FC929881

Overview
NameFC929881
Unique NameFC929881
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC929881 vs. ExPASy Swiss-Prot
Match: ALLB_ECOL6 (Allantoinase OS=Escherichia coli O6 GN=allB PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.822e-17
Identity = 45/139 (32.37%), Postives = 75/139 (53.96%), Query Frame = 1 
Query:  193 VEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSG 609
            + +K+G I +I  +    ++     V+D    V+ PG++D H H+ +PGR+ WEG+ +            +I+MPLN  P+T+   +++LK DAA+ ++ +D    GGLV   +YN   L  L   GV+G K F+   G
Sbjct:   23 IAVKDGKIAAIGQDLGDAKD-----VMDASGLVVSPGMVDAHTHISEPGRSHWEGYETGTRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQLGGLV---SYNIDRLHELDEVGVVGFKCFVATCG 153
[Close]
BLAST of FC929881 vs. ExPASy Swiss-Prot
Match: ALLB_ECOL5 (Allantoinase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=allB PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.822e-17
Identity = 45/139 (32.37%), Postives = 75/139 (53.96%), Query Frame = 1 
Query:  193 VEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSG 609
            + +K+G I +I  +    ++     V+D    V+ PG++D H H+ +PGR+ WEG+ +            +I+MPLN  P+T+   +++LK DAA+ ++ +D    GGLV   +YN   L  L   GV+G K F+   G
Sbjct:   23 IAVKDGKIAAIGQDLGDAKD-----VMDASGLVVSPGMVDAHTHISEPGRSHWEGYETGTRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQLGGLV---SYNIDRLHELDEVGVVGFKCFVATCG 153
[Close]
BLAST of FC929881 vs. ExPASy Swiss-Prot
Match: ALLB_ECOK1 (Allantoinase OS=Escherichia coli O1:K1 / APEC GN=allB PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.822e-17
Identity = 45/139 (32.37%), Postives = 75/139 (53.96%), Query Frame = 1 
Query:  193 VEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSG 609
            + +K+G I +I  +    ++     V+D    V+ PG++D H H+ +PGR+ WEG+ +            +I+MPLN  P+T+   +++LK DAA+ ++ +D    GGLV   +YN   L  L   GV+G K F+   G
Sbjct:   23 IAVKDGKIAAIGQDLGDAKD-----VMDASGLVVSPGMVDAHTHISEPGRSHWEGYETGTRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQLGGLV---SYNIDRLHELDEVGVVGFKCFVATCG 153
[Close]
BLAST of FC929881 vs. ExPASy Swiss-Prot
Match: ALLB_ECO81 (Allantoinase OS=Escherichia coli O81 (strain ED1a) GN=allB PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.822e-17
Identity = 45/139 (32.37%), Postives = 75/139 (53.96%), Query Frame = 1 
Query:  193 VEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSG 609
            + +K+G I +I  +    ++     V+D    V+ PG++D H H+ +PGR+ WEG+ +            +I+MPLN  P+T+   +++LK DAA+ ++ +D    GGLV   +YN   L  L   GV+G K F+   G
Sbjct:   23 IAVKDGKIAAIGQDLGDAKD-----VMDASGLVVSPGMVDAHTHISEPGRSHWEGYETGTRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQLGGLV---SYNIDRLHELDEVGVVGFKCFVATCG 153
[Close]
BLAST of FC929881 vs. ExPASy Swiss-Prot
Match: ALLB_ECO45 (Allantoinase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=allB PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.822e-17
Identity = 45/139 (32.37%), Postives = 75/139 (53.96%), Query Frame = 1 
Query:  193 VEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSG 609
            + +K+G I +I  +    ++     V+D    V+ PG++D H H+ +PGR+ WEG+ +            +I+MPLN  P+T+   +++LK DAA+ ++ +D    GGLV   +YN   L  L   GV+G K F+   G
Sbjct:   23 IAVKDGKIAAIGQDLGDAKD-----VMDASGLVVSPGMVDAHTHISEPGRSHWEGYETGTRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQLGGLV---SYNIDRLHELDEVGVVGFKCFVATCG 153
[Close]
BLAST of FC929881 vs. ExPASy Swiss-Prot
Match: ALLB_ECO27 (Allantoinase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=allB PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.822e-17
Identity = 45/139 (32.37%), Postives = 75/139 (53.96%), Query Frame = 1 
Query:  193 VEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSG 609
            + +K+G I +I  +    ++     V+D    V+ PG++D H H+ +PGR+ WEG+ +            +I+MPLN  P+T+   +++LK DAA+ ++ +D    GGLV   +YN   L  L   GV+G K F+   G
Sbjct:   23 IAVKDGKIAAIGQDLGDAKD-----VMDASGLVVSPGMVDAHTHISEPGRSHWEGYETGTRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQLGGLV---SYNIDRLHELDEVGVVGFKCFVATCG 153
[Close]
BLAST of FC929881 vs. ExPASy Swiss-Prot
Match: ALLB_ECOSM (Allantoinase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=allB PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.022e-16
