FC929895
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: CH602_BRAJA (60 kDa chaperonin 2 OS=Bradyrhizobium japonicum GN=groL2 PE=2 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.552e-12 Identity = 50/141 (35.46%), Postives = 76/141 (53.90%), Query Frame = 1 Query: 160 GERARMASFVGAMAIADLVKTTLGPKGMDKIL-QSTGRGREVTVTNDGATILKSLHID----NPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALL---QKVVDNKENAE 558 G AR G + + VK TLGPKG + +L +S G R +T DG T+ K + ++ N A+++ +++ D GDGTT+ VLA ++RE K VAA ++PM + G MA E L+ +KV N+E A+ Sbjct: 9 GVDARDRMLRGVDILHNAVKVTLGPKGRNVVLDKSFGAPR---ITKDGVTVAKEIELEDKFENMGAQMVREVASKSADAAGDGTTTATVLAAAIVREGAKSVAAGMNPMDLKRGIDMAVEAVVADLVKNSKKVTSNEEIAQ 146
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: CH601_GLUDA (60 kDa chaperonin 1 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=groL1 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.552e-12 Identity = 54/177 (30.51%), Postives = 85/177 (48.02%), Query Frame = 1 Query: 160 GERARMASFVGAMAIADLVKTTLGPKGMDKIL-QSTGRGREVTVTNDGATILKSLHI----DNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRLKG 675 G AR G +AD VK TLGPKG + +L +S G R +T DG ++ K + + +N A+++ +++ +D GDGTT+ VLA ++RE K VAA ++PM + G A + L + AET + + +++SQ + G V V KG Sbjct: 9 GGDARQRMLRGVDILADAVKVTLGPKGRNVVLDKSFGAPR---ITKDGVSVAKEIELADKFENMGAQMVREVASKTNDVAGDGTTTATVLAQAIVREGAKAVAAGMNPMDLKRGIDKAVIAVVEELKKNTKKITTPAETAQVGTISANGEHEIGEMISQAMQKVGSEGVITVEEAKG 182
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: CH601_BURXL (60 kDa chaperonin 1 OS=Burkholderia xenovorans (strain LB400) GN=groL1 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.552e-12 Identity = 47/140 (33.57%), Postives = 74/140 (52.86%), Query Frame = 1 Query: 160 GERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHI----DNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDAL---LQKVVDNKENAE 558 G+ AR G +A+ VK TLGPKG + +L+ + G TVT DG ++ K + + N A+++ +++ D GDGTT+ VLA ++RE K VA+ ++PM + G A A + L + NKE A+ Sbjct: 9 GDSARAKMVEGVNILANAVKVTLGPKGRNVVLERSFGGP--TVTKDGVSVAKEIELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQSIVREGMKYVASGMNPMDLKRGIDKAVFAAIEELRKISKPCTTNKEIAQ 146
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: CH60_THICR (60 kDa chaperonin OS=Thiomicrospira crunogena (strain XCL-2) GN=groL PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.027e-12 Identity = 43/119 (36.13%), Postives = 66/119 (55.46%), Query Frame = 1 Query: 160 GERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHID----NPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAE 504 G AR G +AD VK TLGPKG + +L+ + TVT DG ++ + + ++ N A+++ ++S +D GDGTT+ VLA ++RE K VAA ++PM + G A E Sbjct: 8 GLDAREKMVEGINVLADAVKVTLGPKGRNVVLEKSFGAP--TVTKDGVSVAREIELEDKFMNMGAQMVKEVSSQTNDVAGDGTTTATVLAQSIVREGMKSVAAGMNPMDLNRGIHKAVE 124
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: CH60_THEAB (60 kDa chaperonin OS=Thermosipho africanus (strain TCF52B) GN=groL PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.027e-12 Identity = 50/173 (28.90%), Postives = 90/173 (52.02%), Query Frame = 1 Query: 163 ERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHID----NPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRL 669 E AR A G A+AD VK TLGPKG + +++ + T+TNDG +I K + ++ N A+++ +++ +D GDGTT+ VLA +++E K V A +P+ + G A + + K + K ++ +D+ +A +S + E G+L +A+ ++ Sbjct: 9 EEARRALERGVDAVADAVKITLGPKGRNVVIEKSWGSP--TITNDGVSIAKEIELEDKFENLGAQLVKEVASKTNDVAGDGTTTATVLAQAMIKEGIKNVTAGANPILVKRGIEKAVAAGVEEI--KKISKKLSS---TNDIAHVAS-------ISANSEEIGKLIAEAMEKV 167
