FC929955

Overview
NameFC929955
Unique NameFC929955
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length701
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: NCB5R_SCHPO (NADH-cytochrome b5 reductase 1 OS=Schizosaccharomyces pombe GN=cbr1 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.422e-35
Identity = 66/135 (48.89%), Postives = 99/135 (73.33%), Query Frame = 1
Query:  295 DSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPP 699
            D  G+E  + YTP + D+D G+F+L++K YP G++S  F E+++GD + V+GPKG ++++ G  R FGM AGG+GITPM Q+ RA+L N  D T++ L+YANV+  DI+L++E+D  A K P +FT++YVLN PP
Sbjct:  103 DVDGKEYSRSYTPLSSDADKGYFDLLVKSYPNGKVSKKFSELKIGDTIGVRGPKGNWKHRTGLARHFGMIAGGTGITPMLQIIRAVLSNFEDPTEITLLYANVSEGDIVLRDEIDALAKKDP-RFTVHYVLNNPP 236          
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: NCB5R_COCIM (NADH-cytochrome b5 reductase 1 OS=Coccidioides immitis GN=CBR1 PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.431e-34
Identity = 72/138 (52.17%), Postives = 94/138 (68.12%), Query Frame = 1
Query:  301 QGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILE-----NPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPP 699
            Q +E+++ YTP + D D G+F+L++K YPQG +S H   +R+GD + V+GPKG   Y P  VR  GM AGG+GITPM QV +AI++       ND T++ LI+ANV  +DILLKEELD   AK  D F IYYVLN PP
Sbjct:  107 QSKEIVRSYTPISSDDDAGYFDLLVKSYPQGNISKHLTTLRIGDKMKVRGPKGAMVYTPNMVRHIGMIAGGTGITPMLQVIKAIIKGRPRNGGNDTTQIDLIFANVNPDDILLKEELDQL-AKEDDAFRIYYVLNNPP 243          
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: NCB5R_NEOFI (NADH-cytochrome b5 reductase 1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=cbr1 PE=3 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 2.440e-34
Identity = 70/140 (50.00%), Postives = 97/140 (69.29%), Query Frame = 1
Query:  295 DSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEN-----PNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPP 699
            + Q +EV++ YTP + D++ G+F+L++K YPQG +S +   +++GD + V+GPKG   Y P   R  GM AGG+GITPM Q+ +A++ N      ND TK+ LI+ANV  +DILLKEELD  AA+ PD F IYYVLN PP
Sbjct:  106 EGQPKEVVRSYTPISSDNEAGYFDLLVKAYPQGNISKYLTTLKIGDTMKVRGPKGAMVYTPNMCRHIGMIAGGTGITPMLQIIKAVIRNRPRNGGNDTTKLDLIFANVNPDDILLKEELDKLAAEDPD-FNIYYVLNNPP 244          
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: NCB5R_ASPCL (NADH-cytochrome b5 reductase 1 OS=Aspergillus clavatus GN=cbr1 PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.440e-34
Identity = 74/140 (52.86%), Postives = 95/140 (67.86%), Query Frame = 1
Query:  295 DSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEN-----PNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPP 699
            + Q +EV++ YTP + D++ G+F+L++K YPQG +S H   ++VGD + V+GPKG   Y P   R  GM AGG+GITPM QV +AI+ N       D TKV LI+ANV  EDILLKEELD  AA+  D F IYYVLN PP
Sbjct:  106 EGQPKEVVRSYTPISSDNEAGYFDLLVKAYPQGNISKHLTTLKVGDVMKVRGPKGAMVYTPNMCRHIGMIAGGTGITPMLQVIKAIIRNRPRNGGTDITKVDLIFANVNPEDILLKEELDKLAAEDED-FNIYYVLNNPP 244          
