FC929885
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929885 vs. ExPASy Swiss-Prot
Match: RPN8_ASHGO (26S proteasome regulatory subunit RPN8 OS=Ashbya gossypii GN=RPN8 PE=3 SV=1) HSP 1 Score: 250.366 bits (638), Expect = 7.531e-66 Identity = 126/235 (53.62%), Postives = 171/235 (72.77%), Query Frame = 2 Query: 2 EKVIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVP-NPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNL 703 E+V V PLVLLS++D+Y R+ KR VGVLLG + T+ V+NS+A+PFEED+K+P +WFLDHNY E+M M K+INAKE ++GWY +GPKLR +DL I+ LF Y N +L+I+DV+ + +G+PT AY +EEVK++ + +++ FVH+P+ I A E EEIGVEHLLRDV+D L+ +T +L +L+GL +LR+I YLD V +LP NH IL LQDVFNLLPNL Sbjct: 6 EQVNVAPLVLLSVLDHYKRMNTPDNKRCVGVLLGDNSGSTIKVTNSFALPFEEDEKNPDVWFLDHNYIENMNDMCKKINAKEKMIGWYHSGPKLRSSDLKINGLFKKYTQGNSLLLIVDVKQQGVGLPTDAYMAIEEVKDDGS-STERTFVHLPTAIEAEEAEEIGVEHLLRDVRDQAAGNLSLRLTNQLKSLQGLQRKLRDIVAYLDKVNSGQLPANHIILGKLQDVFNLLPNL 239
BLAST of FC929885 vs. ExPASy Swiss-Prot
Match: EIF3F_ARATH (Eukaryotic translation initiation factor 3 subunit F OS=Arabidopsis thaliana GN=TIF3F1 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.756e-22 Identity = 69/234 (29.49%), Postives = 118/234 (50.43%), Query Frame = 2 Query: 14 VHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFK-GTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVH---VPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNL 703 +HPLV+ ++ D + R D+ +RV+G LLGS GTVD+ NSYAVP E + D +YH +M + ++N+KE +VGWYSTG + IH + VPNP+ + +D KA+ V N + +++ H +P ++ + E +G + L K T++ L N++ G ++ L + ++ Y+D V+ ++ ++ I + D LP L Sbjct: 30 IHPLVIFNVCDCFVR-RPDSAERVIGTLLGSILPDGTVDIRNSYAVPHNESSDQVAV---DIDYHHNMLASHLKVNSKETIVGWYSTGAGVNGGSSLIHDFYAREVPNPIHLTVDTGFTNGEGTIKAF-----VSSNLSLGDRQLVAHFQEIPVDLRMVDAERVGFDVL----KATSVDKLPNDLEGMELTMERLLTLINDVYKYVDSVVGGQIAPDNNIGRFIADAVASLPKL 250
BLAST of FC929885 vs. ExPASy Swiss-Prot
Match: EI3F1_DROMO (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila mojavensis GN=eIF3-S5-1 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.259e-20 Identity = 71/247 (28.74%), Postives = 127/247 (51.42%), Query Frame = 2 Query: 8 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDV------KDTTISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAEXNQAF 730 V VHP+VL +VD + R D+ RV+G LLGS KG V+V+N + VP +E D + +Y MY + +++NA E+VVGW++TG ++ + IH+ + NPV + +D + + +AY ++ K+ +F +P E+ ++E E G++ L + V + T++ + + A K L + L I Y+D VI K+ ++ + L D+ + +P++ + Q F Sbjct: 8 VRVHPVVLFQVVDAFERRNADSH-RVIGTLLGSVDKGVVEVTNCFCVPHKEHDDQVEA---ELSYALDMYDLNRKVNANENVVGWWATGNEVTNHSSVIHEYYARECNNPVHLTVDTSLQSGRMGLRAYICIQLGVPGG--KTGCMFTPIPVELTSYEPETFGLKLLQKTVTVSPAHRPKTVAPMLDLAQISEAATK-LQSLLDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMTHEQFTQMF 247
BLAST of FC929885 vs. ExPASy Swiss-Prot
