FC929885
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929885 vs. ExPASy Swiss-Prot
Match: EIF3F_USTMA (Eukaryotic translation initiation factor 3 subunit F OS=Ustilago maydis GN=UM00175 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.473e-16 Identity = 67/217 (30.88%), Postives = 111/217 (51.15%), Query Frame = 2 Query: 8 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLF------HNYVPNPVLVIID-VQPKELGIPTKAYYDVEEVKENATQKSQK-VFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANE-VTGKLTALKGLDARLREIRGYLDLVI 631 V VHP+ L SI+D+Y R D + RV+G LLG+ + +++ N +AVP ED ++ + +D YH SMY + +++ E +VGWY+T P+L I + H V + ID +P LGI K+Y AT K++ VF+ +P+ + H E +++S LA++ ++ LT L L L++++ LD V+ Sbjct: 32 VHVHPVALFSILDHYLR-RNDGQHRVIGTLLGTRTESEIEIKNCFAVPHLEDAEEGQVQ-VDMEYHRSMYELCQKVRPDEVIVGWYATSPELNTYSALIQDFYSRETAPHQAVHLTMDTTIDGSKPSGLGI--KSYI---SSPLGATPKAENCVFLPLPTNL-LHSTPE-----------HSSLSLLASQNISSPLTDLDALAVSLKQVQSQLDRVL 229
BLAST of FC929885 vs. ExPASy Swiss-Prot
Match: EIF3F_DICDI (Eukaryotic translation initiation factor 3 subunit F OS=Dictyostelium discoideum GN=eif3f PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.592e-15 Identity = 61/239 (25.52%), Postives = 111/239 (46.44%), Query Frame = 2 Query: 8 VIVHPLVLLSIVDNYNR--VAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPN--PVLVIID--VQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLN 706 V VHP+V+ +I+D+Y R V +D RV+G LLG + G +++ N + V E ++ ++ Y M + + + +E ++GWY+TG + EN + I+ + + + N P+ + +D + +GI Y + N F +P EI E E G+E + + D ++L +E+ +L LD L I Y++ V ++ + + L LP N Sbjct: 15 VKVHPVVIFNILDHYIRRNVGQD---RVIGTLLGFNNDGVLEIRNCFPVVHSETEQIA----VEMEYQRKMLDLHLKSSPREPIIGWYATGNDINENSVHINNFYRDEMGNSTPIHLTVDTGLTNDTMGIHA---YMAHNLSLNPESSLGSYFSQLPLEILTFEAENAGLESIAQTKYDQQSTSLLSELESLQGSLTKLDEMLESITSYIESVEKGEIQGDPRLGRFLAKTIQALPKAN 243
BLAST of FC929885 vs. ExPASy Swiss-Prot
Match: EIF3F_BOMMO (Eukaryotic translation initiation factor 3 subunit F OS=Bombyx mori GN=eIF3-S5 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.592e-15 Identity = 59/209 (28.23%), Postives = 102/209 (48.80%), Query Frame = 2 Query: 8 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDV----KDTTISTLANEVTGKLTALKGLDARLREIRGYLD 622 V VHP+VL IVD Y R D+ RV+G L G+S KG V+V+N + VP +E + NY +Y + +R+N+ E +VGW++TG ++ + IH+ + PV V +D + +AY V N Q +F V + +E E +G++ + V + ++ +++ ++A L++ L + Y D Sbjct: 7 VKVHPVVLFQIVDAYERRNADSH-RVIGTLWGTSDKGVVEVTNCFCVPHKEHADQVEA---ELNYAMDVYELNRRVNSSESIVGWWATGNEVTNHSSVIHEYYSRECREPVHVTLDTSLAGGRMGLRAYVCVPLGVPNGKQGC--MFTPVDVTLTCYEPEIVGLQVCQKTVSGGGRGSSGVAAGSDLAQVMSAASSLESLLEQALQYAD 209
BLAST of FC929885 vs. ExPASy Swiss-Prot
Match: CSN6A_ARATH (COP9 signalosome complex subunit 6a OS=Arabidopsis thaliana GN=CSN6A PE=1 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.761e-14 Identity = 63/255 (24.71%), Postives = 115/255 (45.10%), Query Frame = 2 Query: 14 VHPLVLLSIVDNYNRVAKDTRK----------------------RVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIID--VQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHL--LRDVKDTTIST-LANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLP 697 +HPLV+++I D+Y RV RV G ++G TV++ NS+ + + DP LD ++ E ++K++ +++GWYSTG E+D+ IH+ + +PV V+++ + + +P Y V + Q +F H I E E I V+H+ L+ + +T LA +TG +A+K L++R+R + L + ++ +L + + LP Sbjct: 13 LHPLVIVNISDHYTRVKTQLNPPASICASGHGSNNGEAMFQQNPRVYGCVIGVQRGRTVEIFNSFELLY-----DPSTQTLDRSFLEKKQELYKKVFPDFYILGWYSTGSDAEESDMHIHKALMDINESPVYVLLNPAINHTQKDLPVTIYESELHVIDGI---PQLIFAHTSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLYQNLAAMQKGDKSCDNSVLRQVSSLLRRLP 259
