FC929885
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929885 vs. ExPASy Swiss-Prot
Match: EIF3F_HUMAN (Eukaryotic translation initiation factor 3 subunit F OS=Homo sapiens GN=EIF3F PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.392e-19 Identity = 65/239 (27.20%), Postives = 125/239 (52.30%), Query Frame = 2 Query: 8 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTG---KLTALKGLDARLRE----IRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNL 703 V +HP++L SIVD+Y R + RV+G LLG+ K +V+V+N ++VP E + + + D + ++MY + K+++ E ++GWY+TG + E+ + IH+ + PNP+ + +D + + KAY V + + +F + + A ++ E IGV+ +++ T S N V G L + G AR+++ + Y + V+ K+ ++ + L + N +P + Sbjct: 92 VRLHPVILASIVDSYER-RNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAV---DMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAY--VSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMK----TCFS--PNRVIGLSSDLQQVGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKI 318
BLAST of FC929885 vs. ExPASy Swiss-Prot
Match: EI3F1_DROYA (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila yakuba GN=eIF3-S5-1 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.392e-19 Identity = 71/249 (28.51%), Postives = 127/249 (51.00%), Query Frame = 2 Query: 8 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDV------KDTTISTLAN--EVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAEXNQAF 730 V VHP+VL +VD + R D+ RV+G LLGS KG V+V+N + VP +E D + +Y MY + +++N+ E VVGW++TG + + IH+ + NPV + +D + + +AY ++ KS +F +P E+ ++E E G++ L + V + T+ + + +++ T L+ L L I Y+D VI K+ ++ + L D+ + +P++ + Q F Sbjct: 8 VRVHPVVLFQVVDAFERRNADSH-RVIGTLLGSVDKGVVEVTNCFCVPHKEHDDQVEA---ELSYALDMYDLNRKVNSNESVVGWWATGNDVTNHSSVIHEYYARECNNPVHLTVDTSLQGGRMGLRAYVCIQLGVPGG--KSGCMFTPIPVELTSYEPETFGLKLLQKTVGVSPAHRPKTVPPMLDLAQISEASTKLQSL---LDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMTHEQFTQMF 247
BLAST of FC929885 vs. ExPASy Swiss-Prot
Match: EI3F1_DROSI (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila simulans GN=eIF3-S5-1 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.392e-19 Identity = 71/249 (28.51%), Postives = 127/249 (51.00%), Query Frame = 2 Query: 8 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDV------KDTTISTLAN--EVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAEXNQAF 730 V VHP+VL +VD + R D+ RV+G LLGS KG V+V+N + VP +E D + +Y MY + +++N+ E VVGW++TG + + IH+ + NPV + +D + + +AY ++ KS +F +P E+ ++E E G++ L + V + T+ + + +++ T L+ L L I Y+D VI K+ ++ + L D+ + +P++ + Q F Sbjct: 8 VRVHPVVLFQVVDAFERRNADSH-RVIGTLLGSVDKGVVEVTNCFCVPHKEHDDQVEA---ELSYALDMYDLNRKVNSNESVVGWWATGNDVTNHSSVIHEYYARECNNPVHLTVDTSLQGGRMGLRAYVCIQLGVPGG--KSGCMFTPIPVELTSYEPETFGLKLLQKTVGVSPAHRPKTVPPMLDLAQISEASTKLQSL---LDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMTHEQFTQMF 247
BLAST of FC929885 vs. ExPASy Swiss-Prot
