FC929889
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929889 vs. ExPASy Swiss-Prot
Match: GLGA_XANAC (Glycogen synthase OS=Xanthomonas axonopodis pv. citri GN=glgA PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.763e-29 Identity = 77/227 (33.92%), Postives = 117/227 (51.54%), Query Frame = 1 Query: 1 VNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKN-GMAQDLSWKGPAKKW 678 VNG+D W+P TD+Y+ + + + + +A GL P+ + RL QKG D++ P + QI V+G G+ +E+Q+ +L YP + F LA + AGADF+L+PSRFEPCGL Q++A R+G +PI +TGGL+DTV++G TGF SV+ A+ + RA T+ +L M+ M + W KK+ Sbjct: 243 VNGIDAS-WDPRTDQYLDSHFSVNQWQGRQANAAQVRKA-FGLRESAG-PLFAVVSRLVHQKGLDLICEVAPQIVAAGGQIAVIGGGEPEIEQQVAELTRRYPGQVGAFIGFEEGLARRMFAGADFLLMPSRFEPCGLSQMYAQRFGCLPIAHATGGLIDTVDDGVTGFLFQHASVE----------ALRRCLERAFRTFRLPSLLSAMRRAAMLRPSGWDVAGKKY 456
BLAST of FC929889 vs. ExPASy Swiss-Prot
Match: GLGA_DEIGD (Glycogen synthase OS=Deinococcus geothermalis (strain DSM 11300) GN=glgA PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.763e-29 Identity = 87/227 (38.33%), Postives = 115/227 (50.66%), Query Frame = 1 Query: 1 VNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGPAKKW 678 +NG+D WNP TD I D + K L+AE GL + P++G + RL QKG D+L A+P + E ++VLG G + L Y + V+ N LAH I AGAD +PSRFEPCGL Q+ A+RYGT+PIV TGGLVDTV G GF+ + + A++T R A T MK GM D SW+G A+ + Sbjct: 231 LNGLDQDRWNPRTDPDIRPYADPA----GKAANGSVLRAEFGLD---DAPILGVVSRLANQKGIDLLIEALPELV-ERWNVVVLGGGDPLLTAALHGWA--YHPRVAFVSGLNEALAHRIYAGADAFAMPSRFEPCGLSQMIALRYGTLPIVRETGGLVDTV-PGDVGFRFADATTE----------ALATACRDARTTLEDVVEWQSRMKRGMELDFSWEGSARHY 436
BLAST of FC929889 vs. ExPASy Swiss-Prot
Match: GLGA_DEIDV (Glycogen synthase OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=glgA PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.763e-29 Identity = 84/227 (37.00%), Postives = 116/227 (51.10%), Query Frame = 1 Query: 1 VNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKW 678 +NG+D + WNP TD + D + K +AL+ E GL PV+G + RL +QKG D+L A+P + N ++VLG G + LE + N LAH I AG+D +PSRFEPCGL Q+ AMRYGT+P+V TGGLVDTV GF+ P A+ ++A A + Q+ E + MA D SW GPA+++ Sbjct: 231 INGLDQERWNPRTDPDVPAYSDLA----GKAAATQALRTEFGLD---KAPVLGVVSRLADQKGMDLLIEALPRLV-HNWNVVVLGGGDPLLTAALEGWA--QHPRVSFAQGMNEALAHQIYAGSDAFAMPSRFEPCGLSQMIAMRYGTLPVVRETGGLVDTVPPD-VGFRF----------QPATPEALVEACQQARAAFEDQSDWEARVARAMALDFSWDGPAREY 436
BLAST of FC929889 vs. ExPASy Swiss-Prot