BLAST of FC929885 vs. ExPASy Swiss-Prot
Match: EIF3F_MALGO (Eukaryotic translation initiation factor 3 subunit F OS=Malassezia globosa (strain ATCC 96807 / CBS 7966) GN=MGL_1945 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.122e-14 Identity = 71/257 (27.63%), Postives = 114/257 (44.36%), Query Frame = 2 Query: 8 VIVHPLVLLSIVDNYNRVAKD-TRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDI----------HQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHL-----------------LRDVK---DTTISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVF 685 V VHP+ L SI+D+Y R +D ++ RV+G LLG+ + V+V N++AVP E +DP LD +H M + R+ E V+GWYST +L N I HQ H + + +V + G+ + Y V + + F+ +P+ + E+ + HL L DV+ D ++ + + G++ K + L + G + +DE L L HLQDVF Sbjct: 33 VKVHPVALFSILDHYLR--RDVSQPRVIGTLLGTRSESEVEVRNAFAVPHGES-QDPWQIHLDAEHHRRMLDLHLRVRPDEVVLGWYSTNTELNSNSALIQDHYSRETAPHQAIH------LTLNTNVADEANGLGVQCY--VSALLGAMAKPEDCAFLSLPTHLLMSTPEQTALRHLAAPKPQNITDLDALKASLEDVQAKLDRVLTYVRRVLAGEVEGDKAVGRYLSDTIGVVPAGLDESL-LESLFQSHLQDVF 277
BLAST of FC929885 vs. ExPASy Swiss-Prot
Match: EIF3F_ASPOR (Eukaryotic translation initiation factor 3 subunit F OS=Aspergillus oryzae GN=AO090005001590 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.490e-13 Identity = 66/250 (26.40%), Postives = 118/250 (47.20%), Query Frame = 2 Query: 8 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGS-SFKGT-VDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNY----VPNP-VLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHL--LRDVKDTTISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAEXNQAF 730 V++HP L SI+D+ R D ++RV+G LLG+ S GT V++ ++AV E + D Y + M ++ + N KE +VGWY+T +L I + P+P V + + +P + + T+AY F+ VP EI E E+ G+E + RDV ++ + + ++ A++ + + + Y++ VIDE+ P + + L + L P + A+ + F Sbjct: 30 VVIHPQALFSILDHSLRRNAD-QERVIGTLLGTRSEDGTEVEIRTTFAVGHTETTDQVEV---DMEYQKQMLALHLKANPKEVLVGWYATSSELNTFSALIQNFYSGQGDGTFPHPAVHLTVSTEPGK-DVETRAYISAPVGVTAERAADSAAFIPVPYEIRYGETEKSGLESIAAARDV-ESRAANIFTDIEALERAVEEVLGMIDRVSKYVESVIDEEAPASTALGQFLLNALALAPKVEPADIERDF 273
BLAST of FC929885 vs. ExPASy Swiss-Prot
Match: EIF3F_ASPTN (Eukaryotic translation initiation factor 3 subunit F OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=ATEG_08559 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.397e-13 Identity = 66/250 (26.40%), Postives = 117/250 (46.80%), Query Frame = 2 Query: 8 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGS-SFKGT-VDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNY----VPNP-VLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHL--LRDVKDTTISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAEXNQAF 730 V++ P L SI+D+ R D ++RV+G LLG+ S GT V++ +++AV E + D Y + M ++ + N KE +VGWY+T +L I + P+P V + + +P + I T+AY F+ VP EI E E+ G+E + RD ++ + L ++ A++ + + + Y++ VIDE+ P + + L + L P + A+ + F Sbjct: 30 VVIQPQALFSILDHSLRRNAD-QERVIGTLLGTRSEDGTEVEIRSTFAVGHTETTDQVEV---DMEYQKQMLALHLKANPKEVLVGWYATSSELNTFSALIQNFYSGQGDGTFPHPAVHLTVSTEPGK-DIETRAYISAPVGVTAERAADSAAFIPVPHEIRYGETEKSGLEAIAAARDAEERA-ANLFTDIEALERAIEEVLGMIDRVSRYVESVIDEEAPASTALGQFLLNALALAPKVEPADIERDF 273