Match: EI3F1_DROSE (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila sechellia GN=eIF3-S5-1 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.392e-19 Identity = 71/249 (28.51%), Postives = 127/249 (51.00%), Query Frame = 2 Query: 8 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDV------KDTTISTLAN--EVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAEXNQAF 730 V VHP+VL +VD + R D+ RV+G LLGS KG V+V+N + VP +E D + +Y MY + +++N+ E VVGW++TG + + IH+ + NPV + +D + + +AY ++ KS +F +P E+ ++E E G++ L + V + T+ + + +++ T L+ L L I Y+D VI K+ ++ + L D+ + +P++ + Q F Sbjct: 8 VRVHPVVLFQVVDAFERRNADSH-RVIGTLLGSVDKGVVEVTNCFCVPHKEHDDQVEA---ELSYALDMYDLNRKVNSNESVVGWWATGNDVTNHSSVIHEYYARECNNPVHLTVDTSLQGGRMGLRAYVCIQLGVPGG--KSGCMFTPIPVELTSYEPETFGLKLLQKTVGVSPAHRPKTVPPMLDLAQISEASTKLQSL---LDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMTHEQFTQMF 247
BLAST of FC929885 vs. ExPASy Swiss-Prot
Match: EI3F1_DROME (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila melanogaster GN=eIF3-S5-1 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.392e-19 Identity = 71/249 (28.51%), Postives = 127/249 (51.00%), Query Frame = 2 Query: 8 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDV------KDTTISTLAN--EVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAEXNQAF 730 V VHP+VL +VD + R D+ RV+G LLGS KG V+V+N + VP +E D + +Y MY + +++N+ E VVGW++TG + + IH+ + NPV + +D + + +AY ++ KS +F +P E+ ++E E G++ L + V + T+ + + +++ T L+ L L I Y+D VI K+ ++ + L D+ + +P++ + Q F Sbjct: 8 VRVHPVVLFQVVDAFERRNADSH-RVIGTLLGSVDKGVVEVTNCFCVPHKEHDDQVEA---ELSYALDMYDLNRKVNSNESVVGWWATGNDVTNHSSVIHEYYARECNNPVHLTVDTSLQGGRMGLRAYVCIQLGVPGG--KSGCMFTPIPVELTSYEPETFGLKLLQKTVGVSPAHRPKTVPPMLDLAQISEASTKLQSL---LDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMTHEQFTQMF 247
BLAST of FC929885 vs. ExPASy Swiss-Prot
Match: EI3F1_DROER (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila erecta GN=eIF3-S5-1 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.392e-19 Identity = 71/249 (28.51%), Postives = 127/249 (51.00%), Query Frame = 2 Query: 8 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDV------KDTTISTLAN--EVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAEXNQAF 730 V VHP+VL +VD + R D+ RV+G LLGS KG V+V+N + VP +E D + +Y MY + +++N+ E VVGW++TG + + IH+ + NPV + +D + + +AY ++ KS +F +P E+ ++E E G++ L + V + T+ + + +++ T L+ L L I Y+D VI K+ ++ + L D+ + +P++ + Q F Sbjct: 8 VRVHPVVLFQVVDAFERRNADSH-RVIGTLLGSVDKGVVEVTNCFCVPHKEHDDQVEA---ELSYALDMYDLNRKVNSNESVVGWWATGNDVTNHSSVIHEYYARECNNPVHLTVDTSLQGGRMGLRAYVCIQLGVPGG--KSGCMFTPIPVELTSYEPETFGLKLLQKTVGVSPAHRPKTVPPMLDLAQISEASTKLQSL---LDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMTHEQFTQMF 247
BLAST of FC929885 vs. ExPASy Swiss-Prot
Match: EI3F1_DROAN (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila ananassae GN=eIF3-S5-1 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.818e-19 Identity = 71/247 (28.74%), Postives = 123/247 (49.80%), Query Frame = 2 Query: 8 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDV------KDTTISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAEXNQAF 730 V VHP+VL +VD Y R D+ RV+G LLGS KG V+V+N + VP +E D + +Y MY + +++N E VVGW++TG + + IH+ + NPV + +D + + +AY ++ KS +F +P E+ ++E E G++ L + V + T+ + ++ A + L L I Y+D VI K+ ++ + L D+ + +P++ + Q F Sbjct: 8 VRVHPVVLFQVVDAYERRNADSH-RVIGTLLGSVDKGVVEVTNCFCVPHKEHDDQVEA---ELSYALDMYDLNRKVNPNESVVGWWATGNDVTNHSSVIHEYYARECNNPVHLTVDTSLQGGRMGLRAYVCIQLGVPGG--KSGCMFTPIPVELTSYEPETFGLKLLQKTVGVSPAHRPKTVPPML-DLAQISEASQKLQQLLDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMTHEQFTQMF 247