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: NCB5R_ASHGO (NADH-cytochrome b5 reductase 1 OS=Ashbya gossypii GN=CBR1 PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.440e-34
Identity = 67/131 (51.15%), Postives = 94/131 (71.76%), Query Frame = 1
Query:  304 GEEVIKPYTPTTLDSDV-GHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQ 693
            G+E+++ YTPT+LDSD  G+FEL++K Y +G +S    E+ +GD + V+GPKG + Y+P   +  GM AGG+GI+PM+Q+ RAI  NP DKT+V L+Y N T +DILLK ELD   A  PDQF I Y+L++
Sbjct:   88 GKEMLRSYTPTSLDSDATGYFELLVKSYEKGNISKMLAELAIGDRIKVRGPKGFYHYEPNMYKEIGMIAGGTGISPMYQIIRAIFSNPRDKTRVCLVYGNQTKDDILLKPELDAMVAAKPDQFKILYMLDK 218          
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: NCB5R_ASPFU (NADH-cytochrome b5 reductase 1 OS=Aspergillus fumigatus GN=cbr1 PE=3 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 3.187e-34
Identity = 70/140 (50.00%), Postives = 97/140 (69.29%), Query Frame = 1
Query:  295 DSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEN-----PNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPP 699
            + Q +EV++ YTP + D++ G+F+L++K YPQG +S +   +++GD + V+GPKG   Y P   R  GM AGG+GITPM Q+ +A++ N      ND TK+ LI+ANV  +DILLKEELD  AA+ PD F IYYVLN PP
Sbjct:  106 EGQPKEVVRSYTPISSDNEAGYFDLLVKAYPQGNISKYLTTLKIGDTMKVRGPKGAMVYTPNMCRHIGMIAGGTGITPMLQIIKAVIRNRPRNGGNDTTKLDLIFANVNPDDILLKEELDMLAAEDPD-FNIYYVLNNPP 244          
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: NCB5R_YARLI (NADH-cytochrome b5 reductase 1 OS=Yarrowia lipolytica GN=CBR1 PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.163e-34
Identity = 70/133 (52.63%), Postives = 96/133 (72.18%), Query Frame = 1
Query:  304 GEEVIKPYTPTTLDS-DVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPP 699
            G+EV++ YTPT+ D  D G+F+++IK YPQG +S +  E+ +GD + V+GPKG F Y  G V +FGM  GG+GITPM+Q+ R I  +P D TKV+L+YANV ++DILLK+ELD  AA+  D   I+YVLN  P
Sbjct:   94 GKEVLRSYTPTSSDLYDKGYFDILIKTYPQGNISKYVSELAIGDTMKVRGPKGNFVYNHGLVESFGMVCGGTGITPMYQILRHIAADPADNTKVNLVYANVNHDDILLKKELDAIAAE-NDNIKIHYVLNNAP 225          
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: NCB5R_PHANO (NADH-cytochrome b5 reductase 1 OS=Phaeosphaeria nodorum GN=CBR1 PE=3 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 4.163e-34
Identity = 72/137 (52.55%), Postives = 95/137 (69.34%), Query Frame = 1
Query:  295 DSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAIL--ENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPP 699
            + Q +EV++ YTP + D D GHF+L+IK YP G +S +   ++VG+ + VKGPKG   Y P  VR FGM +GG+GITPM QV +AI+      D T+V LI+ANV  EDILLKE+LD  AAK P +F ++YVLN PP
Sbjct:   82 EGQPKEVVRSYTPISSDEDKGHFDLLIKSYPTGNISKYVANLKVGEKMRVKGPKGAMVYTPNMVRHFGMISGGTGITPMLQVVKAIIRGRGQGDTTEVDLIFANVNPEDILLKEDLDALAAKDP-KFRVHYVLNNPP 217          
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: MCR1_USTMA (NADH-cytochrome b5 reductase 2 OS=Ustilago maydis GN=MCR1 PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 9.274e-34
Identity = 69/136 (50.74%), Postives = 94/136 (69.12%), Query Frame = 1
Query:  292 KDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPP 699