BLAST of FC929885 vs. ExPASy Swiss-Prot
Match: EI3F2_DROAN (Eukaryotic translation initiation factor 3 subunit F-2 OS=Drosophila ananassae GN=eIF3-S5-2 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.262e-12 Identity = 59/211 (27.96%), Postives = 101/211 (47.87%), Query Frame = 2 Query: 5 KVIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPN--PVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTGKLTALKGLDARLREIRGYLDLVI 631 KV++ PLVL I+D+Y R KD +++G LLG S + ++N + V ++ D LD Y M + + +E V+GW+STG + + L +H + + P+ +++D K + T+ Y VE T+ +F VP E+A+ E + LR ++ + A +V L L + RE++ LDLV+ Sbjct: 10 KVVLQPLVLFQIIDSYERRPKDA-TQIIGTLLGRSNGKEITITNCFTV-LHKEHPDSARIDLDLGYANDMLELNQLTYPQEKVLGWFSTGKSVSRSALLLHDYYSRECSDGQPLHLLVDATLKGQRLSTRLYCGVEMGVPGGTK--GLMFSLVPLEMASDSAEMVA----LRLMQKQNLQPGAKQVGRILPELVQVVEATRELQLRLDLVL 212
BLAST of FC929885 vs. ExPASy Swiss-Prot
Match: EIF3F_NEOFI (Eukaryotic translation initiation factor 3 subunit F OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=NFIA_016300 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.648e-12 Identity = 68/255 (26.67%), Postives = 116/255 (45.49%), Query Frame = 2 Query: 8 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGS-SFKGT-VDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNY----VPNP-VLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTGKLTALKGLDARLREIRG-------YLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAEXNQAF 730 V++ P + SI+D+ R D ++RV+G LLG+ S GT V++ +++AV E + D Y + M ++ + N KE +VGWY+T +L I + P+P V + + +P + I T+AY F+ VP EI E E+ G+E + KD + T T ++ L+ + E+ G Y++ VIDE+ P + + L + L P + A+ + F Sbjct: 30 VVIQPQAIFSILDHSLRRNAD-QERVIGTLLGTRSEDGTEVEIRSTFAVGHTETTDQVEV---DMEYQKQMLALHLKANPKEVLVGWYATSSELNTFSALIQNFYSGQGDGTWPHPAVHLTVSTEPGK-DIETRAYISAPVGVTAERAADSAAFIPVPYEIRYGEAEKSGLE-TIASAKDA-----ESRATNIFTDIEALERAIEEVLGMIDRVSRYVESVIDEEAPASTALGQFLLNALALAPKVEPADIERDF 273
BLAST of FC929885 vs. ExPASy Swiss-Prot
Match: EIF3F_ASPNC (Eukaryotic translation initiation factor 3 subunit F OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=An08g00880 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.648e-12 Identity = 63/249 (25.30%), Postives = 114/249 (45.78%), Query Frame = 2 Query: 8 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGS-SFKGT-VDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNY----VPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHL--LRDVKDTTISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAEXNQAF 730 V++ P L SI+D+ R D ++RV+G LLG+ S GT V++ +++AV E + D Y + M ++ + N KE +VGWY+T +L I + P+P + + I T+AY F+ VP EI E E+ G+E + RD ++ + + ++ A++ + + + Y++ VIDE+ P + + +L + L P + A+ + F Sbjct: 30 VVIQPQALFSILDHSLRRNAD-QERVIGTLLGTRSEDGTEVEIRSTFAVGHTETTDQVEV---DMEYQKQMLALHLKANPKEVLVGWYATSSELNTFSALIQNFYSGQGDGTWPHPAVHLTVSTEAGKDIETRAYISAPVGVTAERAADSAAFIPVPYEIRYGEAEKSGLEAIGAARDAEERR-ANIFTDIEALERAIEDVLGMIDRVSRYVESVIDEEAPASTALGQYLLNTLALAPKVEPADIERDF 273 The following BLAST results are available for this feature:
BLAST of FC929885 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 61
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929885 ID=FC929885; Name=FC929885; organism=Citrus clementina; type=EST; length=732bpback to top |