FC929895
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: TCPD_HUMAN (T-complex protein 1 subunit delta OS=Homo sapiens GN=CCT4 PE=1 SV=4) HSP 1 Score: 131.339 bits (329), Expect = 4.803e-30 Identity = 74/175 (42.29%), Postives = 114/175 (65.14%), Query Frame = 1 Query: 148 NEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAE-TFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRL 669 + +K + R ++ A A+AD ++T+LGPKGMDK++Q G+G +VT+TNDGATILK + + +PAA++LV++SK QD E GDGTTSVV++AG LL KL+ IHP I F+ A E ++ + D E + + L+ A T+L+SK++SQ ++V+AVM++ Sbjct: 26 DRDKPAQIRFSNISAAKAVADAIRTSLGPKGMDKMIQD-GKG-DVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKG----IEILTDMSRPVELSDRETLLNSATTSLNSKVVSQYSSLLSPMSVNAVMKV 194
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: THSB_THEAC (Thermosome subunit beta OS=Thermoplasma acidophilum GN=thsB PE=1 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.272e-30 Identity = 71/178 (39.89%), Postives = 119/178 (66.85%), Query Frame = 1 Query: 130 IFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKIL-QSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAV 660 I ++ E G+ A + A+AI++ V+++LGP+GMDK+L S G ++ +TNDG TILK + +++PAAK++V++SK QD VGDGTT+ V++AG LL++A+ L+ +HP I G+RMA+E A+ + + + K A+ K+ L+K+A T+L+SK S K+ +++ +AV Sbjct: 9 ILKEGTKRESGKDAMKENIEAAIAISNSVRSSLGPRGMDKMLVDSLG---DIVITNDGVTILKEMDVEHPAAKMMVEVSKTQDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRVIDE--ISTKIGADE-KALLLKMAQTSLNSKSASVAKDKLAEISYEAV 180
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: THSA_SULSO (Thermosome subunit alpha OS=Sulfolobus solfataricus GN=thsA PE=3 SV=2) HSP 1 Score: 130.568 bits (327), Expect = 8.192e-30 Identity = 77/186 (41.40%), Postives = 118/186 (63.44%), Query Frame = 1 Query: 130 IFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKIL-QSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDAL--LQKVVDNKE-NAETFKSDLMKIAMTTLSSKILSQDKE--HFGQLAVDAVMRL 669 + ++ + G A + + A +A++++++LGPKG+DK+L S G +VT+TNDGATI+K + I +PAAK+LV+ +K QD EVGDGTTS VVLAG LL +AE L+ IHP II G++ A A + L L +D K+ N+ + L KIA TTL+SK +++ E + +DA++ + Sbjct: 7 LLKEGTSRTTGRDALRNNILAAKTLAEMLRSSLGPKGLDKMLIDSFG---DVTITNDGATIVKDMEIQHPAAKLLVEAAKAQDAEVGDGTTSAVVLAGALLEKAESLLDQNIHPTIIIEGYKKAYNKALELLPQLGTRIDIKDLNSSVARDTLRKIAFTTLASKFIAEGAELNKIIDMVIDAIVNV 189
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: TCPD_PONAB (T-complex protein 1 subunit delta OS=Pongo abelii GN=CCT4 PE=2 SV=3) HSP 1 Score: 130.568 bits (327), Expect = 8.192e-30 Identity = 74/175 (42.29%), Postives = 113/175 (64.57%), Query Frame = 1 Query: 148 NEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAE-TFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVMRL 669 + +K + R ++ A A+AD ++T+LGPKGMDK++Q G+G +VT+TNDGATILK + + +PAA++LV++SK QD E GDGTTSVV++AG LL KL+ IHP I F+ A E ++ + D E + + L+ A T+L+SK+ SQ ++V+AVM++ Sbjct: 26 DRDKPAQIRFSNISAAKAVADAIRTSLGPKGMDKMIQD-GKG-DVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKG----IEILTDMSRPVELSDRETLLNSATTSLNSKVASQYSSLLSPMSVNAVMKV 194
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: TCPE_PONAB (T-complex protein 1 subunit epsilon OS=Pongo abelii GN=CCT5 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.070e-29 Identity = 73/176 (41.48%), Postives = 111/176 (63.07%), Query Frame = 1 Query: 136 RDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVM 663 +D + G A + + A A+A+ ++T+LGP G+DK++ + +VTVTNDGATIL + +D+ AK++V++SK QDDE+GDGTT VVVLAG LL EAE+L+ IHP+ I G+ AA A + L K+ D+ L++ A TTL SK+++ ++AV+AV+ Sbjct: 22 QDRKSRLMGLEALKSHIMAAKAVANTMRTSLGPNGLDKMM--VDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARVAIEH-LDKISDSVLVDIKDTEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVL 194