Match: EI3F1_DROWI (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila willistoni GN=eIF3-S5-1 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.804e-20 Identity = 72/249 (28.92%), Postives = 128/249 (51.41%), Query Frame = 2 Query: 8 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDV------KDTTISTLAN--EVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAEXNQAF 730 V VHP+VL +VD + R D+ RV+G LLGS KG V+V+N + VP +E D + +Y MY + +++N+ E VVGW++TG ++ + IH+ + NPV V +D + + +AY ++ KS +F +P E+ ++E E G++ L + V + T+ + + +++ T L+ L L I Y+D VI K+ ++ + L D+ + +P++ + Q F Sbjct: 8 VRVHPVVLFQVVDAFERRNADSH-RVIGTLLGSVDKGVVEVTNCFCVPHKEHDDQVEA---ELSYALDMYELNRKVNSNESVVGWWATGNEVTNHSSVIHEYYARECNNPVHVTVDTSLQGGRMGLRAYVCIQLGVPGG--KSGCMFTPIPVELTSYEPETFGLKLLQKTVGVSPAHRPKTVPPMLDLAQISEASTKLQSL---LDLILKYVDDVIAHKVTPDNAVGRQLLDLIHAVPHMTHEQFTQMF 247
BLAST of FC929885 vs. ExPASy Swiss-Prot
Match: EIF3F_ANOGA (Eukaryotic translation initiation factor 3 subunit F OS=Anopheles gambiae GN=eIF3-S5 PE=3 SV=3) HSP 1 Score: 98.5969 bits (244), Expect = 3.662e-20 Identity = 70/248 (28.23%), Postives = 124/248 (50.00%), Query Frame = 2 Query: 8 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDV-------KDTTISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAEXNQAF 730 V VHP+VL IVD Y R D+ +RV+G LLGS KG V+V+N + +P +E + Y +Y + +R+NA E++VGW++TG ++ + IH+ + NPV + +D + KAY V KS +F + E+ ++E E +G++ ++ + + T+S + ++ A L A L ++ Y++ V+ EK + + L D+ + +PN+ + Q F Sbjct: 12 VRVHPVVLFQIVDAYERRNADS-ERVIGTLLGSVDKGVVEVTNCFCLPHKEHTDQVEA---ELGYASDLYELNQRVNASENIVGWWATGQEVTNHSSVIHEYYARECTNPVHLTLDTSLTGARMGIKAYVCVSLGVPGG--KSGCMFTPINVEVTSYEPEIVGLQLCMKTIGVQSNPSRPRTVSPML-DLAQVTDASDKLLALLSDVLAYVEDVLSEKQQPENTVGRALLDLIHSVPNMTGDQFAQMF 252
BLAST of FC929885 vs. ExPASy Swiss-Prot
Match: EI3F1_DROVI (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila virilis GN=eIF3-S5-1 PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.783e-20 Identity = 71/249 (28.51%), Postives = 128/249 (51.41%), Query Frame = 2 Query: 8 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDV------KDTTISTLAN--EVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAEXNQAF 730 V VHP+VL +VD + R D+ RV+G LLGS KG V+V+N + VP +E D + +Y MY + +++NA E VVGW++TG ++ + IH+ + NPV + +D + + +AY ++ K+ +F +P E+ ++E E G++ L + V + T+ + + +++ T L+ L L I Y+D VI K+ ++ + L D+ + +P++ + Q F Sbjct: 8 VRVHPVVLFQVVDAFERRNADSH-RVIGTLLGSVDKGVVEVTNCFCVPHKEHDDQVEA---ELSYALDMYDLNRKVNANESVVGWWATGNEVTNHSSVIHEYYARECNNPVHLTVDTSLQGGRMGLRAYVCIQLGVPGG--KTGCMFTPIPVELTSYEPETFGLKLLQKTVGVSPAHRPKTVPPMLDLAQISEASTKLQSL---LELILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMTHEQFTQMF 247
BLAST of FC929885 vs. ExPASy Swiss-Prot
Match: EIF3F_AEDAE (Eukaryotic translation initiation factor 3 subunit F OS=Aedes aegypti GN=eIF3-S5 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.247e-20 Identity = 71/253 (28.06%), Postives = 125/253 (49.41%), Query Frame = 2 Query: 8 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDV-------KDTTISTLAN-----EVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAEXNQAF 730 V VHP+VL IVD Y R D+ +RV+G LLGS KG V+V+N + VP +E + Y +Y + +R+N E++VGW++TG ++ + IH+ + NP+ + +D + KAY V K+ +F + EI+++E E +G++ + + + T+S + + E + KL L G E+ Y++ V+ EK ++ + L D+ + +PN+ + Q F Sbjct: 12 VRVHPVVLFQIVDAYERRNADS-ERVIGTLLGSVDKGVVEVTNCFCVPHKEHADQVEA---ELGYASDLYDLNRRVNPSENIVGWWATGQEVTNHSSVIHEYYARECNNPIHLTLDTSLSAARMGIKAYVCVSLGVPGG--KTGCMFTPINVEISSYEPEVVGLQLCSKTIGVQQNASRPRTVSPMLDLAQITEASDKLLTLLG------EVLNYVEDVLAEKQQPDNSVGRALLDLIHSVPNMTSDQFAQMF 252
