVKDQGHCGSCWAFSSTGALEGQHFRKAGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYE 213          
BLAST of FC929863 vs. ExPASy Swiss-Prot
Match: ANAN_ANACO (Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2)

HSP 1 Score: 158.303 bits (399), Expect = 3.669e-38
Identity = 81/195 (41.54%), Postives = 119/195 (61.03%), Query Frame = 3
Query:  117 SKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSEN-RTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYK 698
            S +S     D +M  FE W+ ++G+ Y    EK  RF+IFK N+  I+  N+ N  +Y +G+N+F D+TN E+ + + G        ++K +    +      ++P S+DWR  GAV  VK+QG CGSCWAF++IA VE I KI  G+L+SLSEQ+++DC  SY  GC GG ++ A+ FII N G+ +   YPYK
Sbjct:   22 SAASCDEPSDPMMKQFEEWMAEYGRVYKDNDEKMLRFQIFKNNVNHIETFNNRNGNSYTLGINQFTDMTNNEFVAQYTGLSLPL---NIKREPVVSFDDVDISSVPQSIDWRDSGAVTSVKNQGRCGSCWAFASIATVESIYKIKRGNLVSLSEQQVLDCAVSY--GCKGGWINKAYSFIISNKGVASAAIYPYK 211          
BLAST of FC929863 vs. ExPASy Swiss-Prot
Match: CATL1_PIG (Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 6.258e-38
Identity = 83/196 (42.35%), Postives = 119/196 (60.71%), Query Frame = 3
Query:  123 SSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSE----NRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPY 695
            S++ + D  + A +  W   HG+ Y  + E+  R  ++++N++ I+ HN E       + + +N F D+TNEE+R +  G +      + K K+   +   +   +P SVDWR+KG V  VK+QG CGSCWAFS   A+EG     TG L+SLSEQ LVDC     N+GCNGGLMD AF+++ DNGG+DTEE YPY
Sbjct:   16 SAAPKLDQNLDADWYKWKATHGRLYG-MNEEGWRRAVWEKNMKMIELHNQEYSQGKHGFSMAMNAFGDMTNEEFRQVMNGFQ------NQKHKKGKVFHESLVLEVPKSVDWREKGYVTAVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGLMDNAFQYVKDNGGLDTEESYPY 204          
BLAST of FC929863 vs. ExPASy Swiss-Prot
Match: CATL1_MOUSE (Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 6.258e-38
Identity = 84/191 (43.98%), Postives = 114/191 (59.69%), Query Frame = 3
Query:  141 DDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSE----NRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYK 698
            D    A +  W   H + Y    E+E R  I+++N+R I  HN E       + + +N F D+TNEE+R +  G R        K K+   +   +   +P SVDWR+KG V  VK+QG CGSCWAFS    +EG   + TG LISLSEQ LVDC  +  N+GCNGGLMD+AF++I +NGG+D+EE YPY+
Sbjct:   22 DQTFSAEWHQWKSTHRRLYGT-NEEEWRRAIWEKNMRMIQLHNGEYSNGQHGFSMEMNAFGDMTNEEFRQVVNGYRHQ------KHKKGRLFQEPLMLKIPKSVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHAQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYE 205          
BLAST of FC929863 vs. ExPASy Swiss-Prot
Match: CYSP1_HOMAM (Digestive cysteine proteinase 1 OS=Homarus americanus GN=LCP1 PE=1 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 8.173e-38
Identity = 80/187 (42.78%), Postives = 119/187 (63.64%), Query Frame = 3
Query:  162 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENR----TYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDS--VDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDC--DTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYK 698