Match: GLGA_YERP3 (Glycogen synthase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=glgA PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 8.833e-29 Identity = 74/226 (32.74%), Postives = 118/226 (52.21%), Query Frame = 1 Query: 1 VNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-----EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG-TQALAEMMKNGMAQDLSWK 660 +NG+D W+P +D + +YDA + AK + K LQ +GL + + P+ + RL QKG D++ A+P + Q++VLG+G +++ + + ++ +H IIAG+D IL+PSRFEPCGL QL+ ++YGT+P+V TGGL DTV E G G +CEA A+ +RRA + + + ++ M D W+ Sbjct: 245 LNGVDSDIWDPQSDTLLPTRYDAEN-LQAKAINKTHLQTAMGLQLTESKPIFAVVSRLTAQKGLDLVLEALPELLALGGQLVVLGSGDTTLQEAFLAAAAEHSGQVGVQIGYHEAFSHRIIAGSDVILVPSRFEPCGLTQLYGLKYGTLPLVRHTGGLADTVVDCALENLADGSASGFVFNECEA------QALVKAIRRAFVLWSRPKHWRHVQRHAMRLDFGWQ 463
BLAST of FC929889 vs. ExPASy Swiss-Prot
Match: GLGA_ENT38 (Glycogen synthase OS=Enterobacter sp. (strain 638) GN=glgA PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.154e-28 Identity = 71/230 (30.87%), Postives = 123/230 (53.48%), Query Frame = 1 Query: 1 VNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQ-MGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEE 684 +NG+D + WNP TD + ++ +V D K K LQ +GL V+ +P+ + RL QKG D++ A+P +++ Q+ +LG G +++ +P + ++ +H ++ G+D IL+PSRFEPCGL QL+ ++YGT+P+V TGGL DTV + T + + A + + ++ +RRA + +L + + MA D SW A+ + + Sbjct: 245 LNGVDEKIWNPETDLLLASRFSRDSVED-KAENKRQLQVAMGLKVNDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEHPGQVGVQIGYHEAFSHRLMGGSDVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD--TSLENLADGIATGFAFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWHVAAQSYRD 471
BLAST of FC929889 vs. ExPASy Swiss-Prot
Match: GLGA_XANOR (Glycogen synthase OS=Xanthomonas oryzae pv. oryzae GN=glgA PE=3 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 1.507e-28 Identity = 77/227 (33.92%), Postives = 116/227 (51.10%), Query Frame = 1 Query: 1 VNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA-LAEMMKNGMAQDLSWKGPAKKW 678 VNG+D W+P TD+Y+ + + + + +A GL P+ + RL QKG D++ P + QI V+G G+ +E+Q+ +L YP + F LA + AGADF+L+PSRFEPCGL Q++A R+G +PI +TGGL+DTV++G TGF SV+ A+ + RA T+ LA M + M + W K+ Sbjct: 278 VNGIDAS-WDPRTDEYLDSHFSVNQWQGRQDNAAQVRKA-FGLRESTG-PLFAVVSRLVHQKGLDLICEVAPQIVAAGGQIAVIGGGEPDIERQVAELTRRYPGQVGAFIGFEEGLARRMFAGADFLLMPSRFEPCGLSQMYAQRFGCLPIAHATGGLIDTVDDGVTGFLFQHASVE----------ALRRCLERAFRTFRLPGLLAAMRRAAMLRPSGWDVAGNKY 491
BLAST of FC929889 vs. ExPASy Swiss-Prot
Match: GLGA_XANOP (Glycogen synthase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=glgA PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.507e-28 Identity = 77/227 (33.92%), Postives = 116/227 (51.10%), Query Frame = 1 Query: 1 VNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA-LAEMMKNGMAQDLSWKGPAKKW 678 VNG+D W+P TD+Y+ + + + + +A GL P+ + RL QKG D++ P + QI V+G G+ +E+Q+ +L YP + F LA + AGADF+L+PSRFEPCGL Q++A R+G +PI +TGGL+DTV++G TGF SV+ A+ + RA T+ LA M + M + W K+ Sbjct: 278 VNGIDAS-WDPRTDEYLDSHFSVNQWQGRQDNAAQVRKA-FGLRESTG-PLFAVVSRLVHQKGLDLICEVAPQIVAAGGQIAVIGGGEPDIERQVAELTRRYPGQVGAFIGFEEGLARRMFAGADFLLMPSRFEPCGLSQMYAQRFGCLPIAHATGGLIDTVDDGVTGFLFQHASVE----------ALRRCLERAFRTFRLPGLLAAMRRAAMLRPSGWDVAGNKY 491