BLAST of FC929885 vs. ExPASy Swiss-Prot
Match: EIF3F_CULQU (Eukaryotic translation initiation factor 3 subunit F OS=Culex quinquefasciatus GN=eIF3-S5 PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 8.159e-20 Identity = 71/253 (28.06%), Postives = 124/253 (49.01%), Query Frame = 2 Query: 8 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDV-------KDTTISTL-----ANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAEXNQAF 730 V VHP+VL IVD Y R D+ +RV+G LLGS KG V+V+N + VP +E + Y +Y + +R+N E++VGW++TG ++ + IH+ + NP+ + +D + KAY V K+ +F + E+ ++E E +G+ + + + T+S + +E +GKL L G E+ Y++ V+ EK ++ + L D+ + +PN+ E + F Sbjct: 12 VRVHPVVLFQIVDAYERRNADS-ERVIGTLLGSVEKGIVEVTNCFCVPHKEHADQVEA---ELGYASDLYDLNRRVNPSENIVGWWATGQEVTNHSSVIHEYYARECNNPIHLTLDTSLTAARMGIKAYVCVSLGVPGG--KTGCMFTPINVEVTSYEPEVVGLSLCAKTIGVQSNPARPRTVSPMLDLAQVSEASGKLQTLLG------EVLNYVEDVLAEKQQPDNFVGRALLDLIHSVPNMKHEEFAKMF 252
BLAST of FC929885 vs. ExPASy Swiss-Prot
Match: EIF3F_PANTR (Eukaryotic translation initiation factor 3 subunit F OS=Pan troglodytes GN=EIF3F PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.392e-19 Identity = 65/239 (27.20%), Postives = 125/239 (52.30%), Query Frame = 2 Query: 8 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTG---KLTALKGLDARLRE----IRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNL 703 V +HP++L SIVD+Y R + RV+G LLG+ K +V+V+N ++VP E + + + D + ++MY + K+++ E ++GWY+TG + E+ + IH+ + PNP+ + +D + + KAY V + + +F + + A ++ E IGV+ +++ T S N V G L + G AR+++ + Y + V+ K+ ++ + L + N +P + Sbjct: 96 VRLHPVILASIVDSYER-RNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAV---DMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAY--VSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMK----TCFS--PNRVIGLSSDLQQVGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKI 322
BLAST of FC929885 vs. ExPASy Swiss-Prot
Match: EIF3F_MACFA (Eukaryotic translation initiation factor 3 subunit F OS=Macaca fascicularis GN=EIF3F PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.392e-19 Identity = 65/239 (27.20%), Postives = 125/239 (52.30%), Query Frame = 2 Query: 8 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTG---KLTALKGLDARLRE----IRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNL 703 V +HP++L SIVD+Y R + RV+G LLG+ K +V+V+N ++VP E + + + D + ++MY + K+++ E ++GWY+TG + E+ + IH+ + PNP+ + +D + + KAY V + + +F + + A ++ E IGV+ +++ T S N V G L + G AR+++ + Y + V+ K+ ++ + L + N +P + Sbjct: 96 VRLHPVILASIVDSYER-RNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAV---DMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAY--VSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMK----TCFS--PNRVIGLSSDLQQVGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKI 322 The following BLAST results are available for this feature:
BLAST of FC929885 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 61
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929885 ID=FC929885; Name=FC929885; organism=Citrus clementina; type=EST; length=732bpback to top |