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: TCPE_MACFA (T-complex protein 1 subunit epsilon OS=Macaca fascicularis GN=CCT5 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.070e-29 Identity = 73/176 (41.48%), Postives = 111/176 (63.07%), Query Frame = 1 Query: 136 RDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVM 663 +D + G A + + A A+A+ ++T+LGP G+DK++ + +VTVTNDGATIL + +D+ AK++V++SK QDDE+GDGTT VVVLAG LL EAE+L+ IHP+ I G+ AA A + L K+ D+ L++ A TTL SK+++ ++AV+AV+ Sbjct: 22 QDRKSRLMGLEALKSHIMAAKAVANTMRTSLGPNGLDKMM--VDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARVAIEH-LDKISDSVLVDIKDTEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVL 194
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: TCPE_HUMAN (T-complex protein 1 subunit epsilon OS=Homo sapiens GN=CCT5 PE=1 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.070e-29 Identity = 73/176 (41.48%), Postives = 111/176 (63.07%), Query Frame = 1 Query: 136 RDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLMKIAMTTLSSKILSQDKEHFGQLAVDAVM 663 +D + G A + + A A+A+ ++T+LGP G+DK++ + +VTVTNDGATIL + +D+ AK++V++SK QDDE+GDGTT VVVLAG LL EAE+L+ IHP+ I G+ AA A + L K+ D+ L++ A TTL SK+++ ++AV+AV+ Sbjct: 22 QDRKSRLMGLEALKSHIMAAKAVANTMRTSLGPNGLDKMM--VDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARVAIEH-LDKISDSVLVDIKDTEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVL 194
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: THSA_SULSH (Thermosome subunit alpha OS=Sulfolobus shibatae GN=thsA PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.383e-29 Identity = 75/186 (40.32%), Postives = 116/186 (62.37%), Query Frame = 1 Query: 130 IFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKIL-QSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQ---KVVDNKENAETFKSDLMKIAMTTLSSKILSQDKE--HFGQLAVDAVMRL 669 + ++ + G A + + A +A++++++LGPKG+DK+L S G +VT+TNDGATI+K + I +PAAK+LV+ +K QD EVGDGTTS VVLAG LL +AE L+ IHP II G++ A A + L Q ++ N+ + L KIA TTL+SK +++ E + +DA++ + Sbjct: 7 LLKEGTSRTTGRDALRNNILAAKTLAEMLRSSLGPKGLDKMLIDSFG---DVTITNDGATIVKDMEIQHPAAKLLVEAAKAQDAEVGDGTTSAVVLAGALLEKAESLLDQNIHPTIIIEGYKKAYTKALELLPQLGTRIDIRDLNSSVARDTLRKIAFTTLASKFIAEGAELNKIIDMVIDAIVNV 189
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: TCPH_SCHPO (Probable T-complex protein 1 subunit eta OS=Schizosaccharomyces pombe GN=cct7 PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.383e-29 Identity = 75/181 (41.44%), Postives = 113/181 (62.43%), Query Frame = 1 Query: 130 IFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSDLM-KIAMTTLSSKILSQDKEHFGQLAVDAVMRL 669 + ++ ++ +G +++ +A+ D ++TTLGP G DK++ RG EV ++NDGATI+K L I +PAAK LVDI++ QD EVGDGTTSVVV AGELLREA V + II G+R AA+ A + + + + + E DL+ K A T ++SK++ + F ++ VDAV+ L Sbjct: 12 VLKEGTDDSQGRGQLLSNINACVAVQDTIRTTLGPLGADKLMVDD-RG-EVVISNDGATIMKLLDIVHPAAKTLVDIARAQDAEVGDGTTSVVVFAGELLREARTFVEDGVSSHLIIRGYRKAAQLAVNKIKEIAIHLDLSDEGKLRDLLTKCASTAMNSKLIRSNSTFFTKMVVDAVLTL 190
BLAST of FC929895 vs. ExPASy Swiss-Prot
Match: THSA_AERPE (Thermosome subunit alpha OS=Aeropyrum pernix GN=thsA PE=3 SV=2) HSP 1 Score: 128.642 bits (322), Expect = 3.113e-29 Identity = 76/181 (41.99%), Postives = 115/181 (63.54%), Query Frame = 1 Query: 130 IFRDEANEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGREVTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVAAKIHPMTIISGFRMAAECARDALLQKVVDNKENAETFKSD--LMKIAMTTLSSKIL--SQDKEHFGQLAVDAV 660 I ++ G A A+ + A +A+++K++LGP+G+DK+L ++TVTNDGATI+K + I +PAAK+LV+++K QD EVGDGTTSVVVLAG LL +AEKL+ +HP II G+ A E +AL ++VD + D L +IA TTL+SK + +++ + +DA+ Sbjct: 10 ILKEGTQRTYGREALRANILAARVLAEMLKSSLGPRGLDKMLVDAFG--DITVTNDGATIVKEMEIQHPAAKLLVEVAKAQDAEVGDGTTSVVVLAGALLEKAEKLLDENLHPTIIIEGYTKAME---EAL--RLVDEAAVPVEVEDDSVLRRIAETTLASKFVGTGPERDKIISMVIDAI 183 The following BLAST results are available for this feature:
BLAST of FC929895 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929895 ID=FC929895; Name=FC929895; organism=Citrus clementina; type=EST; length=702bpback to top |