Identity = 41/115 (35.65%), Postives = 65/115 (56.52%), Query Frame = 1 
Query:  265 QVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSG 609
            +V+D    V+ PG++D H H+ +PGR+ WEG+ +            +I+MPLN  P+T+   +++LK DAA+ ++ +D    GGLV   +YN   L  L   GV+G K F+   G
Sbjct:   42 EVMDASGLVVSPGMVDAHTHISEPGRSHWEGYETGTRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQLGGLV---SYNIDRLHELDEVGVVGFKCFVATCG 153
[Close]
BLAST of FC929881 vs. ExPASy Swiss-Prot
Match: ALLB_ECOSE (Allantoinase OS=Escherichia coli (strain SE11) GN=allB PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.022e-16
Identity = 41/115 (35.65%), Postives = 65/115 (56.52%), Query Frame = 1 
Query:  265 QVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSG 609
            +V+D    V+ PG++D H H+ +PGR+ WEG+ +            +I+MPLN  P+T+   +++LK DAA+ ++ +D    GGLV   +YN   L  L   GV+G K F+   G
Sbjct:   42 EVMDASGLVVSPGMVDAHTHISEPGRSHWEGYETGTRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQLGGLV---SYNIDRLHELDEVGVVGFKCFVATCG 153
[Close]
BLAST of FC929881 vs. ExPASy Swiss-Prot
Match: ALLB_ECOLU (Allantoinase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=allB PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.022e-16
Identity = 41/115 (35.65%), Postives = 65/115 (56.52%), Query Frame = 1 
Query:  265 QVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSG 609
            +V+D    V+ PG++D H H+ +PGR+ WEG+ +            +I+MPLN  P+T+   +++LK DAA+ ++ +D    GGLV   +YN   L  L   GV+G K F+   G
Sbjct:   42 EVMDASGLVVSPGMVDAHTHISEPGRSHWEGYETGTRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQLGGLV---SYNIDRLHELDEVGVVGFKCFVATCG 153
[Close]
BLAST of FC929881 vs. ExPASy Swiss-Prot
Match: ALLB_ECOLI (Allantoinase OS=Escherichia coli (strain K12) GN=allB PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.022e-16
Identity = 41/115 (35.65%), Postives = 65/115 (56.52%), Query Frame = 1 
Query:  265 QVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSG 609
            +V+D    V+ PG++D H H+ +PGR+ WEG+ +            +I+MPLN  P+T+   +++LK DAA+ ++ +D    GGLV   +YN   L  L   GV+G K F+   G
Sbjct:   42 EVMDASGLVVSPGMVDAHTHISEPGRSHWEGYETGTRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQLGGLV---SYNIDRLHELDEVGVVGFKCFVATCG 153
The following BLAST results are available for this feature:
BLAST of FC929881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
ALLB_ECOL67.822e-1732.37Allantoinase OS=Escherichia coli O6 GN=allB PE=3 S... [more]
ALLB_ECOL57.822e-1732.37Allantoinase OS=Escherichia coli O6:K15:H31 (strai... [more]
ALLB_ECOK17.822e-1732.37Allantoinase OS=Escherichia coli O1:K1 / APEC GN=a... [more]
ALLB_ECO817.822e-1732.37Allantoinase OS=Escherichia coli O81 (strain ED1a)... [more]
ALLB_ECO457.822e-1732.37Allantoinase OS=Escherichia coli O45:K1 (strain S8... [more]
ALLB_ECO277.822e-1732.37Allantoinase OS=Escherichia coli O127:H6 (strain E... [more]
ALLB_ECOSM1.022e-1635.65Allantoinase OS=Escherichia coli (strain SMS-3-5 /... [more]
ALLB_ECOSE1.022e-1635.65Allantoinase OS=Escherichia coli (strain SE11) GN=... [more]
ALLB_ECOLU1.022e-1635.65Allantoinase OS=Escherichia coli O17:K52:H18 (stra... [more]
ALLB_ECOLI1.022e-1635.65Allantoinase OS=Escherichia coli (strain K12) GN=a... [more]

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Properties
Property NameValue
Genbank descriptionC34001D12EF PostHarvC1 Citrus clementina cDNA clone C34001D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929881 ID=FC929881; Name=FC929881; organism=Citrus clementina; type=EST; length=698bp
AGAGGAATGGAGAATCTCAATCTGCAGTGGAGGCTGTTGCCTACGCTAAC
ACTGCTAGCTGCTTCTCTGTTCTTGCTTGTTTTTAAGGATTCTGCCAAGT
TATCTCACAGTGAGTGCAGTCTCCTTCCTTACAACCAGTACTGGTTAACC
AGCAAGCGGATTGTGACACCAAAAGGAGTTATTTCTGGTGCAGTTGAGAT
CAAGGAAGGGAATATCATATCCATTGTTTCAGAAGAAGATTGGCCTCGGA
ACTCCAAGACAGGACAAGTAGTTGATTATGGAGAGGCTGTTATCATGCCT
GGTTTGATTGATGTGCATGCACATCTCGATGATCCAGGAAGAACTGAGTG
GGAAGGATTTCCTTCGGGGACCAAAGCAGCTGCTGCAGGTGGTATAACAA
CATTAATTGACATGCCCCTCAATAGCGATCCCTCAACTATCTCAACGGAA
ACTCTGAAATTAAAGGTTGATGCAGCAGAGAAGAGAATCTATGTTGATGT
TGGTTTTTGGGGAGGTCTAGTTCCTGAAAATGCATATAATGCAAGTGCTC
TAGAAGCTCTTTTGAATGCTGGTGTTCTTGGATTAAAGTCTTTTATGTGT
CCTTCAGGGATCAACGACTTTCCTATNGACAATGCCAGCCATATTAAGGA
AGGACTATCTGTATTGGCAAGATACAAAGAACTTTACTTGTACATGCT
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