            KD QG++VI+PYTP T    VGH + ++K YP G+M+ +   M+ GD L +KGP  +F Y+  +  + GM AGGSGITPM+QV + I  NP+DKTKV LIY+N T +DILL+E+ D  A K  D+FTI Y L++ P
Sbjct:  144 KDDQGKDVIRPYTPITSPDTVGHMDFLVKKYPGGKMTTYMHSMKPGDKLGIKGPIAKFAYKANEFESIGMIAGGSGITPMYQVIQDIASNPSDKTKVTLIYSNKTEQDILLREQFDQLAKK-DDRFTIIYGLDKLP 278          
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: NCB5R_CRYNE (NADH-cytochrome b5 reductase 1 OS=Cryptococcus neoformans GN=CBR1 PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.211e-33
Identity = 64/132 (48.48%), Postives = 92/132 (69.70%), Query Frame = 1
Query:  304 GEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPP 699
            G++V++ YTPTTLD D GHF+LV+K Y +G +S +   + +G  + VKGPKG+F Y P       M AGG+GITPM+Q+ ++ ++ P DKT++ LIYAN+  +DILLK+E+D   AK   +F + YVLN PP
Sbjct:   91 GKQVVRSYTPTTLDDDKGHFDLVVKTYEKGNISRYLSLLTIGQEIKVKGPKGKFVYTPNMAPHLVMIAGGTGITPMYQIIKSSIKTPGDKTRLSLIYANIQEDDILLKKEIDELQAKSNGRFDVKYVLNNPP 222          
The following BLAST results are available for this feature:
BLAST of FC929955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 120
Match NameE-valueIdentityDescription
NCB5R_SCHPO6.422e-3548.89NADH-cytochrome b5 reductase 1 OS=Schizosaccharomy... [more]
NCB5R_COCIM1.431e-3452.17NADH-cytochrome b5 reductase 1 OS=Coccidioides imm... [more]
NCB5R_NEOFI2.440e-3450.00NADH-cytochrome b5 reductase 1 OS=Neosartorya fisc... [more]
NCB5R_ASPCL2.440e-3452.86NADH-cytochrome b5 reductase 1 OS=Aspergillus clav... [more]
NCB5R_ASHGO2.440e-3451.15NADH-cytochrome b5 reductase 1 OS=Ashbya gossypii ... [more]
NCB5R_ASPFU3.187e-3450.00NADH-cytochrome b5 reductase 1 OS=Aspergillus fumi... [more]
NCB5R_YARLI4.163e-3452.63NADH-cytochrome b5 reductase 1 OS=Yarrowia lipolyt... [more]
NCB5R_PHANO4.163e-3452.55NADH-cytochrome b5 reductase 1 OS=Phaeosphaeria no... [more]
MCR1_USTMA9.274e-3450.74NADH-cytochrome b5 reductase 2 OS=Ustilago maydis ... [more]
NCB5R_CRYNE1.211e-3348.48NADH-cytochrome b5 reductase 1 OS=Cryptococcus neo... [more]

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Properties
Property NameValue
Genbank descriptionC34002C03EF PostHarvC1 Citrus clementina cDNA clone C34002C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929955 ID=FC929955; Name=FC929955; organism=Citrus clementina; type=EST; length=701bp
GAGAGCACCAGAAGATAAGAAATGGAATAAACCGCACACTATTTTCTCTC
CCACCCATTTACTGGTTCCATTTCTTGTTTTGATTTTTGAGTTAAAAATT
TATTCTCTATATACATATATTGATAAATCCGAGGCTTTTAGTTCTTCTAT
TGGTGAGCTTTTCTGTATCATCATGGATATGGAATATCTGCAGAACTTAG
ATGTTCAGCTTCTCGTTGGTGGAGCTGTGGCTGTTTTGGCCATTGCTGTT
GGTGCTGCTTACTTGTATTCCTCTAAGAAGCCCAAAGGGGCAAGGATAGT
CAGGGTGAAGAGGTTATTAAACCATATACCCCAACCACATTGGATTCTGA
TGTTGGTCATTTTGAATTGGTTATTAAGATGTACCCCCAAGGAAGGATGT
CACACCATTTCCGTGAGATGCGTGTTGGTGATTATCTTGCCGTGAAGGGA
CCCAAGGGTCGATTCAGGTATCAACCTGGCCAGGTCAGAGCATTTGGGAT
GACTGCAGGAGGTTCTGGCATCACTCCAATGTTCCAAGTTACTAGAGCCA
TATTAGAGAACCCAAATGACAAGACAAAGGTGCACCTCATTTATGCCAAT
GTTACATATGAGGACATTCTTTTAAAGGAAGAATTGGATGGATTTGCGGC
GAAGTACCCTGATCAATTCACAATCTACTATGTGTTGAATCAGCCTCCTG
A
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