FC929949

Overview
NameFC929949
Unique NameFC929949
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length704
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC929949 vs. ExPASy Swiss-Prot
Match: THRC_BACHD (Threonine synthase OS=Bacillus halodurans GN=thrC PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.113e-29
Identity = 83/222 (37.39%), Postives = 129/222 (58.11%), Query Frame = 3 
Query:   24 WVKHCGISHTGSFKDLGMTVLVSQVNRLKKMNKPVIGVGCASTGDTSAALSAYCASAGVPSIVFLPANKISIAQLVQPIANGAFVLSLDTDFDGCMQLIREVTSELPIYLANSLNSLRLEGQKTAAIEILQQFDWEVPDWVIVPGGNLGNIYAFYKGFQMCKELGLVDRIPRLVCAQAANANPLYLYYKSGWKDFKPVRANTTFASAIQIGDPVSIDRAVYA 689
            +VK+ G + TGSFKD GM + V++    ++ ++ +I   CASTG+TSAA +AY A AG+  IV +P  KI++ +L Q +  GA VL +  +FD  + ++R ++ + PI L NS+N  R+EGQKT+A EI      + PD + +P GN GNI A++KGF+   E      +P++   +A  A  +           + +    T A+AI+IG+P S   AV A
Sbjct:   48 YVKYEGANPTGSFKDRGMVMAVAKAK--EEGSRTII---CASTGNTSAAAAAYGARAGLRCIVVIPEGKIALGKLAQAVMYGAEVLEIKGNFDHALDIVRSISEKEPITLVNSVNPYRIEGQKTSAFEICDALG-QAPDVLAIPVGNAGNITAYWKGFKEYHEKKGTG-LPQMRGFEAEGAAAIVRN--------QVIEEPETIATAIRIGNPASWTYAVEA 254
The following BLAST results are available for this feature:
BLAST of FC929949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
THRC_BACHD3.113e-2937.39Threonine synthase OS=Bacillus halodurans GN=thrC ... [more]

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Properties
Property NameValue
Genbank descriptionC34002B08EF PostHarvC1 Citrus clementina cDNA clone C34002B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929949 ID=FC929949; Name=FC929949; organism=Citrus clementina; type=EST; length=704bp
AGTTTTTGCAAATGAATGATTTGTGGGTTAAGCACTGTGGGATTAGTCAT
ACAGGAAGTTTTAAGGATCTGGGTATGACTGTTTTGGTGAGTCAAGTGAA
TAGGTTAAAGAAAATGAACAAACCGGTTATTGGGGTTGGCTGTGCTTCAA
CTGGCGATACCTCAGCTGCTCTGTCAGCTTATTGTGCCTCTGCTGGCGTT
CCTTCTATTGTGTTTTTGCCCGCTAATAAGATTTCAATTGCCCAGTTAGT
GCAGCCTATTGCAAATGGTGCTTTTGTTTTGAGTCTTGATACTGATTTTG
ATGGCTGCATGCAGTTGATAAGGGAAGTTACTTCTGAGTTGCCTATTTAT
TTAGCTAATTCTTTGAATAGTTTGAGGTTAGAGGGACAAAAGACTGCTGC
TATTGAGATATTGCAGCAGTTTGATTGGGAAGTTCCCGATTGGGTGATAG
TTCCTGGTGGTAATTTGGGAAATATATATGCTTTTTATAAAGGGTTTCAA
ATGTGCAAAGAGTTAGGGCTTGTTGATAGGATTCCTCGGCTTGTATGTGC
ACAAGCTGCAAATGCAAACCCACTTTACTTGTATTATAAGTCAGGGTGGA
AAGATTTTAAGCCTGTCAGGGCAAATACTACTTTTGCATCTGCTATTCAG
ATTGGTGATCCTGTTTCTATTGACAGAGCTGTTTATGCCTTGAAAATTGT
GATG
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