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: CH60_STRSV (60 kDa chaperonin OS=Streptococcus sanguinis (strain SK36) GN=groL PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.027e-12 Identity = 57/178 (32.02%), Postives = 87/178 (48.88%), Query Frame = 1 Query: 169 ARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSL----HIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQK--VVDNKENAETFKSDLMKIAMTTLSSKI---LSQDKEHFGQLAVDAVMRLKG 675 AR + G +A+ VK TLGPKG + +L+ + +TNDG TI K + H +N AK++ +++ +D GDGTT+ VL ++RE K V A +P+ I G A A +AL V NKE + A+++ S K+ +S+ E G V + KG Sbjct: 11 ARSSMVRGVDILANTVKVTLGPKGRNVVLEKSFGSP--LITNDGVTIAKEIELEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVREGIKNVTAGANPIGIRRGIEAAVATAVEALKSNSVPVSNKE------AIAQVAAVSSRSEKVGEYISEAMEKVGNDGVITIEESKG 180
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: CH60_STRSA (60 kDa chaperonin OS=Streptococcus sanguis GN=groL PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.027e-12 Identity = 57/178 (32.02%), Postives = 87/178 (48.88%), Query Frame = 1 Query: 169 ARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSL----HIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQK--VVDNKENAETFKSDLMKIAMTTLSSKI---LSQDKEHFGQLAVDAVMRLKG 675 AR + G +A+ VK TLGPKG + +L+ + +TNDG TI K + H +N AK++ +++ +D GDGTT+ VL ++RE K V A +P+ I G A A +AL V NKE + A+++ S K+ +S+ E G V + KG Sbjct: 11 ARSSMVRGVDILANTVKVTLGPKGRNVVLEKSFGSP--LITNDGVTIAKEIELEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVREGIKNVTAGANPIGIRRGIEAAVATAVEALKSNSVPVSNKE------AIAQVAAVSSRSEKVGEYISEAMEKVGNDGVITIEESKG 180
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: CH60_STRS7 (60 kDa chaperonin OS=Streptococcus equi subsp. zooepidemicus (strain H70) GN=groL PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.027e-12 Identity = 55/176 (31.25%), Postives = 87/176 (49.43%), Query Frame = 1 Query: 169 ARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSL----HIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDAL--LQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRLKGS 678 AR + G +AD VK TLGPKG + +L+ +TNDG TI K + H +N AK++ +++ +D GDGTT+ VL ++RE K V A +P+ I G A A +AL + + V KE + A+++ S K+ E ++ D V+ ++ S Sbjct: 11 ARESMVRGVDILADTVKVTLGPKGRNVVLEKAFGSP--LITNDGVTIAKEIELEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVREGLKNVTAGANPIGIRRGIEAATTTAVEALKAVAQPVSGKE------AIAQVAAVSSRSEKVGDYISEAMERVGNDGVITIEES 178
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: CH60_STRPZ (60 kDa chaperonin OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=groL PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.027e-12 Identity = 55/176 (31.25%), Postives = 86/176 (48.86%), Query Frame = 1 Query: 169 ARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSL----HIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDAL--LQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRLKGS 678 AR A G +AD VK TLGPKG + +L+ +TNDG TI K + H +N AK++ +++ +D GDGTT+ VL ++ E K V A +P+ I G A A +AL + + V KE + A+++ S K+ E ++ D V+ ++ S Sbjct: 11 ARAAMVRGVDMLADTVKVTLGPKGRNVVLEKAFGSP--LITNDGVTIAKEIELEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVHEGLKNVTAGANPIGIRRGIETATATAVEALKAIAQPVSGKE------AIAQVAAVSSRSEKVGEYISEAMERVGNDGVITIEES 178
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: CH60_STRPM (60 kDa chaperonin OS=Streptococcus pyogenes serotype M28 GN=groL PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.027e-12 Identity = 55/176 (31.25%), Postives = 86/176 (48.86%), Query Frame = 1 Query: 169 ARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSL----HIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDAL--LQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRLKGS 678 AR A G +AD VK TLGPKG + +L+ +TNDG TI K + H +N AK++ +++ +D GDGTT+ VL ++ E K V A +P+ I G A A +AL + + V KE + A+++ S K+ E ++ D V+ ++ S Sbjct: 13 ARAAMVRGVDMLADTVKVTLGPKGRNVVLEKAFGSP--LITNDGVTIAKEIELEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVHEGLKNVTAGANPIGIRRGIETATATAVEALKAIAQPVSGKE------AIAQVAAVSSRSEKVGEYISEAMERVGNDGVITIEES 180 The following BLAST results are available for this feature:
BLAST of FC929895 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929895 ID=FC929895; Name=FC929895; organism=Citrus clementina; type=EST; length=702bpback to top |