BLAST of FC929889 vs. ExPASy Swiss-Prot
Match: GLGA_XANOM (Glycogen synthase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=glgA PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.507e-28 Identity = 77/227 (33.92%), Postives = 116/227 (51.10%), Query Frame = 1 Query: 1 VNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA-LAEMMKNGMAQDLSWKGPAKKW 678 VNG+D W+P TD+Y+ + + + + +A GL P+ + RL QKG D++ P + QI V+G G+ +E+Q+ +L YP + F LA + AGADF+L+PSRFEPCGL Q++A R+G +PI +TGGL+DTV++G TGF SV+ A+ + RA T+ LA M + M + W K+ Sbjct: 278 VNGIDAS-WDPRTDEYLDSHFSVNQWQGRQDNAAQVRKA-FGLRESTG-PLFAVVSRLVHQKGLDLICEVAPQIVAAGGQIAVIGGGEPDIERQVAELTRRYPGQVGAFIGFEEGLARRMFAGADFLLMPSRFEPCGLSQMYAQRFGCLPIAHATGGLIDTVDDGVTGFLFQHASVE----------ALRRCLERAFRTFRLPGLLAAMRRAAMLRPSGWDVAGNKY 491
BLAST of FC929889 vs. ExPASy Swiss-Prot
Match: GLGA_AGRRK (Glycogen synthase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=glgA PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.507e-28 Identity = 79/227 (34.80%), Postives = 118/227 (51.98%), Query Frame = 1 Query: 1 VNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKW 678 VNG+D WNP TD I Y AST+ D K+ ++ GL D P+ + RL QKG D+LA+ + ++ +LG G +E L + + A +N ++H++ AG D I+IPSRFEPCGL QL+ +RYG VPIVA TGGL DT+ + + + PV + +RRA+ + + + +M K GM D+SW A+++ Sbjct: 245 VNGIDDGIWNPETDPMIARTYGASTLKDRAINRKQVVE-HFGLDDDDG-PIFCVVSRLTWQKGMDLLASISSEIVAMGGKLAILGAGDAALEGALFAAAGRHRGRVGVSAGYNEAMSHLMQAGCDAIIIPSRFEPCGLTQLYGLRYGCVPIVARTGGLNDTIIDANHAALQAKVATGIQ-FSPVTAEGLLQAIRRAIYLFQDRKVWTQMQKQGMKSDVSWGKSAERY 468
BLAST of FC929889 vs. ExPASy Swiss-Prot
Match: GLGA_XANCP (Glycogen synthase OS=Xanthomonas campestris pv. campestris GN=glgA PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.968e-28 Identity = 76/227 (33.48%), Postives = 116/227 (51.10%), Query Frame = 1 Query: 1 VNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKN-GMAQDLSWKGPAKKW 678 VNG+D W+P TD+Y+ + + + + +A GL P+ + RL QKG D++ P + QI V+G G+ +E+Q+ +L YP + F LA + AGADF+L+PSRFEPCGL Q++A R+G +PI +TGGL+DTV++G TGF S + A+ + RA T+ +L M+ M + W KK+ Sbjct: 243 VNGIDAS-WDPRTDEYLDSHFSVNHWQGRQANAAQVRKA-FGLRESTG-PLFAVVSRLVHQKGLDLICEVAPQIVAAGGQIAVIGGGEPEIEQQVAELTRRYPGQVGAFIGFEEGLARRMFAGADFLLMPSRFEPCGLSQMYAQRFGCLPIAHATGGLIDTVDDGVTGFLFQQASAE----------ALRRCLERAFRTFRLPSLLSAMRRAAMLRPSGWDVAGKKY 456 The following BLAST results are available for this feature:
BLAST of FC929889 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 364
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929889 ID=FC929889; Name=FC929889; organism=Citrus clementina; type=EST; length=695bpback to top |