BLAST of FC929885 vs. ExPASy Swiss-Prot
Match: EI3F1_DROGR (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila grimshawi GN=eIF3-S5-1 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.374e-19 Identity = 69/247 (27.94%), Postives = 126/247 (51.01%), Query Frame = 2 Query: 8 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDV------KDTTISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAEXNQAF 730 V VHP+VL +VD + R D+ RV+G LLGS KG V+V+N + VP +E D + +Y MY + +++N+ E VVGW++TG ++ + IH+ + NPV + +D + + +AY ++ K+ +F +P E+ ++E E G++ L + V + T+ + ++ A + L + L I Y+D VI K+ ++ + L D+ + +P++ + Q F Sbjct: 8 VRVHPVVLFQVVDAFERRNADSH-RVIGTLLGSVDKGVVEVTNCFCVPHKEHDDQVEA---ELSYALDMYDLNRKVNSNESVVGWWATGNEVTNHSSVIHEYYARECNNPVHLTVDTSLQGGRMGLRAYVCIQLGVPGG--KTGCMFTPIPVELTSYEPETFGLKLLQKTVGVSPAQRPKTVPPML-DLAQISEASQKLQSLLDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMTHEQFTQMF 247
BLAST of FC929885 vs. ExPASy Swiss-Prot
Match: EIF3F_MOUSE (Eukaryotic translation initiation factor 3 subunit F OS=Mus musculus GN=Eif3f PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.049e-19 Identity = 65/239 (27.20%), Postives = 125/239 (52.30%), Query Frame = 2 Query: 8 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTG---KLTALKGLDARLRE----IRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNL 703 V +HP++L SIVD+Y R + RV+G LLG+ K +V+V+N ++VP E + + + D + ++MY + K+++ E ++GWY+TG + E+ + IH+ + PNP+ + +D + + KAY V + + +F + + A ++ E IGV+ +++ T S N V G L + G AR+++ + Y + V+ K+ ++ + L + N +P + Sbjct: 96 VRLHPVILASIVDSYER-RNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAV---DMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSRESPNPIHLTVDTGLQHGRMSIKAY--VSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMK----TCFS--PNRVIGLSSDLQQVGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKI 322
BLAST of FC929885 vs. ExPASy Swiss-Prot
Match: EI3F1_DROPS (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila pseudoobscura pseudoobscura GN=eIF3-S5-1 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.010e-18 Identity = 68/249 (27.31%), Postives = 128/249 (51.41%), Query Frame = 2 Query: 8 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDV------KDTTISTLAN--EVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAEXNQAF 730 V VHP+VL +VD + R ++ RV+G LLGS KG V+V+N + VP +E D + +Y MY + +++N+ E VVGW++TG + + IH+ + NPV + +D + + ++Y ++ K+ +F +P E+ ++E E G++ L + V + T+ + + +++ T L+ L L I Y+D VI K+ ++ + L D+ + +P+++ + Q F Sbjct: 8 VRVHPVVLFQVVDAFERRNAESH-RVIGTLLGSVEKGVVEVTNCFCVPHKEHDDQVEA---ELSYALDMYDLNRKVNSNEAVVGWWATGNDVTNHSSVIHEYYARECNNPVHLTVDTSLQGGRMGLRSYVCIQLGVPGG--KTGCMFTPIPVELTSYEPETFGLKLLQKTVGVAPANRPKTVPPMLDLAQISEASTKLQSL---LDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMSHEQFTQMF 247 The following BLAST results are available for this feature:
BLAST of FC929885 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 61
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929885 ID=FC929885; Name=FC929885; organism=Citrus clementina; type=EST; length=732bpback to top |