            +E +  K G+ Y  L E+  R  +F +NL++I+E N +      TY + +N+F+D+TNE++ ++  G + G +  ++ +           +A P+S  VDWR KGAV  VKDQG CGSCWAFST   +EG + + TG L+SLSEQ+LVDC   + YN+GCNGG ++ A  ++ DNGG+DTE  YPY+
Sbjct:   20 WEEFKGKFGRKYVDLEEERYRLNVFLDNLQYIEEFNKKYERGEVTYNLAINQFSDMTNEKFNAVMKGYKKGPRPAAVFTST---------DAAPESTEVDWRTKGAVTPVKDQGQCGSCWAFSTTGGIEGQHFLKTGRLVSLSEQQLVDCAGGSYYNQGCNGGWVERAIMYVRDNGGVDTESSYPYE 197          
BLAST of FC929863 vs. ExPASy Swiss-Prot
Match: CATL1_HUMAN (Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 8.173e-38
Identity = 83/197 (42.13%), Postives = 120/197 (60.91%), Query Frame = 3
Query:  123 SSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENR----TYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD-TSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYK 698
            S++   D  + A +  W   H + Y  + E+  R  ++++N++ I+ HN E R    ++ + +N F D+T+EE+R +  G +      + K ++   +   +    P SVDWR+KG V  VK+QG CGSCWAFS   A+EG     TG LISLSEQ LVDC     NEGCNGGLMDYAF+++ DNGG+D+EE YPY+
Sbjct:   16 SATLTFDHSLEAQWTKWKAMHNRLYG-MNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQ------NRKPRKGKVFQEPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYE 205          
The following BLAST results are available for this feature:
BLAST of FC929863 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
CATS_HUMAN9.654e-3945.11Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3[more]
ALEU_ARATH1.647e-3848.04Thiol protease aleurain OS=Arabidopsis thaliana GN... [more]
A494_ARATH1.647e-3840.44Probable cysteine proteinase A494 OS=Arabidopsis t... [more]
CATS_BOVIN2.151e-3843.85Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2[more]
CATL_SARPE2.151e-3845.13Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1[more]
ANAN_ANACO3.669e-3841.54Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2[more]
CATL1_PIG6.258e-3842.35Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1[more]
CATL1_MOUSE6.258e-3843.98Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2[more]
CYSP1_HOMAM8.173e-3842.78Digestive cysteine proteinase 1 OS=Homarus america... [more]
CATL1_HUMAN8.173e-3842.13Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionC34001C04EF PostHarvC1 Citrus clementina cDNA clone C34001C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929863 ID=FC929863; Name=FC929863; organism=Citrus clementina; type=EST; length=706bp
TTCTCAAAAGATGGGNTTTGTTTAGATCACCAACCATGGCCATGTTTTTA
CTTTTTCTCTTCACTGTTTCATCTGCCTTGGACATGTCGATTGTATCTTA
TGATAAAACCCATGAGTCAAAATCTAGCAGCTGGAGGACCGACGATGAGG
TTATGGCTATGTTCGAGGCCTGGCTCGTGAAGCATGGCAAGGCTTATAAC
GCTTTGGGTGAAAAAGAGAAGAGGTTTGAGATCTTTAAGGAAAATCTTAG
GTTTATTGATGAACATAACTCAGAGAACCGGACCTACAAGGTTGGGTTGA
ACCGGTTTGCTGATTTGACCAACGAGGAGTACCGGTCCATGCATCTGGGT
GCACGCTTTGGTGCTAAAAGGACTTCCTTGAAATCAAAGAGGAGCAACCG
TTATCTGCCACGTGTCGGCGAGGCGTTGCCGGACTCTGTTGATTGGAGGA
AGAAAGGAGCTGTCGCTGAAGTTAAAGATCAAGGAAGCTGTGGGAGTTGC
TGGGCATTTTCAACCATTGCAGCTGTAGAGGGTATAAACAAGATTGTTAC
AGGTAGCCTGATCTCACTATCCGAGCAGGAGTTGGTGGATTGTGATACAT
CATATAATGAAGGATGTAATGGTGGTTTGATGGACTATGCATTCGAGTTC
ATTATTGATAATGGAGGTATTGACACAGAAGAAGATTACCCCTACAAGCC
ATTGAT
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